BAC Information

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BAC

Clone NameB6Ng01-027G07
Chromosome16 (Build37)
Map Location 95,766,698 - 95,943,412
singlet/doubletdoublet
Overlap geneEts2
Upstream geneDyrk1a, Kcnj6, LOC666201, Kcnj15, Erg
Downstream geneLOC625548, LOC100040997, Dscr2, Brwd1, LOC100041318, Hmgn1, Wrb, 4921526F01Rik, Sh3bgr, B3galt5, Jam4, Itgb2l, Pcp4, Dscam
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027G07.bB6Ng01-027G07.g
ACCDH858147DH858148
length401437
definitionDH858147|Mus musculus domesticus DNA, BAC clone: B6Ng01-027G07, 5' end.DH858148|Mus musculus domesticus DNA, BAC clone: B6Ng01-027G07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,943,008 - 95,943,412)(95,766,698 - 95,767,140)
sequence
ttaacattaaaaaaaaaatcaacccccatgttgtgtacaccacatgcttg
cattgccatagaagagggtgttgtgtcctttggaactggtgttacagatg
gttgtgagcttccaggtgggtgctgggaaccaaacctaagtcctctgcaa
gatcaacaagtgctcttaacctctcttgctctgatttaacttttaaattt
ttaatttgtaatacaataaccaattggtgttttccaagtgtttgccacca
gctccctgatgggtatggggcactgatttcagcccctgctgaatgttaat
acagttgggacacttgtaaagaggcatgggtgtggtttctcagtatcttt
gtggacatgtcctaggagccagatcatgcaccctgagactactagccaca
t
ccgcttagagagaccctgtctcaaaaagtaaaaagaaattgagaaagaca
acctggacagagttaaagaggggactacgtcccgcaggtccttgacagtt
cagtgtatatgggaggtagtgattgggactgggaaggcagagaattgtgg
agcagcaaaggcttgaatttccgatgaaagcagtgcagaccaacacagag
aagaaggaattacagttgtctccgtgctgacaagacaatgaatttttgat
ccatactctgttgtgtgagaaaagaatgttgaacaggaacaggccctcac
cttctggtgaccatagcgattaaatgtgccctcggaagcctccggagcaa
cgcaaccctgaccacatgggttctctcccctttctgaagagttctgggca
tgatacaaggaactgctttctgtctctttggccaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_95943008_95943412
seq2: B6Ng01-027G07.b_34_440 (reverse)

seq1  ATGTGGCTAGTAGTCTCAGGGTGCATGCTCTGGCTCCTAGGACATGTCCA  50
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATGTGGCTAGTAGTCTCAGGGTGCATGATCTGGCTCCTAGGACATGTCCA  50

seq1  CAAAGATACTGAGAAACCACACCCATGCCTCTTTACAAGTGTCCCAACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATACTGAGAAACCACACCCATGCCTCTTTACAAGTGTCCCAACTG  100

seq1  TATTAACATTCAGCAGGGGCTGAAATCAGTGCCCCATACCCATCAGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACATTCAGCAGGGGCTGAAATCAGTGCCCCATACCCATCAGGGAG  150

seq1  CTGGTGGCAAACACTTGGAAAACACCAATTGGTTATTGTATTACAAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGCAAACACTTGGAAAACACCAATTGGTTATTGTATTACAAATTA  200

seq1  AAAATTTAAAAGTTAAATCAGAGCAAGAGAGGTTAAGAGCACTTGTTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTAAAAGTTAAATCAGAGCAAGAGAGGTTAAGAGCACTTGTTGAT  250

seq1  CTTGCAGAGGACTTAGGTTTGGTTCCCAGCACCCACCTGGAAGCTCACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGAGGACTTAGGTTTGGTTCCCAGCACCCACCTGGAAGCTCACAA  300

seq1  CCATCTGTAACACCAGTTCCAAAGGACACAACACCCTCTTCTATGGCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGTAACACCAGTTCCAAAGGACACAACACCCTCTTCTATGGCAAT  350

seq1  GCAAGCATGTGGTGTACAC-ACAT-GCAGTTGATTTTTTTTTTAATGTTA  398
      ||||||||||||||||||| |||| |  ||||||||||||||||||||||
seq2  GCAAGCATGTGGTGTACACAACATGGGGGTTGATTTTTTTTTTAATGTTA  400

seq1  AGAATTC  405
      |||||||
seq2  AGAATTC  407

seq1: chr16_95766698_95767140
seq2: B6Ng01-027G07.g_65_507

seq1  GAATTCCAAGCCCAGAGAGACCCTGTCTCAAAAAGTAAAAAGAAATTGAG  50
      |||||||  ||  |||||||||||||||||||||||||||||||||||||
seq2  GAATTCC-CGCTTAGAGAGACCCTGTCTCAAAAAGTAAAAAGAAATTGAG  49

seq1  AAAGACAACCTGGACAGAGTTAAAGAGGGGACTACGTCCCGCAGGTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAACCTGGACAGAGTTAAAGAGGGGACTACGTCCCGCAGGTCCTT  99

seq1  GACAGTTCAGTGTATATGGGAGGTAGTGATTGGGACTGGGAAGGCAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTCAGTGTATATGGGAGGTAGTGATTGGGACTGGGAAGGCAGAGA  149

seq1  ATTGTGGAGCAGCAAAGGCTTGAAGTTCCGATGAAAGCAGTGCAGACCAA  200
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATTGTGGAGCAGCAAAGGCTTGAATTTCCGATGAAAGCAGTGCAGACCAA  199

seq1  CACAGAGAAGAAGGAATTACAGTTGTCTCCGTGCTGACAAGACAATGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CACAGAGAAGAAGGAATTACAGTTGTCTCCGTGCTGACAAGACAATGAAT  249

seq1  TTTTGATCCAGACTCTGTGGTGTGAGAAAAGAATGCTGAACAGGAACAGG  300
      |||||||||| ||||||| |||||||||||||||| ||||||||||||||
seq2  TTTTGATCCATACTCTGTTGTGTGAGAAAAGAATGTTGAACAGGAACAGG  299

seq1  CCCTCACCTTCTGGTGACCATAGCGATTAAATGTGCCCTCGGAAGCCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACCTTCTGGTGACCATAGCGATTAAATGTGCCCTCGGAAGCCTCC  349

seq1  GGAGCAACGCAACCCTGACCACATGGTTTCTCTCCCCTTCCTGAAGAGTT  400
      |||||||||||||||||||||||||| |||||||||||| ||||||||||
seq2  GGAGCAACGCAACCCTGACCACATGGGTTCTCTCCCCTTTCTGAAGAGTT  399

seq1  CTGGGCATGATACAAGGAACTGC-TTCGGTCTCTTTGGCCAAGG  443
      ||||||||||||||||||||||| ||| ||||||||||||||||
seq2  CTGGGCATGATACAAGGAACTGCTTTCTGTCTCTTTGGCCAAGG  443