BAC Information

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BAC

Clone NameB6Ng01-028A18
Chromosome16 (Build37)
Map Location 70,242,191 - 70,395,370
singlet/doubletdoublet
Overlap geneGbe1
Upstream geneSpeer2, EG664930
Downstream geneD16Ertd519e, LOC100039231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028A18.bB6Ng01-028A18.g
ACCDH858630DH858631
length1,1561,054
definitionDH858630|Mus musculus domesticus DNA, BAC clone: B6Ng01-028A18, 5' end.DH858631|Mus musculus domesticus DNA, BAC clone: B6Ng01-028A18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,242,191 - 70,243,353)(70,394,311 - 70,395,370)
sequence
gaattcttccccactcatgtctcaaaatggaagcacagtcaagcaactct
cttgactgtggcgtcctgaaatccagtacagagacctcagttaagccttg
tccagagacttgacttatagaaaactataaaaatactaacacaggataac
aaagctttgatttacaagtactaatgtacatataaatggatgaaacggac
tgagacgattcttgatgaaatccaaaaccgtagctctataacatgtgatg
tgtttggccattcttcctttagtggcagagaaaacacagctccacgagtg
ataaagggcagaatgaatgtctacataaaggaatagcaatatatgatctg
cttaactaattttaggaaaaaaaaaaaaaggaaacttgaagtgtgtgcta
tgcctacttacctacacattaccaaccatgagttgggcatggtagaaact
attctgtgaataaataaaaggtgtttaaattgaaataatcagcctaggac
tgaggaagcctacagggtacactactggaggtgaagtctaggaaatttaa
gtattctctaggacctacaagtaatttacaaacaatattcagaaaagtca
atgtgttctatagaacttcaaagaagaaaaaaaatagccagacataccag
acacatgcttttctatgcaatttctatgtggccaagcatatatatagtta
cactatgtcgttttagtagtctgccactgtctgttacaataatttacttt
gtgctcctcatccctgcacttgccattccatcttccaaggtcagctggag
gacttttggggaacaagcttgagatttctgttactaggaactccctcact
catagttacttatgagatttaacaaatctccagcaaaatggttctcccat
actctttccctttaaagaataaacaaaccaaagaacactagaatgggaat
cagaaggagcaggcttgcgcactttagcattttttcctatcaatgtagac
agaacctcatagcacaaggaaactaggaacataaaatgttggggactttg
tagaggtgtaagcagaacgagcaataaaggtcgttcaagtagactgtctt
cccacttatttctgaactattaataaataattaatctgagactcatgcaa
tggcta
gaattcattcttcatagctctctcagtaggttatttcaatgattttttga
tgctctgaggattctgaacatcccacctcggcccttttgtttccaacatt
caaacacaataaattggtacagtgaggcaaatttttcttcacatccaaga
tatgaagtgcacatcctgggcactgacagcccaggttctcaaattcttcc
tccatttcttcagatcagatcagtgcctaaaatggcccaagctgaattcc
tggtgatttccagatttccaattcccaattcttactctcagatttcaact
tacttacattctcagtggaacacttggccaagcctccttaggctccagta
agctactccagtcactgctctgaaaccacagtggtgcaaggaataagagt
gtgtgcatatttgaaagctaggtcagctaatatagataagaagcagtgag
tgttagttagtagagctatcaacagaagaaacccggtagaggtctcgcag
acactcccacacacgtgctcggacacatagagatacgcatgaataagtaa
ttaaatacgtctttggggggaagaagtattaggacagaagtgaatgaagg
acagccttttctttataaatgcacttcaggaaggagagatgtggcaattc
tatatacagagtggaagcagcatagaaagaggaaatgagcacagatttac
actgtcaaacaggcaagggtaaaaaggagtgaatgcattgatctgtaaca
tcactttttatattaacttttataagcacatataaatacaaacagcattg
aagagggacacttggtggcttttgaaatgttacctttcacctggcttctg
ttctctcagagaaatcagactaagtgctacgataaagagaacagtgccat
ggtaaataagagcaggatcccagacagtgtgaggaaaataaatagatagg
tagagagtggagagagtggagtcaggagtgtgcaatcgattccttgcagt
tggcaaccatgaatctatccggaaaagcgtgctgccaagaacatgtgatt
tttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_70242191_70243353
seq2: B6Ng01-028A18.b_44_1199

seq1  GAATTCTTCCCCACTCATGTCTCAAAATGGAAGCACAGTCAAGCAACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCCCACTCATGTCTCAAAATGGAAGCACAGTCAAGCAACTCT  50

seq1  CTTGACTGTGGCGTCCTGAAATCCAGTACAGAGACCTCAGTTAAGCCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTGTGGCGTCCTGAAATCCAGTACAGAGACCTCAGTTAAGCCTTG  100

seq1  TCCAGAGACTTGACTTATAGAAAACTATAAAAATACTAACACAGGATAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGACTTGACTTATAGAAAACTATAAAAATACTAACACAGGATAAC  150

seq1  AAAGCTTTGATTTACAAGTACTAATGTACATATAAATGGATGAAACGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTTGATTTACAAGTACTAATGTACATATAAATGGATGAAACGGAC  200

seq1  TGAGACGATTCTTGATGAAATCCAAAACCGTAGCTCTATAACATGTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACGATTCTTGATGAAATCCAAAACCGTAGCTCTATAACATGTGATG  250

seq1  TGTTTGGCCATTCTTCCTTTAGTGGCAGAGAAAACACAGCTCCACGAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGCCATTCTTCCTTTAGTGGCAGAGAAAACACAGCTCCACGAGTG  300

seq1  ATAAAGGGCAGAATGAATGTCTACATAAAGGAATAGCAATATATGATCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGGCAGAATGAATGTCTACATAAAGGAATAGCAATATATGATCTG  350

seq1  CTTAACTAATTTTAGGAAAAAAAAAAAAAGGAAACTTGAAGTGTGTGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTAATTTTAGGAAAAAAAAAAAAAGGAAACTTGAAGTGTGTGCTA  400

seq1  TGCCTACTTACCTACACATTACCAACCATGAGTTGGGCATGGTAGAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACTTACCTACACATTACCAACCATGAGTTGGGCATGGTAGAAACT  450

seq1  ATTCTGTGAATAAATAAAAGGTGTTTAAATTGAAATAATCAGCCTAGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTGAATAAATAAAAGGTGTTTAAATTGAAATAATCAGCCTAGGAC  500

seq1  TGAGGAAGCCTACAGGGTACACTACTGGAGGTGAAGTCTAGGAAATTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAGCCTACAGGGTACACTACTGGAGGTGAAGTCTAGGAAATTTAA  550

seq1  GTATTCTCTAGGACCTACAAGTAATTTACAAACAATATTCAGAAAAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTCTAGGACCTACAAGTAATTTACAAACAATATTCAGAAAAGTCA  600

seq1  ATGTGTTCTATAGAACTTCAAAGAAGAAAAAAAATAGCCAGACATACCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTCTATAGAACTTCAAAGAAGAAAAAAAATAGCCAGACATACCAG  650

seq1  ACACATGCTTTTCTATGCAATTTCTATGTGGCCAAGCATATATATAGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGCTTTTCTATGCAATTTCTATGTGGCCAAGCATATATATAGTTA  700

seq1  CACTATGTCGTTTTAGTAGTCTGCCACTGTCTGTTACAATAATTTACTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGTCGTTTTAGTAGTCTGCCACTGTCTGTTACAATAATTTACTTT  750

seq1  GTGCTCCTCATCCCTGCACTTGCCATTCCATCTTCCAAGGTCAGCTGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCCTCATCCCTGCACTTGCCATTCCATCTTCCAAGGTCAGCTGGAG  800

seq1  GACTTTTGGGGAACAAGCTTGAGATTTCTGTTACTAGGAACTCCCTCACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTGGGGAACAAGCTTGAGATTTCTGTTACTAGGAACTCCCTCACT  850

seq1  CATAGTTACTTATGAGATTTAACAAATCTCCAGCAAAATGGTTCTCCCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTACTTATGAGATTTAACAAATCTCCAGCAAAATGGTTCTCCCAT  900

seq1  ACTCTTTCCCTTTAAAGAATAAACAAACCAAAGAACACTAGAATGGGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTCCCTTTAAAGAATAAACAAACCAAAGAACACTAGAATGGGAAT  950

seq1  CAGAAGGAGCAGGCTTGCGCACTTTAGCATTTTTTCCTATCAATGTAGAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGAGCAGGCTTGCGCACTTTAGCATTTTTTCCTATCAATGTAGAC  1000

seq1  AAGAACCTCATAGCACAAGGAAAACTAAGAACATAAAATG-TGGGGACTT  1049
       ||||||||||||||||||| |||||| |||||||||||| |||||||||
seq2  -AGAACCTCATAGCACAAGG-AAACTAGGAACATAAAATGTTGGGGACTT  1048

seq1  TGTAGA-GTGTAAAGCAGAAACGAGCAAATAAAGTTCGTCCAAGTAGACT  1098
      |||||| |||| |||||| ||||||| ||||||| |||| ||||||||||
seq2  TGTAGAGGTGT-AAGCAG-AACGAGC-AATAAAGGTCGTTCAAGTAGACT  1095

seq1  GTCTTCCCACTTTATTTCTGAACTTATTATATAATTATATAATCTGAGAC  1148
      |||||||||| |||||||||||| ||||| |||| ||  |||||||||||
seq2  GTCTTCCCAC-TTATTTCTGAAC-TATTA-ATAAATAATTAATCTGAGAC  1142

seq1  TTCATGCAATGGCTA  1163
       ||||||||||||||
seq2  -TCATGCAATGGCTA  1156

seq1: chr16_70394311_70395370
seq2: B6Ng01-028A18.g_66_1119 (reverse)

seq1  AAAAAATCACATGGTCTTGTGCAGCACTGCTTGTCCGGTATAGATTCATG  50
      ||||||||||||| ||||| ||||||| |||| ||||| |||||||||||
seq2  AAAAAATCACATGTTCTTG-GCAGCAC-GCTTTTCCGG-ATAGATTCATG  47

seq1  GTTGCCAACTGCACAGAAATCGATTGCACACTTCTGACTCCACTCTCTCC  100
      ||||||||||||| || ||||||||||||||| |||||||||||||||||
seq2  GTTGCCAACTGCA-AGGAATCGATTGCACACTCCTGACTCCACTCTCTCC  96

seq1  ACTCTCTACCTATCTATTTATTTTCCTCACACTGTCTGGGATCCTGCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTACCTATCTATTTATTTTCCTCACACTGTCTGGGATCCTGCTCT  146

seq1  TATTTTACCATGGCACTGTTCTCTTTTATCGTAGCACTTAGTCTGATTTC  200
      || |||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TA-TTTACCATGGCACTGTTCTC-TTTATCGTAGCACTTAGTCTGATTTC  194

seq1  TCTGAGAGAACAGAAGCCAGGTGAAAGGTAACATTTCAAAAGCCACCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAGAACAGAAGCCAGGTGAAAGGTAACATTTCAAAAGCCACCAAG  244

seq1  TGTCCCTCTTCAATGCTGTTTGTATTTATATGTGCTTATAAAAGTTAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTCTTCAATGCTGTTTGTATTTATATGTGCTTATAAAAGTTAATA  294

seq1  TAAAAAGTGATGTTACAGATCAATGCATTCACTCCTTTTTACCCTTGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTGATGTTACAGATCAATGCATTCACTCCTTTTTACCCTTGCCT  344

seq1  GTTTGACAGTGTAAATCTGTGCTCATTTCCTCTTTCTATGCTGCTTCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGACAGTGTAAATCTGTGCTCATTTCCTCTTTCTATGCTGCTTCCAC  394

seq1  TCTGTATATAGAATTGCCACATCTCTCCTTCCTGAAGTGCATTTATAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATATAGAATTGCCACATCTCTCCTTCCTGAAGTGCATTTATAAAG  444

seq1  AAAAGGCTGTCCTTCATTCACTTCTGTCCTAATACTTCTTCCCCCCAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCTGTCCTTCATTCACTTCTGTCCTAATACTTCTTCCCCCCAAAG  494

seq1  ACGTATTTAATTACTTATTCATGCGTATCTCTATGTGTCCGAGCACGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTATTTAATTACTTATTCATGCGTATCTCTATGTGTCCGAGCACGTGT  544

seq1  GTGGGAGTGTCTGCGAGACCTCTACCGGGTTTCTTCTGTTGATAGCTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAGTGTCTGCGAGACCTCTACCGGGTTTCTTCTGTTGATAGCTCTA  594

seq1  CTAACTAACACTCACTGCTTCTTATCTATATTAGCTGACCTAGCTTTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTAACACTCACTGCTTCTTATCTATATTAGCTGACCTAGCTTTCAA  644

seq1  ATATGCACACACTCTTATTCCTTGCACCACTGTGGTTTCAGAGCAGTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCACACACTCTTATTCCTTGCACCACTGTGGTTTCAGAGCAGTGAC  694

seq1  TGGAGTAGCTTACTGGAGCCTAAGGAGGCTTGGCCAAGTGTTCCACTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTAGCTTACTGGAGCCTAAGGAGGCTTGGCCAAGTGTTCCACTGAG  744

seq1  AATGTAAGTAAGTTGAAATCTGAGAGTAAGAATTGGGAATTGGAAATCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAGTAAGTTGAAATCTGAGAGTAAGAATTGGGAATTGGAAATCTG  794

seq1  GAAATCACCAGGAATTCAGCTTGGGCCATTTTAGGCACTGATCTGATCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCACCAGGAATTCAGCTTGGGCCATTTTAGGCACTGATCTGATCTG  844

seq1  AAGAAATGGAGGAAGAATTTGAGAACCTGGGCTGTCAGTGCCCAGGATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGGAGGAAGAATTTGAGAACCTGGGCTGTCAGTGCCCAGGATGT  894

seq1  GCACTTCATATCTTGGATGTGAAGAAAAATTTGCCTCACTGTACCAATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCATATCTTGGATGTGAAGAAAAATTTGCCTCACTGTACCAATTT  944

seq1  ATTGTGTTTGAATGTTGGAAACAAAAGGGCCGAGGTGGGATGTTCAGAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTTTGAATGTTGGAAACAAAAGGGCCGAGGTGGGATGTTCAGAAT  994

seq1  CCTCAGAGCATCAAAAAATCATTGAAATAACCTACTGAGAGAGCTATGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAGCATCAAAAAATCATTGAAATAACCTACTGAGAGAGCTATGAA  1044

seq1  GAATGAATTC  1060
      ||||||||||
seq2  GAATGAATTC  1054