BAC Information

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BAC

Clone NameB6Ng01-028P16
Chromosome16 (Build37)
Map Location 71,082,498 - 71,083,606
singlet/doubletsinglet
Overlap genenone
Upstream geneEG664930, Gbe1, D16Ertd519e, LOC100039231
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028P16.bB6Ng01-028P16.g
ACCDH859309DH859310
length1,1061,159
definitionDH859309|Mus musculus domesticus DNA, BAC clone: B6Ng01-028P16, 5' end.DH859310|Mus musculus domesticus DNA, BAC clone: B6Ng01-028P16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattgttgcataaaaacattcttaacgaaacccaaaaagtcaaa
gatggcctagctcactgcccctgtcacagtgctccagtaccctggtagtt
ctgggcagctgttaaatagcccagttgtgaggcctttactgagcctgggg
ccttcattagctgaatcttcttgcacaacagtgtgttactcagttagaaa
ctccatctaattataatgaggttccggtggccaagtcatgctgagaaaaa
cagttttccctcactctatctcctcataagtcaacaaaataatcaaagcc
tcaactggtctaaccttatatttttcctgactaaaccctctatcactgaa
cctgagctgatactcggatgcagactgatatccagtgttacctggtgttg
ggaatttcttcattactgaatatgggccatttagtgcatatatatatata
tataatatatatgtataaataaataaaataaatatatacaataaaagcca
aacaccaaattatgtgagtctctctctctctctttctctctctctctctc
aattttagaaagttaccctgctttgatgtttttctccaaagtttgtacaa
tgttgtgaattatcttaagacatataaatatttattttaagtttgaaaag
tccatcaccatcattatcttccccattaagtacaccaaacctaataaaaa
caatctccatgtaaattcaatacaactcatcataaactgtcaacatgaga
ctatatggcactgtatttcttccgacctggacaaaatttaactaaactct
gattatataaaaagaaacaaacggtaactaaaactacctggtccaaagat
taatataccactgcatgtctactttaaattctagagatctgtgacctaga
actggaaaggaaagtataaggtcatacagtaatggtggacgttatcccac
atactaccatagcaaaaccagggcttttattttaaatgcatttgctattt
gcactaatccctaccatttgtcttttgttcagtcttataaagaatataag
ggtttggtatttctgggttacatttgttaataaaaaaacatgcattttac
ccattt
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcacaacaactctgagat
tccacctcacacccgtcagaatggctaagatcaaaaattcaagtgacagc
agatgctggcaaggatgtagagaaagaggaacactccttcattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactacccgaggatcctgcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactgctcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgacaagtggatattagcccagaaac
ttagaatacccaagatataagatacaatttgcgaaacacatgaaactcaa
gaagaacgatgaccaaagtgtggacactttgccccttcttagaattggga
acaaaacacccatggaaagagttacagagacaaagtatggagctgagacg
aaaggattaaccatctagagatttccatatctggggatccatcccataat
ctgcttccaaaggctgacagcttgtatacactagcaagattttgctgaaa
ggacccagatatagctgtctcttgtgggaatatgccggggcctagcaaac
acagaagtggatgctcacagtcacctctttgatggatctcaggccccaat
gaggggctagagaaagtaccaagagctaaagggatctgcatcctatatgt
gaacacattatgaactaaccagtacccagagctcttgactctagctgcat
atgaatcagaagatggtagtagcatcaggaaagaaagcccatggattgca
cttaattgctctagttaggaatgctctgggtcaagaacatgaaatgttgt
gagatggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_71082498_71083606
seq2: B6Ng01-028P16.b_48_1153 (reverse)

seq1  AAATGGGTAAAATGCATGTTTGTATTAATAAACAAAATGGTGACCCAGAA  50
      ||||||||||||||||||||  | || || ||||||   || ||||||||
seq2  AAATGGGTAAAATGCATGTT--TTTTTATTAACAAA--TGTAACCCAGAA  46

seq1  ATACACAACCCATATATTCTTTATAAGACTGAACAAAAGACAAATGGTAG  100
      ||||  ||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAACCCTTATATTCTTTATAAGACTGAACAAAAGACAAATGGTAG  96

seq1  GGA-TAGTGCAAATAGCAAATGCATTTAAAATAAAAGCCCTGGTTTTGCT  149
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAGTGCAAATAGCAAATGCATTTAAAATAAAAGCCCTGGTTTTGCT  146

seq1  ATGGTAGTATGTGGGATAACGTCCACCATTACTGTATGACCTTATACTTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGTATGTGGGATAACGTCCACCATTACTGTATGACCTTATACTTT  196

seq1  CCTTTCCAGTTCTAGGTCACAGATCTCTAGAATTTAAAGTAGACATGCAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCAGTTCTAGGTCACAGATCTCTAGAATTTAAAGTAGACATGCAG  246

seq1  TGGTATATTAATCTTTGGACCAGGTAGTTTTAGTTACCGTTTGTTTCTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATATTAATCTTTGGACCAGGTAGTTTTAGTTACCGTTTGTTTCTTT  296

seq1  TTATATAATCAGAGTTTAGTTAAATTTTGTCCAGGTCGGAAGAAATACAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAATCAGAGTTTAGTTAAATTTTGTCCAGGTCGGAAGAAATACAG  346

seq1  TGCCATATAGTCTCATGTTGACAGTTTATGATGAGTTGTATTGAATTTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATATAGTCTCATGTTGACAGTTTATGATGAGTTGTATTGAATTTAC  396

seq1  ATGGAGATTGTTTTTATTAGGTTTGGTGTACTTAATGGGGAAGATAATGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGATTGTTTTTATTAGGTTTGGTGTACTTAATGGGGAAGATAATGA  446

seq1  TGGTGATGGACTTTTCAAACTTAAAATAAATATTTATATGTCTTAAGATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATGGACTTTTCAAACTTAAAATAAATATTTATATGTCTTAAGATA  496

seq1  ATTCACAACATTGTACAAACTTTGGAGAAAAACATCAAAGCAGGGTAACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAACATTGTACAAACTTTGGAGAAAAACATCAAAGCAGGGTAACT  546

seq1  TTCTAAAATTGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGACTCACATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAATTGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGACTCACATA  596

seq1  ATTTGGTGTTTGGCTTTTATTGTATATATTTATTTTATTTATTTATACAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTGTTTGGCTTTTATTGTATATATTTATTTTATTTATTTATACAT  646

seq1  ATATATTATATATATATATATATGCACTAAATGGCCCATATTCAGTAATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTATATATATATATATATGCACTAAATGGCCCATATTCAGTAATG  696

seq1  AAGAAATTCCCAACACCAGGTAACACTGGATATCAGTCTGCATCCGAGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATTCCCAACACCAGGTAACACTGGATATCAGTCTGCATCCGAGTA  746

seq1  TCAGCTCAGGTTCAGTGATAGAGGGTTTAGTCAGGAAAAATATAAGGTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCAGGTTCAGTGATAGAGGGTTTAGTCAGGAAAAATATAAGGTTA  796

seq1  GACCAGTTGAGGCTTTGATTATTTTGTTGACTTATGAGGAGATAGAGTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGTTGAGGCTTTGATTATTTTGTTGACTTATGAGGAGATAGAGTGA  846

seq1  GGGAAAACTGTTTTTCTCAGCATGACTTGGCCACCGGAACCTCATTATAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAACTGTTTTTCTCAGCATGACTTGGCCACCGGAACCTCATTATAA  896

seq1  TTAGATGGAGTTTCTAACTGAGTAACACACTGTTGTGCAAGAAGATTCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGGAGTTTCTAACTGAGTAACACACTGTTGTGCAAGAAGATTCAG  946

seq1  CTAATGAAGGCCCCAGGCTCAGTAAAGGCCTCACAACTGGGCTATTTAAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAAGGCCCCAGGCTCAGTAAAGGCCTCACAACTGGGCTATTTAAC  996

seq1  AGCTGCCCAGAACTACCAGGGTACTGGAGCACTGTGACAGGGGCAGTGAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCCAGAACTACCAGGGTACTGGAGCACTGTGACAGGGGCAGTGAG  1046

seq1  CTAGGCCATCTTTGACTTTTTGGGTTTCGTTAAGAATGTTTTTATGCAAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCCATCTTTGACTTTTTGGGTTTCGTTAAGAATGTTTTTATGCAAC  1096

seq1  AATTGAATTC  1109
      ||||||||||
seq2  AATTGAATTC  1106