BAC Information

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BAC

Clone NameB6Ng01-032D06
Chromosome16 (Build37)
Map Location 67,238,058 - 67,239,161
singlet/doubletsinglet
Overlap geneCadm2
Upstream genenone
Downstream gene9330155M09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032D06.bB6Ng01-032D06.g
ACCDH861609DH861610
length1,0961,072
definitionDH861609|Mus musculus domesticus DNA, BAC clone: B6Ng01-032D06, 5' end.DH861610|Mus musculus domesticus DNA, BAC clone: B6Ng01-032D06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtatgctttttaaaatgtatttaaatatgtattaaaatcaat
ctatttaaactagttttttatatttgagttgattttttttcaatgcaaaa
tgtgaacttttcatgactttcaaaatctacacatgtacctctgtttacac
attcatcttattttggtaatatcagtttcagtaataataaaatgacattg
aaaacactcatacacaattgtcttttctctgaattgtcaaagaagtgtgt
catacactgagtgttagagtctctttggagacagcgtcaggaaagaaatg
gagtgacaattgggacaggaggatgtgttgcaacagttgtcatttcttgt
tcaaaatccagagcaatatagcatgatttctcttaatgtcataggatctc
aggctcagcagtggtaaggaaactgtagcctggctcaggcaggattttca
tgagacagagtctgacagacagacaggccatgtccagacataatatggcg
tgtagaagtgtgtgaagcttgtatgtaggcaatgtatattttgccctact
aacaatgtctctacaaatggagaagtatttagtaatgtaagctattcaga
tgtgtgatgtgaagtctcagcctgaagtcagatctgtgcagtcaatagtt
tccttaattcaactccatgaaggttcaatagttgaatttctcacaggcat
gtggtgagaagagggaaggggttgccgacttttcttgtttttttagagaa
aatagaataaaatataaatattagaaggaaattatcctgagtatgagttg
caaaagaaattgtatgtatattttgctgaaatctcaatttaaaagtcaca
ttttagataaatgaatacttttaagagaagacaaattcataaaatatttg
gccacagaattttcttcttgatacttttcttctctcatctcccgtcctgt
cgtgtcctgtcgtgtcctgtcgtgtcctgtcagtcctgtctgttcccccc
tctccactcttttcctctcctctcctccccccattttcaactttagcaca
gctcctgggactgtcctttacctagtcctttgatgtcaaaattttc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagaactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgagttaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttaccgagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccatacgctgacacctttgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acaaaagtggatgccacagtcagctaatggtggatcacaggctcccatgg
agagctagagaagtactcaggagctaagggatttgcaaccttaagtggat
cacattatgacaatcagtacccggagtcttgatctagtttcttttgtatc
aaaatgatggcctatgcggctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_67238058_67239161
seq2: B6Ng01-032D06.b_48_1143

seq1  GAATTCCTGTATGCTTTTTAAAATGTATTTAAATATGTATTAAAATCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTATGCTTTTTAAAATGTATTTAAATATGTATTAAAATCAAT  50

seq1  CTATTTAAACTAGTTTTTTATATTTGAGTTGATTTTTTTTCAATGCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTAAACTAGTTTTTTATATTTGAGTTGATTTTTTTTCAATGCAAAA  100

seq1  TGTGAACTTTTCATGACTTTCAAAATCTACACATGTACCTCTGTTTACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACTTTTCATGACTTTCAAAATCTACACATGTACCTCTGTTTACAC  150

seq1  ATTCATCTTATTTTGGTAATATCAGTTTCAGTAATAATAAAATGACATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCTTATTTTGGTAATATCAGTTTCAGTAATAATAAAATGACATTG  200

seq1  AAAACACTCATACACAATTGTCTTTTCTCTGAATTGTCAAAGAAGTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACTCATACACAATTGTCTTTTCTCTGAATTGTCAAAGAAGTGTGT  250

seq1  CATACACTGAGTGTTAGAGTCTCTTTGGAGACAGCGTCAGGAAAGAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACTGAGTGTTAGAGTCTCTTTGGAGACAGCGTCAGGAAAGAAATG  300

seq1  GAGTGACAATTGGGACAGGAGGATGTGTTGCAACAGTTGTCATTTCTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGACAATTGGGACAGGAGGATGTGTTGCAACAGTTGTCATTTCTTGT  350

seq1  TCAAAATCCAGAGCAATATAGCATGATTTCTCTTAATGTCATAGGATCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATCCAGAGCAATATAGCATGATTTCTCTTAATGTCATAGGATCTC  400

seq1  AGGCTCAGCAGTGGTAAGGAAACTGTAGCCTGGCTCAGGCAGGATTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCAGCAGTGGTAAGGAAACTGTAGCCTGGCTCAGGCAGGATTTTCA  450

seq1  TGAGACAGAGTCTGACAGACAGACAGGCCATGTCCAGACATAATATGGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGAGTCTGACAGACAGACAGGCCATGTCCAGACATAATATGGCG  500

seq1  TGTAGAAGTGTGTGAAGCTTGTATGTAGGCAATGTATATTTTGCCCTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAAGTGTGTGAAGCTTGTATGTAGGCAATGTATATTTTGCCCTACT  550

seq1  AACAATGTCTCTACAAATGGAGAAGTATTTAGTAATGTAAGCTATTCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGTCTCTACAAATGGAGAAGTATTTAGTAATGTAAGCTATTCAGA  600

seq1  TGTGTGATGTGAAGTCTCAGCCTGAAGTCAGATCTGTGCAGTCAATAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGATGTGAAGTCTCAGCCTGAAGTCAGATCTGTGCAGTCAATAGTT  650

seq1  TCCTTAATTCAACTCCATGAAGGTTCAATAGTTGAATTTCTCACAGGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAATTCAACTCCATGAAGGTTCAATAGTTGAATTTCTCACAGGCAT  700

seq1  GTGGTGAGAAGAGGGAAGGGGTTGCCGACTTTTCTTGTTTTTTTAGAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGAGAAGAGGGAAGGGGTTGCCGACTTTTCTTGTTTTTTTAGAGAA  750

seq1  AATAGAATAAAATATAAATATTAGAAGGAAATTATCCTGAGTATGAGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAATAAAATATAAATATTAGAAGGAAATTATCCTGAGTATGAGTTG  800

seq1  CAAAAGAAATTGTATGTATATTTTGCTGAAATCTCAATTAAAAAGTCACA  850
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAAAAGAAATTGTATGTATATTTTGCTGAAATCTCAATTTAAAAGTCACA  850

seq1  TTTTAGATAAATGAATACTTTTAAGAGAAGACAAAATTCATAAAATATTT  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTTAGATAAATGAATACTTTTAAGAGAAGAC-AAATTCATAAAATATTT  899

seq1  GGCCACAGAATTTTCTTCTTGATACTTTTCTTCTCTCATCTCCCGTCCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACAGAATTTTCTTCTTGATACTTTTCTTCTCTCATCTCCCGTCCTG  949

seq1  TCGTGTCCTGTCGTGTCCTGTCGTGTCCTGTCGTGTCCTGTCCTGTTCTC  1000
      ||||||||||||||||||||||||||||||||  ||||||| |||||| |
seq2  TCGTGTCCTGTCGTGTCCTGTCGTGTCCTGTC-AGTCCTGT-CTGTTCCC  997

seq1  TCCTCTCCTCTCTTTTCCTCTCCTCTCCTCCCCCACATTTTCAGACTTTA  1050
       ||||||| ||||||||||||||||||||||||| |||||||| ||||||
seq2  CCCTCTCCACTCTTTTCCTCTCCTCTCCTCCCCC-CATTTTCA-ACTTTA  1045

seq1  GCACAGGCTCCT-GGACTGTCCTTTCACTAGTCCTTTTGCATGTCAAATA  1099
      ||||| |||||| ||||||||||||  ||||||||||   |||||||| |
seq2  GCACA-GCTCCTGGGACTGTCCTTTACCTAGTCCTTT--GATGTCAAA-A  1091

seq1  TTTTC  1104
      |||||
seq2  TTTTC  1096