BAC Information

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BAC

Clone NameB6Ng01-032G07
Chromosome16 (Build37)12 (Build37)
Map Location 55,384,970 - 55,385,46437,292,746 - 37,293,695
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100043449, LOC667927, LOC436421, Zpld1
Downstream geneNfkbiz, Gm1752, Lrriq2, EG667966, LOC629242, Rpl24, Zbtb11, Pcnp, Rg9mtd1, Senp7, Impg2, LOC672835
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032G07.bB6Ng01-032G07.g
ACCDH861745DH861746
length845944
definitionDH861745|Mus musculus domesticus DNA, BAC clone: B6Ng01-032G07, 5' end.DH861746|Mus musculus domesticus DNA, BAC clone: B6Ng01-032G07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(55,384,970 - 55,385,464)(37,292,746 - 37,293,695)
sequence
gaattcaattttattagatattagaatggctactccagcttgtttcttca
gaccatttgcttggaaatttgttttccagcctttcattctgaggtagtgt
ctgtctttttctctgagatgggtttcctgtaagcagcagaatgttgggtc
ctgtttgtgtagccagtctgttagtctatgtctttttattggggaattga
gtccattgatactaagagatattaaggaaaagtaattgttgcttcctttt
atttttgttgttagagttggcattctgttcttgtggctgtcttcttttag
ttttgttgagggattactttcttgctttttctagggcgtgatttccgtct
ttgtatttgtttttttctgttattacactttgacgggctggattcgagga
aagattatgtgtgaatttggttttgtcgtggaatactttgatttctccat
ctatggtaattgagagtttggccgggtatagtagcctgggatggcatttg
tgttctcttagtgtctgtataacatctgtccaggctcttctggttttcat
actctctggtgaaaaatctggtgtaattctgataggccttcctttatatg
ttacttgacctttctcccttactgcttttaatattctatctttatttagt
gcatttgttgttctgattattatgtgttgggaggaatttcttttctggtt
cagtctatttggagttctgtaggcttcttgtatgttcatgggcatctcct
tcttttaggttgggcagtttttcctctataattttgttgaagatatttgc
tggccctttaagttgaaaagcttcatttcatctattcctattatc
gaattctcagcttttagctgtgcccacagaactgataaaatgactggata
agaccatcaatagtccatgaaacttttctgaagtttcaatgagtctgaaa
gttataacacatctgaaagtacccagcacacggtagtcaataaacattaa
tcttctcatacacacacaagtaccgttaactaggctgagcatgtacagga
aaaaaaaaaaaggatagatacatgacttgagtgagcatggaaccttaagc
taaaattagaaaggaatactgtcgatggtaatatatgcatccaagataaa
cccaacagtgcttgcaataatgcacctgaataaattggaagccataggca
tatccatagagacctcagatttaaactctaaaatcagataattaagtcac
agtccaatacaaacaaacaaacaaaaagctatcttcacaggtcaaataag
gactgttcctagcacttgacactttctgattacagaaatttacacaactg
cggtgatatgtcctgctttccattctccttgagtggtcagctagatcact
ctgcataaagctactgctattccagatactgctatctcatggctgaatga
tgcactgctatcatatacaaaacaagcaaacctcatggggtggttactca
aattactgaaatgctacctatcttgtttgggtgacacacagcagggactg
tgcttacttgacaatatttttgagaataaaagttaaaaatctttatcccg
agcagtagtagcacacgcctttattcccagcactcaggaggcagaagcag
gcggatttctgagttcgaggccagcctggtcttcaaagtgagttctagga
cagtcagggctatacagagaaccctgtttcaaaaacaacccaaatcaaaa
acaacccaaaaaaagttaaatcttaaaaacaaaaaacaacaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_55384970_55385464
seq2: B6Ng01-032G07.b_395_889 (reverse)

seq1  GATAATAGGAATAGATGAGAATGAAGATTGTAAACTCAAAGGGCCAGCAA  50
      |||||||||||||||||| ||||||| || | |||| |||||||||||||
seq2  GATAATAGGAATAGATGA-AATGAAGCTTTTCAACTTAAAGGGCCAGCAA  49

seq1  ATATCTTCAACAGAATTATAGAAG-AAAACTTCCCAAACCTAGAGAAAGA  99
      |||||||||||| ||||||||| | |||||| ||||| |  | |||| ||
seq2  ATATCTTCAACAAAATTATAGAGGAAAAACTGCCCAACCTAAAAGAAGGA  99

seq1  AATGCCAATGAACATACAAGAAGCCTACAGAACTCCAAACACACTAGACC  149
       ||||| |||||||||||||||||||||||||||||||| | |||  |||
seq2  GATGCCCATGAACATACAAGAAGCCTACAGAACTCCAAATAGACTGAACC  149

seq1  AGAAAAGAAATTCCTCCCAACAAATAATAATCAGAACAACAAATGCACTA  199
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGAAAAGAAATTCCTCCCAACACATAATAATCAGAACAACAAATGCACTA  199

seq1  AATAAAGATAGAATATTAAAAGCAGTAAGGGGAAAAGGTCAAGTGACATA  249
      |||||||||||||||||||||||||||||||  ||||||||||| |||||
seq2  AATAAAGATAGAATATTAAAAGCAGTAAGGGAGAAAGGTCAAGTAACATA  249

seq1  TAAAGGCAGGCCTATCAGAAATACACCAGATTTTTCACCAGAGAATATAA  299
      |||||| ||||||||||||| ||||||||||||||||||||||| ||| |
seq2  TAAAGGAAGGCCTATCAGAATTACACCAGATTTTTCACCAGAGAGTATGA  299

seq1  AAGCCAGAAGATCCTGGACAGATGTTATACAGACACTAAGAGAACACAAA  349
      || |||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGAAGAGCCTGGACAGATGTTATACAGACACTAAGAGAACACAAA  349

seq1  TGCCAGCCCAGGCTACAATACCCAGCCAAACTTTCAATTACCTTAGATGG  399
      ||||| |||||||||| |||||| |||||||| ||||||||| |||||||
seq2  TGCCATCCCAGGCTACTATACCCGGCCAAACTCTCAATTACCATAGATGG  399

seq1  AGAAACCAAAGTATTCCATGACAAAACCAAATTCACACATTATCTTTCAA  449
      ||||| |||||||||||| ||||||||||||||||||||| |||||||  
seq2  AGAAATCAAAGTATTCCACGACAAAACCAAATTCACACATAATCTTTCCT  449

seq1  CGAATCCAGCCCTTCAAAGGATAATGACAGAAAAAAACCAATACAA  495
      |||||||||||| ||||||  |||| |||||||||||| |||||||
seq2  CGAATCCAGCCCGTCAAAGTGTAATAACAGAAAAAAACAAATACAA  495

seq1: chr12_37292746_37293695
seq2: B6Ng01-032G07.g_68_1011 (reverse)

seq1  TGTTGTTGTTGCTTCTTTTGTTTTTAAGATTTTAACTTTTTTTTGGTTTG  50
      ||||||||||     |||||||||||||| ||||||||||||| ||||  
seq2  TGTTGTTGTT-----TTTTGTTTTTAAGA-TTTAACTTTTTTTGGGTT--  42

seq1  TTTTTTGTTTTGGGTTGTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTG  100
       |||||| ||||||||| ||||||| |||||| |||||||| ||||||||
seq2  GTTTTTGATTTGGGTTG-TTTTTGAAACAGGG-TTCTCTGTATAGCCCTG  90

seq1  GCTGTCCTGGAACTCACTTTGAAGACCAGGCTGGCCTCGAACTCAGAAAT  150
       ||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCTAGAACTCACTTTGAAGACCAGGCTGGCCTCGAACTCAGAAAT  140

seq1  CCGCCTGCTTCTGCCTCCTGAGTGCTGGGAATAAAGGCGTGTGCTACTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCTGCTTCTGCCTCCTGAGTGCTGGGAATAAAGGCGTGTGCTACTAC  190

seq1  TGCTC-GGAT-AAGA-TTTTAACTTTTATTCTCAAAAATATTGTCAAGTA  247
      ||||| |||| |||| ||||||||||||||||||||||||||||||||||
seq2  TGCTCGGGATAAAGATTTTTAACTTTTATTCTCAAAAATATTGTCAAGTA  240

seq1  AGCACAGTCCCTGCTGTGTGTCA-CCAAACAAGATAGGTAGCATTTCAGT  296
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGCACAGTCCCTGCTGTGTGTCACCCAAACAAGATAGGTAGCATTTCAGT  290

seq1  AATTTGAGTAACCACCCCATGAGGTTTGCTTGTTTTGTATATGATAGCAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAGTAACCACCCCATGAGGTTTGCTTGTTTTGTATATGATAGCAG  340

seq1  TGCATCATTCAGCCATGAGATAGCAGTATCTGGAATAGCAGTAGCTTTAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCATTCAGCCATGAGATAGCAGTATCTGGAATAGCAGTAGCTTTAT  390

seq1  GCAGAGTGATCTAGCTGACCACTCAAGGAGAATGGAAAGCAGGACATATC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTGATCTAGCTGACCACTCAAGGAGAATGGAAAGCAGGACATATC  440

seq1  ACCGCAGTTGTGTAAATTTCTGTAATCAGAAAGTGTCAAGTGCTAGGAAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCAGTTGTGTAAATTTCTGTAATCAGAAAGTGTCAAGTGCTAGGAAC  490

seq1  AGTCCTTATTTGACCTGTGAAGATAGCTTTTTGTTTGTTTGTTTGTATTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTATTTGACCTGTGAAGATAGCTTTTTGTTTGTTTGTTTGTATTG  540

seq1  GACTGTGACTTAATTATCTGATTTTAGAGTTTAAATCTGAGGTCTCTATG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGACTTAATTATCTGATTTTAGAGTTTAAATCTGAGGTCTCTATG  590

seq1  GATATGCCTATGGCTTCCAATTTATTCAGGTGCATTATTGCAAGCACTGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGCCTATGGCTTCCAATTTATTCAGGTGCATTATTGCAAGCACTGT  640

seq1  TGGGTTTATCTTGGATGCATATATTACCATCGACAGTATTCCTTTCTAAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTATCTTGGATGCATATATTACCATCGACAGTATTCCTTTCTAAT  690

seq1  TTTAGCTTAAGGTTCCATGCTCACTCAAGTCATGTATCTATCCTTTTTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTTAAGGTTCCATGCTCACTCAAGTCATGTATCTATCCTTTTTTT  740

seq1  TTTTTCCTGTACATGCTCAGCCTAGTTAACGGTACTTGTGTGTGTATGAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTGTACATGCTCAGCCTAGTTAACGGTACTTGTGTGTGTATGAG  790

seq1  AAGATTAATGTTTATTGACTACCGTGTGCTGGGTACTTTCAGATGTGTTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTAATGTTTATTGACTACCGTGTGCTGGGTACTTTCAGATGTGTTA  840

seq1  TAACTTTCAGACTCATTGAAACTTCAGAAAAGTTTCATGGACTATTGATG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTCAGACTCATTGAAACTTCAGAAAAGTTTCATGGACTATTGATG  890

seq1  GTCTTATCCAGTCATTTTATCAGTTCTGTGGGCACAGCTAAGAGCTGAGA  946
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTCTTATCCAGTCATTTTATCAGTTCTGTGGGCACAGCTAAAAGCTGAGA  940

seq1  ATTC  950
      ||||
seq2  ATTC  944