BAC Information

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BAC

Clone NameB6Ng01-033A09
Chromosome16 (Build37)
Map Location 75,778,067 - 75,779,103
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665042, D930038D03Rik, Rbm11, Stch, LOC546667
Downstream geneSamsn1, 4930578N18Rik, LOC100039457, Nrip1, LOC100039316
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033A09.bB6Ng01-033A09.g
ACCDH862191DH862192
length9771,033
definitionDH862191|Mus musculus domesticus DNA, BAC clone: B6Ng01-033A09, 5' end.DH862192|Mus musculus domesticus DNA, BAC clone: B6Ng01-033A09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgcagttgaatccttctcaacacctctgttttacgggaacctt
tattaccgtgacccgcagttctggttccggaatgagggatcttccttgcg
ccggtgatggttaactcccgtcccgagttttcttgtattttctcgttccc
ggtttcagcaccaactcttaaacgcgttctcacgaccggccaggaagaac
acaacaaaccagaatcttctgcggcaaaactttattgcttacatcttcag
gagcaggagcgcaagcccccagccccaaaaacgaaagcccccaaaaaacg
aaagcgaaaccccgtccctatttaggagagttatccttcgcctaggacga
atcactccctgattggctgcagcccatggccgagttgacgtcacgggaaa
ggcagagtacatgtagtggtaaaatacccttggcacatgcgcagattatt
tgtttaccacttagaacacaggatgtcagcgccatcttgtgacggcgaat
gtgggggcggctcccaacaggaaatggaatgagagatcaggtctgctttc
ccttgtcagttctgggaccccatgtggtttgagcctgtcaaagtcttatg
aatgctgctacagtctctgtgagtttttatgtgtacctgtcctgttgtgt
ctggaacacaatgcttccctttgtgtcctccatcccctctggctcttata
gcctcaatctcttcttcctcatagtcctctgagaccagaatgggaaagct
tgaaggggacatcccatttaggactaattatttttaaattgtcccattct
ctgtatgtagcccaaccatgggtttctgtgttaacgcagttcttggccat
caaagtagaatccaacatagcttttcatctcctggagagatctgaattca
attagaagaggtttgcttgctcccattacttttgtaccacaatctcaaag
gtatgagcataccttgctgcaggtcac
gaattctcccctaccagaatgtttactcattggtgatgcatccctgttcc
ttaaataatgcaaactgaaagaaacaccatggttaaacacagttttggat
aatgaaatattctttatactttagaacatgaacggatatttcatgttttg
taacaaaaatctgattagactttagaagccaaaattataattacaatcta
agacaacacatagcacataagttagataatatgcatactagattcataat
gtaggcatgtgaagttgcttattttaatcaactaactcatcaattaaaaa
gaagttattcacactgtgtgcaatactgcacttagcagcattcagacaca
gaactataagaaagtctctttccactgagcccagattttaattggatata
tcacttatttcacataaataataatgtgcaataaaagtcagaatttaatt
atcagctaaattaagtgatgattaaccaaagccgtgaagaagttcaaaca
tgggagctgtgttacccagagcaatggcccaatggaaacgagcactgagg
ggctggcgacagtgagctagatttgtggaggagaagatctagagaactgt
atttcatgtgattcccagaaccttaacttcactgcgcaaccaaagagaag
gtacagaaaaggggccttcgttggacaaaaaaatgtagacaaggagctcc
tatcctttaagcagagggtgaattgagggttctagcaagaaatgtttggc
tggaaaagaatgggccaattggacgaatttttgaaagcctggcaataaag
tttagatttgatgcattaaagtataaaatgggttttgataaattcaaaga
gagtggcttaataaattccgtctttaagagagattagtctggcagccaca
ttcgccataagtggtctaatatggattggttcacttgagttacttggcta
catatttggactcaaattcatctacaaagaagcatttcatatatctttat
atatttattttacaggatggttaaatattattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_75778067_75779103
seq2: B6Ng01-033A09.g_68_1100 (reverse)

seq1  AAATA--ATTTAACCATCCTGTAAAATAAAATATATAAAGATATATGAAA  48
      |||||  |||||||||||||||||||| ||||||||||||||||||||||
seq2  AAATAATATTTAACCATCCTGTAAAAT-AAATATATAAAGATATATGAAA  49

seq1  TGCTTTCTTTGTAGATGAATTTTGAGTCCAAATATTGTTAGCCAAGTAAC  98
      ||| ||||||||||||||| |||||||||||||||   ||||||||||||
seq2  TGC-TTCTTTGTAGATGAA-TTTGAGTCCAAATAT--GTAGCCAAGTAAC  95

seq1  TCAAGTGGAACCAATCCATATTAGACCACTTATGGCGAATGTGGCTGCCA  148
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGT-GAACCAATCCATATTAGACCACTTATGGCGAATGTGGCTGCCA  144

seq1  GACTAATCTCTCTTAAAGACGGAATTTATTAAGCCACTCTCTTTGAATTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATCTCTCTTAAAGACGGAATTTATTAAGCCACTCTCTTTGAATTT  194

seq1  ATCAAAACCCATTTTATACTTTAATGCATCAAATCTAAACTTTATTGCCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAACCCATTTTATACTTTAATGCATCAAATCTAAACTTTATTGCCA  244

seq1  GGCTTTCAAAAATTCGTCCAATTGGCCCATTCTTTTCCAGCCAAACATTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTCAAAAATTCGTCCAATTGGCCCATTCTTTTCCAGCCAAACATTT  294

seq1  CTTGCTAGAACCCTCAATTCACCCTCTGCTTAAAGGATAGGAGCTCCTTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTAGAACCCTCAATTCACCCTCTGCTTAAAGGATAGGAGCTCCTTG  344

seq1  TCTACATTTTTTTGTCCAACGAAGGCCCCTTTTCTGTACCTTCTCTTTGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATTTTTTTGTCCAACGAAGGCCCCTTTTCTGTACCTTCTCTTTGG  394

seq1  TTGCGCAGTGAAGTTAAGGTTCTGGGAATCACATGAAATACAGTTCTCTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGCAGTGAAGTTAAGGTTCTGGGAATCACATGAAATACAGTTCTCTA  444

seq1  GATCTTCTCCTCCACAAATCTAGCTCACTGTCGCCAGCCCCTCAGTGCTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCTCCTCCACAAATCTAGCTCACTGTCGCCAGCCCCTCAGTGCTC  494

seq1  GTTTCCATTGGGCCATTGCTCTGGGTAACACAGCTCCCATGTTTGAACTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCATTGGGCCATTGCTCTGGGTAACACAGCTCCCATGTTTGAACTT  544

seq1  CTTCACGGCTTTGGTTAATCATCACTTAATTTAGCTGATAATTAAATTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACGGCTTTGGTTAATCATCACTTAATTTAGCTGATAATTAAATTCT  594

seq1  GACTTTTATTGCACATTATTATTTATGTGAAATAAGTGATATATCCAATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTATTGCACATTATTATTTATGTGAAATAAGTGATATATCCAATT  644

seq1  AAAATCTGGGCTCAGTGGAAAGAGACTTTCTTATAGTTCTGTGTCTGAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTGGGCTCAGTGGAAAGAGACTTTCTTATAGTTCTGTGTCTGAAT  694

seq1  GCTGCTAAGTGCAGTATTGCACACAGTGTGAATAACTTCTTTTTAATTGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTAAGTGCAGTATTGCACACAGTGTGAATAACTTCTTTTTAATTGA  744

seq1  TGAGTTAGTTGATTAAAATAAGCAACTTCACATGCCTACATTATGAATCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTAGTTGATTAAAATAAGCAACTTCACATGCCTACATTATGAATCT  794

seq1  AGTATGCATATTATCTAACTTATGTGCTATGTGTTGTCTTAGATTGTAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCATATTATCTAACTTATGTGCTATGTGTTGTCTTAGATTGTAAT  844

seq1  TATAATTTTGGCTTCTAAAGTCTAATCAGATTTTTGTTACAAAACATGAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTTTGGCTTCTAAAGTCTAATCAGATTTTTGTTACAAAACATGAA  894

seq1  ATATCCGTTCATGTTCTAAAGTATAAAGAATATTTCATTATCCAAAACTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCGTTCATGTTCTAAAGTATAAAGAATATTTCATTATCCAAAACTG  944

seq1  TGTTTAACCATGGTGTTTCTTTCAGTTTGCATTATTTAAGGAACAGGGAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAACCATGGTGTTTCTTTCAGTTTGCATTATTTAAGGAACAGGGAT  994

seq1  GCATCACCAATGAGTAAACATTCTGGTAGGGGAGAATTC  1037
      |||||||||||||||||||||||||||||||||||||||
seq2  GCATCACCAATGAGTAAACATTCTGGTAGGGGAGAATTC  1033