BAC Information

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BAC

Clone NameB6Ng01-033F21
Chromosome16 (Build37)
Map Location 34,917,918 - 35,050,649
singlet/doubletdoublet
Overlap geneMylk, Ptplb
Upstream geneItgb5, Umps, Kalrn, LOC100043670, Ropn1, Ccdc14
Downstream geneAdcy5, Sec22a, Pdia5, Sema5b, EG546663, Dirc2, Hspbap1, Parp14, LOC667133, LOC100043217, Dtx3l, Parp9, Kpna1, Wdr5b, 2310056P07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033F21.bB6Ng01-033F21.g
ACCDH862434DH862435
length1,198532
definitionDH862434|Mus musculus domesticus DNA, BAC clone: B6Ng01-033F21, 5' end.DH862435|Mus musculus domesticus DNA, BAC clone: B6Ng01-033F21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,049,450 - 35,050,649)(34,917,918 - 34,918,454)
sequence
gaattccaaacctccaaaattagaaggaacagatattcataagtcactca
gtgtacagggagatgtgctttgactggtgatggggaatacaccactaatt
ctgtcataattgaaaatgtcaccagtagaaaatgaatttctgccatctac
tactttgcatcttaatagtgtgcactggacagtactggctgccccgtgag
gtcacgtggctgactgagctgcatttccaaccactgcttggcactgagag
agaatatcataatagctcaaaaaagatgagggacagtcttcagccaggtg
cacacacacttcttccatattatctcacagattcaaagttaagtcatcaa
agatagaggaagctctagagagacagacaactgagggttaagaggatagc
acacacagcctgactatgtggggtaggcctgcagtggtccagagctcttt
ggccaaatgtatttcccatctgctagtttatacttagaatcaattaaatt
tttattgttaatttgtgagatgctaaaaattaaacgccaggtcttctgcg
tgtgtatgtgctctcccactgagcactctcccactgagcaaagcttgcat
gcttaaaacgcatcacatttaagaagggctacaatgtagtgccttaaaac
tgtaggtaaaagactaaaaggatagatgtaagatcacataagataaaata
agttaggcagactcagaagccagatttgggtataaatgaggtacattatt
ttcatttaataagtaatatttattaacaataatagtaataattatcaata
cctttgtaaactggggaaggagattgtgtaacagccccaggagctctcaa
atttatctttcaaagtttctaaggcagtgctctaaagctttcaggggacc
aaaagtcttaccaatctaacgaatgcaatgagcccctcaaataaacagtg
ctcagcccaacaggtcttgcagcagcagaggtacagccctggagcaaaga
caccttgccttccttaacggtagttagtctggggatcaagagacctctgc
agaccacttggcagcgtcagctgtgtcttcactttaacttggtcttatca
actccagactgctccttcctggatcgacaagaccagtcaggcaccctgaa
atatgagtggctacttacaagttaactggaggggtgacactggtttag
atcgttggtcccttcatgaatcccttgcccttttcctcccaaagtctaga
ttcctcattcctcccggaggccattgccttggccttggctctgtccccag
cagaaaatggagcaagtcagtggaaagttctcctgaggagtgcatgccag
gcctgccagggaccttgttccctctcactatttttgtcctgacagaagtc
agacctagcccatggaagagggtctttcaagaaggaaggctggtagccag
gcagtagggacgcacgcctttaatcccagcacttggaaggcagaggcagg
tggatttttgagatcaaggacagcctggtctacagagtgagttccaggac
agccaaggctacacagagaaaccctgtcaaaaaaaaaaaaaaaaaaagag
gggaaagaggaagaagaggaggaggaggaaggctgggaagtggggctgtg
agacaaccaagggggtgcagtctgttcctgtggagtagtggacatggatg
agttttgacctctccttccctttcgccagccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_35049450_35050649
seq2: B6Ng01-033F21.b_46_1243 (reverse)

seq1  CTAAACCAGTGTCACCCCTCAGTTTAACTCGTAGCTAG-CACTCTATA-T  48
      ||||||||||||||||||||   |||||| |||  ||| ||||| ||| |
seq2  CTAAACCAGTGTCACCCCTCCAGTTAACTTGTAAGTAGCCACTC-ATATT  49

seq1  TCAGGGTGCTGGGCTTGGTGCTGACAGTCAAGG-AGGAGCAGTCTTGGAG  97
      |||||||||  | | ||||  || |  || ||| |||||||||| |||||
seq2  TCAGGGTGCCTGAC-TGGTCTTGTCGATCCAGGAAGGAGCAGTC-TGGAG  97

seq1  TTGATAAGGCCATG-TAAAGTGGAGACACAGCTGACCGCTGCCACGTGGT  146
      |||||||| ||| | ||||||| |||||||||||| |||||||| |||||
seq2  TTGATAAGACCAAGTTAAAGTGAAGACACAGCTGA-CGCTGCCAAGTGGT  146

seq1  CTGCAGAGGTCTCTGTGATCCCCAGACTAACTAACGTTAAGGAAGGCAAG  196
      |||||||||||||| |||||||||||||||||| ||||||||||||||||
seq2  CTGCAGAGGTCTCT-TGATCCCCAGACTAACTACCGTTAAGGAAGGCAAG  195

seq1  GTGTCTTTGCTCCAGGGCTGTACCTCTGCTGCTGCAGAACCTGTTGGGCT  246
      ||||||||||||||||||||||||||||||||||||  ||||||||||||
seq2  GTGTCTTTGCTCCAGGGCTGTACCTCTGCTGCTGCAAGACCTGTTGGGCT  245

seq1  GAGCACCTGTTTATTTGAGGGGCTCATTGCATTCGTTAGATTGGTAAGAC  296
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCA-CTGTTTATTTGAGGGGCTCATTGCATTCGTTAGATTGGTAAGAC  294

seq1  TTTTGGTCCCCTGAAAGGCTTTAGAGCACTGCCTTAGAAACTTTGAAAGA  346
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTTGGTCCCCTGAAA-GCTTTAGAGCACTGCCTTAGAAACTTTGAAAGA  343

seq1  TAAATTTGAGAGCTCCTGGGGCTGTTACACAATCTCCTTCCCCAGTTTAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTGAGAGCTCCTGGGGCTGTTACACAATCTCCTTCCCCAGTTTAC  393

seq1  AAAGGTATTGATAATTATTACTATTATTGTTAATAAATATTACTTATTAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTATTGATAATTATTACTATTATTGTTAATAAATATTACTTATTAA  443

seq1  ATGAAAATAATGTACCTCATTTATACCCAAATCTGGCTTTAGAGTCTGCC  496
      |||||||||||||||||||||||||||||||||||||||  |||||||||
seq2  ATGAAAATAATGTACCTCATTTATACCCAAATCTGGCTTCTGAGTCTGCC  493

seq1  TAACTTATTTTATCTTATGTGATCTTACATCTATCCTTTTAGTCTTTTAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTATTTTATCTTATGTGATCTTACATCTATCCTTTTAGTCTTTTAC  543

seq1  CTACAGTTTTAAGGCACTACATTGTAGCCCTTCTTAAATG-ATTGCGTTT  595
      ||||||||||||||||||||||||||||||||||||||||   |||||||
seq2  CTACAGTTTTAAGGCACTACATTGTAGCCCTTCTTAAATGTGATGCGTTT  593

seq1  TAAGCATGCAAGCTTTGCTCAGTGGGAGAGTGCTCAGTGGGAGAGCACAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATGCAAGCTTTGCTCAGTGGGAGAGTGCTCAGTGGGAGAGCACAT  643

seq1  ACACACGCAGAAGACCTGGCGTTTAATTTTTAGCATCTCACAAATTAACA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACGCAGAAGACCTGGCGTTTAATTTTTAGCATCTCACAAATTAACA  693

seq1  ATAAAAATTTAATTGATTCTAAGTATAAACTAGCAGATGGGAAATACATT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATTTAATTGATTCTAAGTATAAACTAGCAGATGGGAAATACATT  743

seq1  TGGCCAAAGAGCTCTGGACCACTGCAGGCCTACCCCACATAGTCAGGCTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAAAGAGCTCTGGACCACTGCAGGCCTACCCCACATAGTCAGGCTG  793

seq1  TGTGTGCTATCCTCTTAACCCTCAGTTGTCTGTCTCTCTAGAGCTTCCTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCTATCCTCTTAACCCTCAGTTGTCTGTCTCTCTAGAGCTTCCTC  843

seq1  TATCTTTGATGACTTAACTTTGAATCTGTGAGATAATATGGAAGAAGTGT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTGATGACTTAACTTTGAATCTGTGAGATAATATGGAAGAAGTGT  893

seq1  GTGTGCACCTGGCTGAAGACTGTCCCTCATCTTTTTTGAGCTATTATGAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCACCTGGCTGAAGACTGTCCCTCATCTTTTTTGAGCTATTATGAT  943

seq1  ATTCTCTCTCAGTGCCAAGCAGTGGTTGGAAATGCAGCTCAGTCAGCCAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTCTCAGTGCCAAGCAGTGGTTGGAAATGCAGCTCAGTCAGCCAC  993

seq1  GTGACCTCACGGGGCAGCCAGTACTGTCCAGTGCACACTATTAAGATGCA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCTCACGGGGCAGCCAGTACTGTCCAGTGCACACTATTAAGATGCA  1043

seq1  AAGTAGTAGATGGCAGAAATTCATTTTCTACTGGTGACATTTTCAATTAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGTAGATGGCAGAAATTCATTTTCTACTGGTGACATTTTCAATTAT  1093

seq1  GACAGAATTAGTGGTGTATTCCCCATCACCAGTCAAAGCACATCTCCCTG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAATTAGTGGTGTATTCCCCATCACCAGTCAAAGCACATCTCCCTG  1143

seq1  TACACTGAGTGACTTATGAATATCTGTTCCTTCTAATTTTGGAGGTTTGG  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGAGTGACTTATGAATATCTGTTCCTTCTAATTTTGGAGGTTTGG  1193

seq1  AATTC  1200
      |||||
seq2  AATTC  1198

seq1: chr16_34917918_34918454
seq2: B6Ng01-033F21.g_67_604

seq1  GAATTCAT-GCTGGTCCCTTCATGAATCCCTTGCCCTTTTCCTCCCAAAG  49
      |||||||| | |||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCGTTGGTCCCTTCATGAATCCCTTGCCCTTTTCCTCCCAAAG  50

seq1  TCTAGATTCCTCATTCCTCCCGGAGGCCATTGCCTTGGCCTTGGCTCTGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGATTCCTCATTCCTCCCGGAGGCCATTGCCTTGGCCTTGGCTCTGT  100

seq1  CCCCAGCAGAAAATGGAGCAAGTCAGTGGAAAGTTCTCCTGAGGAGTGCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCAGAAAATGGAGCAAGTCAGTGGAAAGTTCTCCTGAGGAGTGCA  150

seq1  TGCCAGGCCTGCCAGGGACCTTGTTCCCTCTCACTATTTTTGTCCTGACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGCCTGCCAGGGACCTTGTTCCCTCTCACTATTTTTGTCCTGACA  200

seq1  GAAGTCAGACCTAGCCCATGGAAGAGGGTCTTTCAAGAAGGAAGGCTGGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAGACCTAGCCCATGGAAGAGGGTCTTTCAAGAAGGAAGGCTGGT  250

seq1  AGCCAGGCAGTAGGGACGCACGCCTTTAATCCCAGCACTTGGAAGGCAGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGCAGTAGGGACGCACGCCTTTAATCCCAGCACTTGGAAGGCAGA  300

seq1  GGCAGGTGGATTTTTGAGATCAAGGACAGCCTGGTCTACAGAGTGAGTTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTGGATTTTTGAGATCAAGGACAGCCTGGTCTACAGAGTGAGTTC  350

seq1  CAGGACAGCCAAGGCTACACAGAGAAACCCTGTCAAAAAAAAAAAAAAAA  399
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAGGACAGCCAAGGCTACACAGAGAAACCCTGTC-AAAAAAAAAAAAAAA  399

seq1  AAAAGAGGGGAAAGAGGAAGAAGAGGAGGAGGAGGAAGGCTGGGAAGTGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGGGGAAAGAGGAAGAAGAGGAGGAGGAGGAAGGCTGGGAAGTGG  449

seq1  GGCTGTGAGACAACCAAGGGGGTGCAGTCTGTTCCTGTGGAGTAGTGGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGAGACAACCAAGGGGGTGCAGTCTGTTCCTGTGGAGTAGTGGAC  499

seq1  ATGGATGAGTTTTGACCTCCCCTTCCC-TTCGCCAGCCC  537
      ||||||||||||||||||| ||||||| |||||||||||
seq2  ATGGATGAGTTTTGACCTCTCCTTCCCTTTCGCCAGCCC  538