BAC Information

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BAC

Clone NameB6Ng01-033G23
Chromosome16 (Build37)
Map Location 33,180,660 - 33,340,473
singlet/doubletdoublet
Overlap geneOsbpl11, Snx4
Upstream geneBex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791
Downstream geneZfp148, Slc12a8, 4632417D23Rik, Heg1, Muc13, Itgb5, Umps, Kalrn, LOC100043670
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033G23.bB6Ng01-033G23.g
ACCDH862483DH862484
length7621,089
definitionDH862483|Mus musculus domesticus DNA, BAC clone: B6Ng01-033G23, 5' end.DH862484|Mus musculus domesticus DNA, BAC clone: B6Ng01-033G23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,339,712 - 33,340,473)(33,180,660 - 33,181,758)
sequence
gaattcatcgagcttcccctgcctcagactcctgtccaccaccatgcctg
gcccatgctcccctttccctccatactccatcttttaaaagttatccatt
tgatttgttatgtagggtctcacccatctcaggctggcttaatctatgaa
gccaaggatgcccttgcatcccgattctcctggctccacctcccaaatgc
tgagattaggggcacaaactaccatatctgatctaacagtcactggtgtt
aggaatgtaaggcaagctctctatcagttgagctattgctccccacaccc
cgcccttatattccttccttctgtcttgtcctgcaagctgcagtctgatg
ctccgatctcagatctgaaatgatcgattctggtgttctttcacatccct
gtctctgtggagatgaaagagagcaaacatggacaatgtccactttcctt
ttatggagatgaccccagaaggacaaagatggcagcaactagcacaaggg
aacctgggaaacagtctgttacacagctggaactgaggggtctgtcttta
aaggaagaggagaatgacagccagaaggaaaatgctctctcttgaaaagc
cagtagtcacctttgcaggtctggtcccgctctctagtctccagggaggg
gatggactgaactgagacaaagtagtctctgagaaagcctgggctgcctg
gtaatagaaaagcttggtagtttgaagagtaacagaatagcaaggttgtt
tgtgtaagaaag
gaattccatccccagaacccgcatggtggaagaagaaatgactcctggga
attgtctcctctctctctctctctctgaatgaataaatattttataataa
taataaagagtggctggggaagcctgtaaggagagaatggtgacctagaa
gctgaggtgactgtccctgcacactcaccaactgcacatgctggtgactc
cacataatattattaggattctgcacctacagagacatacagatgggtct
agttgtaaagtcagaatgtggctagaaaaaaaaaactacatttcatttgg
gggacaaaagtggcctttaaaaaaaaaaaaggttttggtgtgctgacctg
cagagatacaggatgtggctggatggttcaaacagcaggaacggcttttc
tcacagcttgggagggtgaaagtccaggacgaaggcacagtgtgtgtgct
ttctggtgtgggcccttttgctagcatacgtaactgttttcttccagcat
cctcagatgggagatctagctttctcagtctcttcctacacagtaactcc
taagacaaggacaactgtctacactaatccacaccacctgatttaactgt
aatcatcttttggaggtcctgcttccaaacaccatctcacggaagggaga
gttagggcttcaacaatctgtgggaatgaagacacagttcagtcctccac
agagatgttgttactacttgacagatgagggaaaacagatccagagaggt
tttttgggtcccttgcctaaagtcacatgggcagagctcatgtcagtttt
tacctcttgaagccactctgaagcttctcccacaaaagaggagatcttct
ggccagcaggttgctatggaatgtaccccaacctcccagcatccggcgtc
ccactgaaggttcagaaaatgcattcatcttctttattcaatcatggctt
tccctcctcttggatcactgagtgaaggtcaaatttaaacctaatactca
tacaggcaaaaacaaattctagctgggcctggtgatgccgggctatatcc
cacctagggggaagcccagactaaagtacaagttcaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_33339712_33340473
seq2: B6Ng01-033G23.b_46_807 (reverse)

seq1  CTTTCTTACACAAACAACCTTGCTATTCTGTTACTCTTCAAACTACCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTACACAAACAACCTTGCTATTCTGTTACTCTTCAAACTACCAAG  50

seq1  CTTTTCTATTACCAGGCAGCCCAGGCTTTCTCAGAGACTACTTTGTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTATTACCAGGCAGCCCAGGCTTTCTCAGAGACTACTTTGTCTCA  100

seq1  GTTCAGTCCATCCCCTCCCTGGAGACTAGAGAGCGGGACCAGACCTGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTCCATCCCCTCCCTGGAGACTAGAGAGCGGGACCAGACCTGCAA  150

seq1  AGGTGACTACTGGCTTTTCAAGAGAGAGCATTTTCCTTCTGGCTGTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACTACTGGCTTTTCAAGAGAGAGCATTTTCCTTCTGGCTGTCATT  200

seq1  CTCCTCTTCCTTTAAAGACAGACCCCTCAGTTCCAGCTGTGTAACAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTCCTTTAAAGACAGACCCCTCAGTTCCAGCTGTGTAACAGACT  250

seq1  GTTTCCCAGGTTCCCTTGTGCTAGTTGCTGCCATCTTTGTCCTTCTGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCCAGGTTCCCTTGTGCTAGTTGCTGCCATCTTTGTCCTTCTGGGG  300

seq1  TCATCTCCATAAAAGGAAAGTGGACATTGTCCATGTTTGCTCTCTTTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCCATAAAAGGAAAGTGGACATTGTCCATGTTTGCTCTCTTTCAT  350

seq1  CTCCACAGAGACAGGGATGTGAAAGAACACCAGAATCGATCATTTCAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAGAGACAGGGATGTGAAAGAACACCAGAATCGATCATTTCAGAT  400

seq1  CTGAGATCGGAGCATCAGACTGCAGCTTGCAGGACAAGACAGAAGGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATCGGAGCATCAGACTGCAGCTTGCAGGACAAGACAGAAGGAAGG  450

seq1  AATATAAGGGCGGGGTGTGGGGAGCAATAGCTCAACTGATAGAGAGCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAGGGCGGGGTGTGGGGAGCAATAGCTCAACTGATAGAGAGCTTG  500

seq1  CCTTACATTCCTAACACCAGTGACTGTTAGATCAGATATGGTAGTTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACATTCCTAACACCAGTGACTGTTAGATCAGATATGGTAGTTTGTG  550

seq1  CCCCTAATCTCAGCATTTGGGAGGTGGAGCCAGGAGAATCGGGATGCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAATCTCAGCATTTGGGAGGTGGAGCCAGGAGAATCGGGATGCAAG  600

seq1  GGCATCCTTGGCTTCATAGATTAAGCCAGCCTGAGATGGGTGAGACCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCCTTGGCTTCATAGATTAAGCCAGCCTGAGATGGGTGAGACCCTA  650

seq1  CATAACAAATCAAATGGATAACTTTTAAAAGATGGAGTATGGAGGGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACAAATCAAATGGATAACTTTTAAAAGATGGAGTATGGAGGGAAAG  700

seq1  GGGAGCATGGGCCAGGCATGGTGGTGGACAGGAGTCTGAGGCAGGGGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCATGGGCCAGGCATGGTGGTGGACAGGAGTCTGAGGCAGGGGAAG  750

seq1  CTCGATGAATTC  762
      ||||||||||||
seq2  CTCGATGAATTC  762

seq1: chr16_33180660_33181758
seq2: B6Ng01-033G23.g_68_1156

seq1  GAATTCCATCCCCAGAACCCGCATGGTGGAAGAAGAAATGACTCCTGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCCCCAGAACCCGCATGGTGGAAGAAGAAATGACTCCTGGGA  50

seq1  ATTGTCTCCTCTCTCTCTCTCTCTCTGAATGAATAAATATTTTATAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTCCTCTCTCTCTCTCTCTCTGAATGAATAAATATTTTATAATAA  100

seq1  TAATAAAGAGTGGCTGGGGAAGCCTGTAAGGAGAGAATGGTGACCTAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAGAGTGGCTGGGGAAGCCTGTAAGGAGAGAATGGTGACCTAGAA  150

seq1  GCTGAGGTGACTGTCCCTGCACACTCACCAACTGCACATGCTGGTGACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGTGACTGTCCCTGCACACTCACCAACTGCACATGCTGGTGACTC  200

seq1  CACATAATATTATTAGGATTCTGCACCTACAGAGACATACAGATGGGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAATATTATTAGGATTCTGCACCTACAGAGACATACAGATGGGTCT  250

seq1  AGTTGTAAAGTCAGAATGTGGCTAGAAAAAAAAAACTACATTTCATTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTAAAGTCAGAATGTGGCTAGAAAAAAAAAACTACATTTCATTTGG  300

seq1  GGGACAAAAGTGGCCTTTAAAAAAAAAAAAGGTTTTGGTGTGCTGACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAAAAGTGGCCTTTAAAAAAAAAAAAGGTTTTGGTGTGCTGACCTG  350

seq1  CAGAGATACAGGATGTGGCTGGATGGTTCAAACAGCAGGAACGGCTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATACAGGATGTGGCTGGATGGTTCAAACAGCAGGAACGGCTTTTC  400

seq1  TCACAGCTTGGGAGGGTGAAAGTCCAGGACGAAGGCACAGTGTGTGTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCTTGGGAGGGTGAAAGTCCAGGACGAAGGCACAGTGTGTGTGCT  450

seq1  TTCTGGTGTGGGCCCTTTTGCTAGCATACGTAACTGTTTTCTTCCAGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTGTGGGCCCTTTTGCTAGCATACGTAACTGTTTTCTTCCAGCAT  500

seq1  CCTCAGATGGGAGATCTAGCTTTCTCAGTCTCTTCCTACACAGTAACTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGATGGGAGATCTAGCTTTCTCAGTCTCTTCCTACACAGTAACTCC  550

seq1  TAAGACAAGGACAACTGTCTACACTAATCCACACCACCTGATTTAACTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAAGGACAACTGTCTACACTAATCCACACCACCTGATTTAACTGT  600

seq1  AATCATCTTTTGGAGGTCCTGCTTCCAAACACCATCTCACGGAAGGGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCTTTTGGAGGTCCTGCTTCCAAACACCATCTCACGGAAGGGAGA  650

seq1  GTTAGGGCTTCAACAATCTGTGGGAATGAAGACACAGTTCAGTCCTCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGGCTTCAACAATCTGTGGGAATGAAGACACAGTTCAGTCCTCCAC  700

seq1  AGAGATGTTGTTACTACTTGACAGATGAGGGAAAACAGATCCAGAGAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGTTGTTACTACTTGACAGATGAGGGAAAACAGATCCAGAGAGGT  750

seq1  TTATTGGGTCCCTTGCCTAAAGTCACATGGGCAGAGCTCATGTCAG-TTT  799
      || ||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTTTGGGTCCCTTGCCTAAAGTCACATGGGCAGAGCTCATGTCAGTTTT  800

seq1  TACCTCTTGAAGCCACTCTGAAGCTTCTCCCACAGAAGAGGAGATCTACT  849
      |||||||||||||||||||||||||||||||||| |||||||||||| ||
seq2  TACCTCTTGAAGCCACTCTGAAGCTTCTCCCACAAAAGAGGAGATCTTCT  850

seq1  GGCCAGCAGGATTGCTATGGAAGGCACCCCAACCTCCCAGCATCCGGCGT  899
      |||||||||| ||||||||||| | |||||||||||||||||||||||||
seq2  GGCCAGCAGG-TTGCTATGGAATGTACCCCAACCTCCCAGCATCCGGCGT  899

seq1  CCCACTGAAGGTTTCAGAAAAGTGCATTCATCTTCTTTATTCAAATCATG  949
      ||||||||||| ||||||||| |||||||||||||||||||| |||||||
seq2  CCCACTGAAGG-TTCAGAAAA-TGCATTCATCTTCTTTATTC-AATCATG  946

seq1  GCTTCCCCTCTCCTTGGA-CACTGAGTGAAGGTCAGATTTAGACCCTAAT  998
      |||| |||||  |||||| |||||||||||||||| ||||| | ||||||
seq2  GCTTTCCCTCCTCTTGGATCACTGAGTGAAGGTCAAATTTA-AACCTAAT  995

seq1  ACACAATAACAAGCAAAAACAAATATCTAGCTGGGCCTGGTGATG-CAGG  1047
      || ||   ||| |||||||||||| |||||||||||||||||||| | ||
seq2  ACTCA--TACAGGCAAAAACAAAT-TCTAGCTGGGCCTGGTGATGCCGGG  1042

seq1  CTGTAATCCCAGCTATGGGGGAATGCCGAGATCAGAAATCACAAGTTCAA  1097
      || | |||||| ||| ||||||| ||| |||    |||  ||||||||||
seq2  CTAT-ATCCCACCTA-GGGGGAA-GCCCAGA--CTAAAGTACAAGTTCAA  1087

seq1  GG  1099
      ||
seq2  GG  1089