BAC Information

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BAC

Clone NameB6Ng01-033N18
Chromosome16 (Build37)
Map Location 31,921,500 - 32,048,471
singlet/doubletdoublet
Overlap geneLOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2
Upstream geneAI480653, Centb2, Ppp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2
Downstream genePigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033N18.bB6Ng01-033N18.g
ACCDH862792DH862793
length797824
definitionDH862792|Mus musculus domesticus DNA, BAC clone: B6Ng01-033N18, 5' end.DH862793|Mus musculus domesticus DNA, BAC clone: B6Ng01-033N18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,921,500 - 31,922,294)(32,047,785 - 32,048,471)
sequence
gaattcacacaaaagtcagcatcctgtgaccaaatgatccagcacgcaag
cctcttggtacttatttaaatgaactaaaatctcaaagctcatgaaacct
ggacaaacatgtttggaatagctttatccaaactgcccaaggcaccttta
acgggtgagtggatggcccagcctctccagacaatggagtattgagtgct
aagaagtcatggtgaccaggggaacacttctgagcatattattaagtgaa
aggtgagcgtagagtatttatacagccgcttctgactatacgacctggaa
aacacaaagatcgagatggtaacagggtgagcggtgactggagctagcca
gaatgaagctgaagaaggatttcatcctagtgatgaaaccgttctctgtg
ggatcagttcctccaaagccatgcaataggtgactccaagagtaaggccc
aaggaaaccagagttcattggctggaacagtatgccacaccttggcaggg
tgggaaagtacagggctcaggaaagaagggagtatgggaatgtcactgaa
tagaggcaaggtttctctttgtctttgtctctgtctcctttgttcatctc
tcccttcttcctctctctttccttccttccttccttcccttttctctcct
ttttccaatatatttttttcttttttgagaattgcatgggctgtattttg
atcattgaggtggtttgaatgaaagtggcttccataggcccataaggagt
ggcactattaggaggcctttaatggaggaagttggggatgggctttg
tctgccaagtgctgggatcgcaagacactaggctcaacttcagatgaggc
tgttcttcacagtgacttcagttaggtgacatggagaaaaaggcagtggc
cttaagatttcatgtcaacatgtgacttgggattttactgcctcttccta
ctgctgccgttttgttattaaataggtttcagaagtgattcaagaatttt
ccatggtctatgacaagcaaacgtggaaaatggacttacatttttaaaca
tgaatatatttcgtcactaaatctagggtttcttcctcctcctcttcttt
ttctcttttgttttgttttgttttgttttttttcgagactgaatttctct
gtgtagccctggctgccctggaactcactctgtagaccaggctggccttg
aactcagaaatcccaagtgctgggactaaaggctaaaggcatgtgccacc
accaccacccggcttctcttttttttaaaaaaaaagatttatttatatat
tttatgtatgagacataccagaagagggcatcagatcccattacagatgg
ttgtgagccaccatgtggttgctgggaactgaactcaggacctctaaaag
agcagtcaatgctcttaactgctgagccatctctccagccccctctcctt
cctcttcctctttttcctcctcctcccctctttcttccctcctccttgtt
tttggtcagtggtggtggtacacacctttaatctcaacactcaagaggca
ggcagatctctgagtttaaggccagcctggtctatagaaagctttccata
gcagccaggactatacagagaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_31921500_31922294
seq2: B6Ng01-033N18.b_45_841

seq1  GAATTCACACAAAAGTCAGCATCCTGTGACCAAATGATCCAGCACGCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACAAAAGTCAGCATCCTGTGACCAAATGATCCAGCACGCAAG  50

seq1  CCTCTTGGTACTTATTTAAATGAACTAAAATCTCAAAGCTCATGAAACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGGTACTTATTTAAATGAACTAAAATCTCAAAGCTCATGAAACCT  100

seq1  GGACAAACATGTTTGGAATAGCTTTATCCAAACTGCCCAAGGCACCTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAACATGTTTGGAATAGCTTTATCCAAACTGCCCAAGGCACCTTTA  150

seq1  ACGGGTGAGTGGATGGCCCAGCCTCTCCAGACAATGGAGTATTGAGTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGTGAGTGGATGGCCCAGCCTCTCCAGACAATGGAGTATTGAGTGCT  200

seq1  AAGAAGTCATGGTGACCAGGGGAACACTTCTGAGCATATTATTAAGTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTCATGGTGACCAGGGGAACACTTCTGAGCATATTATTAAGTGAA  250

seq1  AGGTGAGCGTAGAGTATTTATACAGCCGCTTCTGACTATACGACCTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGCGTAGAGTATTTATACAGCCGCTTCTGACTATACGACCTGGAA  300

seq1  AACACAAAGATCGAGATGGTAACAGGGTGAGCGGTGACTGGAGCTAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAAGATCGAGATGGTAACAGGGTGAGCGGTGACTGGAGCTAGCCA  350

seq1  GAATGAAGCTGAAGAAGGATTTCATCCTAGTGATGAAACCGTTCTCTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAGCTGAAGAAGGATTTCATCCTAGTGATGAAACCGTTCTCTGTG  400

seq1  GGATCAGTTCCTCCAAAGCCATGCAATAGGTGACTCCAAGAGTAAGGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGTTCCTCCAAAGCCATGCAATAGGTGACTCCAAGAGTAAGGCCC  450

seq1  AAGGAAACCAGAGTTCATTGGCTGGAACAGTATGCCACACCTTGGCAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAACCAGAGTTCATTGGCTGGAACAGTATGCCACACCTTGGCAGGG  500

seq1  TGGGAAAGTACAGGGCTCAGGAAAGAAGGGAGTATGGGAATGTCACTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAGTACAGGGCTCAGGAAAGAAGGGAGTATGGGAATGTCACTGAA  550

seq1  TAGAGGCAAGGTTTCTCTTTGTCTTTGTCTCTGTCTCCTTTGTTCATCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGCAAGGTTTCTCTTTGTCTTTGTCTCTGTCTCCTTTGTTCATCTC  600

seq1  TCCCTTCTTCCTCTCTCTTTCCTTCCTTCCTTCCTTCCCTTTTCTCTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCTTCCTCTCTCTTTCCTTCCTTCCTTCCTTCCCTTTTCTCTCCT  650

seq1  TTTTCCAATATATTTTTTTCTTTTTTGAGAATTGCATGGGCTGTATTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAATATATTTTTTTCTTTTTTGAGAATTGCATGGGCTGTATTTTG  700

seq1  ATCATTGAGGTGGTTTGAATGAAAGTGGCTTCCATAGGCCCATAAGGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGAGGTGGTTTGAATGAAAGTGGCTTCCATAGGCCCATAAGGAGT  750

seq1  GGCACTATTAGGAGGCC-TTAATGGAGGAAG-TGGGGATGGGCTTTG  795
      ||||||||||||||||| ||||||||||||| |||||||||||||||
seq2  GGCACTATTAGGAGGCCTTTAATGGAGGAAGTTGGGGATGGGCTTTG  797

seq1: chr16_32047785_32048471
seq2: B6Ng01-033N18.g_83_770 (reverse)

seq1  GGAAG-AAGAGGGGAGGAGGAGGAAAAAGAGGAAGAGGAAGGAGAGGGGG  49
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAAGAGGGGAGGAGGAGGAAAAAGAGGAAGAGGAAGGAGAGGGGG  50

seq1  CTGGAGAGATGGCTCAGCAGTTAAGAGCATTGACTGCTCTTTTAGAGGTC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAGATGGCTCAGCAGTTAAGAGCATTGACTGCTCTTTTAGAGGTC  100

seq1  CTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTCAGTTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATG  150

seq1  GGATCTGATGCCCTCTTCTGGTATGTCTCATACATAAAATATATAAATAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGATGCCCTCTTCTGGTATGTCTCATACATAAAATATATAAATAA  200

seq1  ATCTTTTTTTTTAAAAAAAAGAGAAGCCGGGTGGTGGTGGTGGCACATGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTTTTTAAAAAAAAGAGAAGCCGGGTGGTGGTGGTGGCACATGC  250

seq1  CTTTAGCCTTTAGTCCCAGCACTTGGGATTTCTGAGTTCAAGGCCAGCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCCTTTAGTCCCAGCACTTGGGATTTCTGAGTTCAAGGCCAGCCT  300

seq1  GGTCTACAGAGTGAGTTCCAGGGCAGCCAGGGCTACACAGAGAAATTCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTACAGAGTGAGTTCCAGGGCAGCCAGGGCTACACAGAGAAATTCAG  350

seq1  TCTCGAAAAAAAACAAAACAAAACAAAACAAAAGAGAAAAAGAAGAGGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGAAAAAAAACAAAACAAAACAAAACAAAAGAGAAAAAGAAGAGGAG  400

seq1  GAGGAAGAAACCCTAGATTTAGTGACGAAATATATTCATGTTTAAAAATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGAAACCCTAGATTTAGTGACGAAATATATTCATGTTTAAAAATG  450

seq1  TAAGTCCATTTTCCACGTTTGCTTGTCATAGACCATGGAAAATTCTTGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCCATTTTCCACGTTTGCTTGTCATAGACCATGGAAAATTCTTGAA  500

seq1  TCACTTCTGAAACCTATTTAATAACAAAACGGCAGCAGTAGGAAGAGGCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCTGAAACCTATTTAATAACAAAACGGCAGCAGTAGGAAGAGGCA  550

seq1  GTAAAATCCCAAGTCACATGTTGACATGAAATCTTAAGGCCACTGCCTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATCCCAAGTCACATGTTGACATGAAATCTTAAGGCCACTGCCTTT  600

seq1  TTCTCCATGTCACCTAACTGAAGTCACTGTGAAGAACAGCCTCATCTGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCATGTCACCTAACTGAAGTCACTGTGAAGAACAGCCTCATCTGAA  650

seq1  GTTGAGCCTAGTGTCTTGCGATCCCAGCACTTGGCAGA  687
      ||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGCCTAGTGTCTTGCGATCCCAGCACTTGGCAGA  688