BAC Information

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BAC

Clone NameB6Ng01-034J14
Chromosome16 (Build37)
Map Location 31,893,111 - 32,013,912
singlet/doubletdoublet
Overlap geneMfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5
Upstream geneAI480653, Centb2, Ppp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1
Downstream genePak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034J14.bB6Ng01-034J14.g
ACCDH863303DH863304
length968936
definitionDH863303|Mus musculus domesticus DNA, BAC clone: B6Ng01-034J14, 5' end.DH863304|Mus musculus domesticus DNA, BAC clone: B6Ng01-034J14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,012,922 - 32,013,912)(31,893,111 - 31,894,037)
sequence
gaattccaggacagccaagtctacacagagaaattctgctttcccccacc
ccacctccaaaagaaagaaatcagagaaggacttgacaagagtcagttct
ctccttccccagtgggttctggggatttaactcgggtcttagagcatcgc
gggcatttaccactgagccatctgcctggcccttcaccagctctttttag
tctttctgaatgacttctgtcacattaggcacagttgacttgactcacaa
aaataaaaagtgttcctgggtgggagagatggacagtgggctgatgtact
tgtgagcaaggccttgagttcaaatacctagaacctacgtaactgctgga
cgggtaagtgggagcacttgtaatctcaatgtgtcatgggcaggtgggac
gtttagacggtaatccgtagaagctaatgagtgtgctggtcttgtacgca
gaaaaagagaccctgtctcaaggaggaagctgaggaccaacacctgatgt
tatttatcctctgacctctaactgttcactgtaagcatgtgcccacattt
acacacaactactttcacagaacatacatggtatataattacaaagcttt
tgctagtttgagacaaagtttctctatataatcctagctgtcctggaaat
ttgaatatataaacacacacacacacaccacctgcttctgcctccagagc
actgagaaaaagaaatacacagttgtgtccaagcatgcacaaaatgtaga
taagaaatatgaaagagaaaaaataaagttgactggagaacagctcagtc
attaaatcacagtcatgaggccccaagttcagatatcaggaatgctgtta
ctctagctccaagagtctaatgccgcttctgggctttgagccaaagagat
gcaccttatgcagacagacagacaacaagatacatctttaaagctgtgca
agcagtgtgtgtttgcct
gaattcaagttcatatcccactgcagggtgatacctgcaccttagctggt
ctgcaggtatttctggggccctgagacctgtgggctctcctctgaccact
ggtcagaagcaggtcagtgcctggtgcagagaaggccactcaagtcacac
caaggcagcacccagccatgttcaccacacaagcaattgtgtctcctgca
gtcaccttccgaagcccaagacactcaggtccccagaagccacctctgag
atcctgcctgtgtacagaacctctcagctctagccctgcacccacgcaag
tggagaagccacatctgggttaaagctggagtccacgcccacagcacctc
agtgtttgtgcttctgtctaccctgcagtgccctggctctgaaattccaa
aaccccacactcagtcatctttgccctttcctaatgatgtctgtctttcc
agagacaccacaaagggcacagctgtggcccagagcaggaaggaatttag
acactgaggaaaaacatcagtagttaaaactcaagagtgttcagaggtca
ctgaggtcacaggacatggccccagcccagctggaaacagccctccctgt
tgccataggccggcctccctgcccaacctccctacctgagtcagagggcc
tgccctccagtgaaggaaactggcttagttccccagtctggtagagaagg
cagtgggagactggatgccatgacacttgtgactctcagagtccttttag
tgtctttgactctatgttggcacccacctggcattcactctgggaagggg
aggtcaagtgatcactttaagacagagaaatgtggactcccctgggtagc
ttttcttggggagctcttgcgaacagccacctgctccagcaaccacacat
ttctgaggattcaggctcccccgcttctacccgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32012922_32013912
seq2: B6Ng01-034J14.b_48_1015 (reverse)

seq1  AGGCAAAACAACCACAC-CTGCTTTGCACAGCTTTTTAAAAAGATGTATC  49
      |||||||     ||||| |||| ||||||||||||    |||||||||||
seq2  AGGCAAA-----CACACACTGC-TTGCACAGCTTT----AAAGATGTATC  40

seq1  TTGTCTGTCTGTCTGTCTGCATAAAGGTGCATCTCTTTGTGGCTCAAAGC  99
      |||| ||||||||||||||||| ||||||||||||||  |||||||||||
seq2  TTGT-TGTCTGTCTGTCTGCAT-AAGGTGCATCTCTT--TGGCTCAAAGC  86

seq1  CCAGAAGGCGGCATTAGACCTCTTGGAGCTAGAGTTACAGGCATTTCCTG  149
      |||||| ||||||||||| |||||||||||||||| ||| ||| ||||||
seq2  CCAGAA-GCGGCATTAGA-CTCTTGGAGCTAGAGTAACA-GCA-TTCCTG  132

seq1  ATATCTGAACTTGGGGCCTCATGACTGTTGATTTTAATGACTGAGCTTGT  199
      ||||||||||||||||||||||||||| ||| |||||||||||||| |||
seq2  ATATCTGAACTTGGGGCCTCATGACTG-TGA-TTTAATGACTGAGC-TGT  179

seq1  TCTCCAGTCAAACTTTATTTTTTCTCTTTCATATTTCTTTATCTACATTT  249
      ||||||||| ||||||||||||||||||||||||||| ||||||||||||
seq2  TCTCCAGTC-AACTTTATTTTTTCTCTTTCATATTTC-TTATCTACATTT  227

seq1  TGTGCATGCTTGGACACAACTGTGTATTTCTTTATTCTCAGTGCTCTGGA  299
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGTGCATGCTTGGACACAACTGTGTATTTCTTT-TTCTCAGTGCTCTGGA  276

seq1  GGCAGAAGCAGGTGGTGTGTGTGTGTGTGTTTATATATTCATATTTCCAG  349
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGCAGAAGCAGGTGGTGTGTGTGTGTGTGTTTATATATTCAAATTTCCAG  326

seq1  GACAGCTAGGATTATATAGAGAAACTTTGTCTCAAACTAGCAAAAGCTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTAGGATTATATAGAGAAACTTTGTCTCAAACTAGCAAAAGCTTT  376

seq1  GTAATTATATACCATGTATGTTCTGTGAAAGTAGTTGTGTGTAAATGTGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTATATACCATGTATGTTCTGTGAAAGTAGTTGTGTGTAAATGTGG  426

seq1  GCACATGCTTACAGTGAACAGTTAGAGGTCAGAGGATAAATAACATCAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGCTTACAGTGAACAGTTAGAGGTCAGAGGATAAATAACATCAGG  476

seq1  TGTTGGTCCTCAGCTTCCTCCTTGAGACAGGGTCTCTTTTTCTGCGTACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTCCTCAGCTTCCTCCTTGAGACAGGGTCTCTTTTTCTGCGTACA  526

seq1  AGACCAGCACACTCATTAGCTTCTACGGATTACCGTCTAAACGTCCCACC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGCACACTCATTAGCTTCTACGGATTACCGTCTAAACGTCCCACC  576

seq1  TGCCCATGACACATTGAGATTACAAGTGCTCCCACTTACCCGTCCAGCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATGACACATTGAGATTACAAGTGCTCCCACTTACCCGTCCAGCAG  626

seq1  TTACGTAGGTTCTAGGTATTTGAACTCAAGGCCTTGCTCACAAGTACATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGTAGGTTCTAGGTATTTGAACTCAAGGCCTTGCTCACAAGTACATC  676

seq1  AGCCCACTGTCCATCTCTCCCACCCAGGAACACTTTTTATTTTTGTGAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCACTGTCCATCTCTCCCACCCAGGAACACTTTTTATTTTTGTGAGT  726

seq1  CAAGTCAACTGTGCCTAATGTGACAGAAGTCATTCAGAAAGACTAAAAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAACTGTGCCTAATGTGACAGAAGTCATTCAGAAAGACTAAAAAG  776

seq1  AGCTGGTGAAGGGCCAGGCAGATGGCTCAGTGGTAAATGCCCGCGATGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGTGAAGGGCCAGGCAGATGGCTCAGTGGTAAATGCCCGCGATGCT  826

seq1  CTAAGACCCGAGTTAAATCCCCAGAACCCACTGGGGAAGGAGAGAACTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGACCCGAGTTAAATCCCCAGAACCCACTGGGGAAGGAGAGAACTGA  876

seq1  CTCTTGTCAAGTCCTTCTCTGATTTCTTTCTTTTGGAGGTGGGGTGGGGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTCAAGTCCTTCTCTGATTTCTTTCTTTTGGAGGTGGGGTGGGGG  926

seq1  AAAGCAGAATTTCTCTGTGTAGACTTGGCTGTCCTGGAATTC  991
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGAATTTCTCTGTGTAGACTTGGCTGTCCTGGAATTC  968

seq1: chr16_31893111_31894037
seq2: B6Ng01-034J14.g_68_1003

seq1  GAATTCAAGTTCATATCCCACTGCAGGGTGATACCTGCACCTTAGCTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTTCATATCCCACTGCAGGGTGATACCTGCACCTTAGCTGGT  50

seq1  CTGCAGGTATTTCTGGGGCCCTGAGACCTGTGGGCTCTCCTCTGACCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGGTATTTCTGGGGCCCTGAGACCTGTGGGCTCTCCTCTGACCACT  100

seq1  GGTCAGAAGCAGGTCAGTGCCTGGTGCAGAGAAGGCCACTCAAGTCACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGAAGCAGGTCAGTGCCTGGTGCAGAGAAGGCCACTCAAGTCACAC  150

seq1  CAAGGCAGCACCCAGCCATGTTCACCACACAAGCAATTGTGTCTCCTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAGCACCCAGCCATGTTCACCACACAAGCAATTGTGTCTCCTGCA  200

seq1  GTCACCTTCCGAAGCCCAAGACACTCAGGTCCCCAGAAGCCACCTCTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTTCCGAAGCCCAAGACACTCAGGTCCCCAGAAGCCACCTCTGAG  250

seq1  ATCCTGCCTGTGTACAGAACCTCTCAGCTCTAGCCCTGCACCCACGCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCCTGTGTACAGAACCTCTCAGCTCTAGCCCTGCACCCACGCAAG  300

seq1  TGGAGAAGCCACATCTGGGTTAAAGCTGGAGTCCACGCCCACAGCACCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAGCCACATCTGGGTTAAAGCTGGAGTCCACGCCCACAGCACCTC  350

seq1  AGTGTTTGTGCTTCTGTCTACCCTGCAGTGCCCTGGCTCTGAAATTCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTGTGCTTCTGTCTACCCTGCAGTGCCCTGGCTCTGAAATTCCAA  400

seq1  AACCCCACACTCAGTCATCTTTGCCCTTTCCTAATGATGTCTGTCTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCACACTCAGTCATCTTTGCCCTTTCCTAATGATGTCTGTCTTTCC  450

seq1  AGAGACACCACAAAGGGCACAGCTGTGGCCCAGAGCAGGAAGGAA-TTAG  499
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGAGACACCACAAAGGGCACAGCTGTGGCCCAGAGCAGGAAGGAATTTAG  500

seq1  ACACTGAGGAAAAACATCAGTAGTTAAAACTCAAGAGTGTTCAGAGGTCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAGGAAAAACATCAGTAGTTAAAACTCAAGAGTGTTCAGAGGTCA  550

seq1  CTGAGGTCACAGGACATGGCCCCAGCCCAGCTGGAAACAGCCCTCCCTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTCACAGGACATGGCCCCAGCCCAGCTGGAAACAGCCCTCCCTGT  600

seq1  TGCCATAGGCCGGCCTCCCTGCCCAACCTCCCTACCTGAGTCAGAGGGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATAGGCCGGCCTCCCTGCCCAACCTCCCTACCTGAGTCAGAGGGCC  650

seq1  TGCCCTCCAGTGAAGGAAACTGGCTTAGTTCCCCAGTCTGGTAGAGAAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCCAGTGAAGGAAACTGGCTTAGTTCCCCAGTCTGGTAGAGAAGG  700

seq1  CAGTGGGAGACTGGATGCCATGACACTTGTGACTCTCAGAGTCC-TTTAG  748
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAGTGGGAGACTGGATGCCATGACACTTGTGACTCTCAGAGTCCTTTTAG  750

seq1  TGTCTTTGACTCTATG-TGGCACCCACCTGGCATTCACTCTGGGAA-GGG  796
      |||||||||||||||| ||||||||||||||||||||||||||||| |||
seq2  TGTCTTTGACTCTATGTTGGCACCCACCTGGCATTCACTCTGGGAAGGGG  800

seq1  AGGTCAAGTGATCACTTTAAGACAGAGATAATGT-GACTCCCCTGGGTAG  845
      |||||||||||||||||||||||||||| ||||| |||||||||||||||
seq2  AGGTCAAGTGATCACTTTAAGACAGAGA-AATGTGGACTCCCCTGGGTAG  849

seq1  CTTTTCTTGGGAAGCTC-TGCGAACAGCCACCTGCTTCAGC-ACCACACA  893
      ||||||||||| ||||| |||||||||||||||||| |||| ||||||||
seq2  CTTTTCTTGGGGAGCTCTTGCGAACAGCCACCTGCTCCAGCAACCACACA  899

seq1  -TTCTGAGGATTCAGGCT-CCCCGC-TCTACCCGAGA  927
       ||||||||||||||||| |||||| |||||||||||
seq2  TTTCTGAGGATTCAGGCTCCCCCGCTTCTACCCGAGA  936