BAC Information

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BAC

Clone NameB6Ng01-035L12
Chromosome16 (Build37)
Map Location 86,222,815 - 86,223,731
singlet/doubletsinglet
Overlap genenone
Upstream geneCyyr1, LOC100039994, LOC622000, Adamts1, Adamts5, LOC100040025
Downstream geneLOC100039780
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035L12.bB6Ng01-035L12.g
ACCDH864113DH864114
length543900
definitionDH864113|Mus musculus domesticus DNA, BAC clone: B6Ng01-035L12, 5' end.DH864114|Mus musculus domesticus DNA, BAC clone: B6Ng01-035L12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcctaaaatttatgttttctgtctcagcattaatgtgcttcctattaaca
tatttacattgaaagttattgaggcctaaaacattttatactatgtgcct
atgagatttgatttgaataactactactatgtaaaatgcaatctatgaga
attttttttttagaaaataagtctatgcgcaaaattcttgataggaatga
ttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgaatgaatgaatg
aatgataatctagccatgaagtaaaggttaacaactgaactgtcatgtac
acactgagttgcaggaaaagggaagcatcactttttctaatacattgaca
ctgggtgtatcaaccactccaggacatatctcttgttcataagtagttca
ccaacatacagtgcattcctcagtatttttgtgtgcttttagttgattac
agtttgatgaggtttttttatttgtttcttttgggatgtgctttttatat
tgttgtcttggttttggggagtttttgtggttgtattggtttt

gaattctataaatgaacatacggacttctaggtggtagagctatatctga
gtttacccatgcttacacaaaacattttgtaaaaaaaactataataacca
tatttgctaaactggacttccaaagaatccattcttatatctgtcatttc
atctctcacttgaatgagtcaatattccatatgtatcccgggaaaagtca
tttgtcatagtgaacaaacatgaagtaaaatctgcaaacatggagaccga
tataggaactaatctgagatgactctgaagagaagagagacagaaagaag
ggaacaaggtacaatgtttgtcagaatgtgtccaccactcaagaccgtta
ctttgttgtagttgttgtttggttagttaggtttttgtcttgtttttgtt
ttctgtttgcttgcttcttttcagagaagaaaaactttaaaggtcttaag
agtgagagtgatttgaagttactagactttaggggttgaataacggatgt
cattggggttttacaaaaataactttctaaagaacattgggagaacagct
gagattgaataatgacctgaatttctgccaatcagcaggctgatgaaaca
tttcccagccacgctcagcctccagaggactgacacactgaaaacacatg
gtgaaaccgatcagagaatgagagtctgactaggcaggggtggtgctaga
atgtgatgggaaggaatgagatcccagatagagtcacataaaatgactgg
cttcatcaggcatgggttgtgagtaggaccattgatgaggccagacaagc
agcatcaggatattagggatgggagttttataagttctactgtactcatg
tacttataaatagcacagagattgccttaacatatcatttaagtgctggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_86222815_86223731
seq2: B6Ng01-035L12.g_67_966

seq1  GAATTCTATAAATGAACATACGGACTTCTAGGTGGTAGAGCTATATCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAAATGAACATACGGACTTCTAGGTGGTAGAGCTATATCTGA  50

seq1  GTTTACCCATGCTTACACAAAACATTTTGTAAAAAAAACTATAATAACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCCATGCTTACACAAAACATTTTGTAAAAAAAACTATAATAACCA  100

seq1  TATTTGCTAAACTGGACTTCCAAAGAATCCATTCTTATATCTGTCATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCTAAACTGGACTTCCAAAGAATCCATTCTTATATCTGTCATTTC  150

seq1  ATCTCTCACTTGAATGAGTCAATATTCCATATGTATCCCGGGAAAAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCACTTGAATGAGTCAATATTCCATATGTATCCCGGGAAAAGTCA  200

seq1  TTTGTCATAGTGAACAAACATGAAGTAAAATCTGCAAACATGGAGACCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCATAGTGAACAAACATGAAGTAAAATCTGCAAACATGGAGACCGA  250

seq1  TATAGGAACTAATCTGAGATGACTCTGAAGAGAAGAGAGACAGAAAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGAACTAATCTGAGATGACTCTGAAGAGAAGAGAGACAGAAAGAAG  300

seq1  GGAACAAGGTACAATGTTTGTCAGAATGTGTCCACCACTCAAGACCGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAAGGTACAATGTTTGTCAGAATGTGTCCACCACTCAAGACCGTTA  350

seq1  CTTTGTTGTAGTTGTTGTTTGGTTAGTTAGGTTTTTGTCTTGTTTTTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTGTAGTTGTTGTTTGGTTAGTTAGGTTTTTGTCTTGTTTTTGTT  400

seq1  TTCTGTTTGCTTGCTTCTTTTCAGAGAAGAAAAACTTTAAAGGTCTTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTGCTTGCTTCTTTTCAGAGAAGAAAAACTTTAAAGGTCTTAAG  450

seq1  AGTGAGAGTGATTTGAAGTTACTAGACTTTAGGGGTTGAATAACGGATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGAGTGATTTGAAGTTACTAGACTTTAGGGGTTGAATAACGGATGT  500

seq1  CATTGGGGTTTTACAAAAATAACTTTCTAAAGAACATTGGGAGAACAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGGGTTTTACAAAAATAACTTTCTAAAGAACATTGGGAGAACAGCT  550

seq1  GAGATTGAATAATGACCTGAATTTCTGCCAATCAGCAGGCTGATGAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGAATAATGACCTGAATTTCTGCCAATCAGCAGGCTGATGAAACA  600

seq1  TTCCCCAGCCACGCTCAGCCTCCAGAGGACTGACACACTGAAAACACATG  650
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAGCCACGCTCAGCCTCCAGAGGACTGACACACTGAAAACACATG  650

seq1  GTGAAACCGATCAGAGAATGAGAGTCTGACTAGGCAGGTGTGGTGCTAGA  700
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTGAAACCGATCAGAGAATGAGAGTCTGACTAGGCAGGGGTGGTGCTAGA  700

seq1  ATGTGATGGGAAGGAATGAGATCCCAGAATAGAGTTCACATAAAATGACT  750
      ||||||||||||||||||||||||||| |||||| |||||||||||||||
seq2  ATGTGATGGGAAGGAATGAGATCCCAG-ATAGAG-TCACATAAAATGACT  748

seq1  GGCTTCATCAGGCATGGG-TGTGAGTAAGAACCATTGATGAGGCCAGACA  799
      |||||||||||||||||| ||||||| || ||||||||||||||||||||
seq2  GGCTTCATCAGGCATGGGTTGTGAGT-AGGACCATTGATGAGGCCAGACA  797

seq1  AGCAGCATCAGGATATTAAGGGATTGGGAGTTTTTATAAGTTTCTAACTG  849
      ||||||||||||||||| ||||| |||||| ||||||||| |||| ||||
seq2  AGCAGCATCAGGATATT-AGGGA-TGGGAG-TTTTATAAG-TTCT-ACTG  842

seq1  TACTCCATGTAACTAATAAAATAGCACAAGAGAAATTGCCTTAAAACATA  899
      |||| ||||| ||| || |||||||||   ||| ||||||||  ||||||
seq2  TACT-CATGT-ACTTAT-AAATAGCAC---AGAGATTGCCTT--AACATA  884

seq1  TCTATTTAAAGTGCTGGG  917
      || |||| ||||||||||
seq2  TC-ATTT-AAGTGCTGGG  900


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