BAC Information

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BAC

Clone NameB6Ng01-036C09
Chromosome16 (Build37)
Map Location 61,121,816 - 61,122,879
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha6, LOC100043804, EG668168, LOC668170
Downstream geneLOC100043524, LOC668183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036C09.bB6Ng01-036C09.g
ACCDH864417DH864418
length1,036945
definitionDH864417|Mus musculus domesticus DNA, BAC clone: B6Ng01-036C09, 5' end.DH864418|Mus musculus domesticus DNA, BAC clone: B6Ng01-036C09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatcattaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtaagaatggctaagctcaaatctcaggtgacagca
gatgctggcaaggatgtggagaaagagaaacactcctccattgttggtga
gattgcaaacttgtacaaccactctagaaatcagcctggcagttcctcag
aaaattggatatagtactaccagaggatcccgcaatacctctcctgggca
tattcctgcctcactgctttagcatcctaccaacatacatggtttcagtg
atgctcattctgctcatctatcatcccctaggacacaacttactacaagt
atgtccaaatatgaaaaaaaaattaccaattccaagaaatgctatgaaaa
tatgattccctaaatgggttaaaataatgttaaggttagacctcttaaaa
tattcaaacactgcctctcaacactattgcaccatgtaatgtagatttaa
gagtcataggatcatttgtgggtcagttgcttaggacataagaacatagg
atccttaaaacagggaaaataatgcatttatgcctactaagcttcttttc
tttccttttaaatttgcttgtgttctgctacctttcttttccctttgttt
agttaattacatagtttttttcctgatagttcagtaaagaataagcatta
ttatttccatatttcaagcttctagtttggattatataatattgtattag
aagacagcaaatatgttactttgagttttttaggacccacacttactcaa
taaaggaaatatacagttactatggaggaataaatacactaaataatttt
atctcattttcaaagtagagtatcagtctgaaaatatatctatgttatac
ataaattttcaaatgttcattcttcatataatacacattatatctaaagt
actgatagcatacgatgttgttttactatccttaat

gaattctttgttcagctctgagccccattttttaaggcagctatttgatt
ttctggagtccaccctcttgagttctttatacatattggatattagtccc
ctatctgatttaagataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgaattgcagaagctttgcagtttca
tgaggtcccatttgacaatcctcgatcttaaagcacaagccattgctgtt
ctattcaggaattttttccctgtgcccatatctttgagacttttctccac
tttctcctctataagtttcagtgtctctggttgtatgtggagttccttga
tccacttaaatttgaccttagtacaaggagagaggaatgggtccattcgc
attcttctacatgataacaaccagttgtaccagcaccatttgttgaaaat
gctgtctttctttcactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggtttcatttttgggtcttcaattctattccattg
gtctacttgtctgtcactaaagaagtaccataatattttttaagcacaat
tggttctgcagtaaagctttaggtcaagcatggtgattccaccagagtac
tttttatccttgaaagagcttttgctatcctaaatttttgttattaagat
gaatttgcagatgctcttctaattcttgaagaattagttggattttgatg
ggattgcattgaatctgtagattgctttggcagatagcatttacatgtga
cctgccatcatgacatggagatcttcatctctgagatctcttaatttctt
cttcaggacttgaagttatcatcgactttcattcttagtaagtccgcaga
attattattgtgctttggacggtgtgtccattctttcgcttttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_61121816_61122879
seq2: B6Ng01-036C09.b_50_1085

seq1  GAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGAAAAAATG  50

seq1  TTCAGCATCATTAATCATCAGAGAAATGCAAATCAAAACAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATCATTAATCATCAGAGAAATGCAAATCAAAACAACCCTGAGAT  100

seq1  TCCACCTCACACCAGTAAGAATGGCTAAGCTCAAATCTCAGGTGACAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACACCAGTAAGAATGGCTAAGCTCAAATCTCAGGTGACAGCA  150

seq1  GATGCTGGCAAGGATGTGGAGAAAGAGAAACACTCCTCCATTGTTGGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGGCAAGGATGTGGAGAAAGAGAAACACTCCTCCATTGTTGGTGA  200

seq1  GATTGCAAACTTGTACAACCACTCTAGAAATCAGCCTGGCAGTTCCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCAAACTTGTACAACCACTCTAGAAATCAGCCTGGCAGTTCCTCAG  250

seq1  AAAATTGGATATAGTACTACCAGAGGATCCCGCAATACCTCTCCTGGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGGATATAGTACTACCAGAGGATCCCGCAATACCTCTCCTGGGCA  300

seq1  TATTCCTGCCTCACTGCTTTAGCATCCTACCAACATACATGGTTTCAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTGCCTCACTGCTTTAGCATCCTACCAACATACATGGTTTCAGTG  350

seq1  ATGCTCATTCTGCTCATCTATCATCCCCTAGGACACAACTTACTACAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCATTCTGCTCATCTATCATCCCCTAGGACACAACTTACTACAAGT  400

seq1  ATGTCCAAATATGAAAAAAAAATTACCAATTCCAAGAAATGCTATGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCAAATATGAAAAAAAAATTACCAATTCCAAGAAATGCTATGAAAA  450

seq1  TATGATTCCCTAAATGGGTTAAAATAATGTTAAGGTTAGACCTCTTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTCCCTAAATGGGTTAAAATAATGTTAAGGTTAGACCTCTTAAAA  500

seq1  TATTCAAACACTGCCTCTCAACACTATTGCACCATGTAATGTAGATTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAACACTGCCTCTCAACACTATTGCACCATGTAATGTAGATTTAA  550

seq1  GAGTCATAGGATCATTTGTGGGTCAGTTGCTTAGGACATAAGAACATAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATAGGATCATTTGTGGGTCAGTTGCTTAGGACATAAGAACATAGG  600

seq1  ATCCTTAAAACAGGGAAAATAATGCATTTATGCCTACTAAGCTTCTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTAAAACAGGGAAAATAATGCATTTATGCCTACTAAGCTTCTTTTC  650

seq1  TTTCCTTTTAAATTTGCTTGTGTTCTGCTACCTTTCTTTTCCCTTTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTTAAATTTGCTTGTGTTCTGCTACCTTTCTTTTCCCTTTGTTT  700

seq1  AGTTAATTACATAGTTTTTTTCCTGATAGTTCAGTAAAGAATAAGCATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATTACATAGTTTTTTTCCTGATAGTTCAGTAAAGAATAAGCATTA  750

seq1  TTATTTCCATATTTCAAGCTTCTAGTTTGGATTATATAATATTGTATTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCATATTTCAAGCTTCTAGTTTGGATTATATAATATTGTATTAG  800

seq1  AAGACAGCAAAATATGTTACTTTGAGTTTTTTAGGACCCACACTTACTCA  850
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGC-AAATATGTTACTTTGAGTTTTTTAGGACCCACACTTACTCA  849

seq1  ATAAAAGGAAATATAACAAGTTACTATGGAGGAATAAATACACTAAAATA  900
      || ||||||||||||   |||||||||||||||||||||||||| |||||
seq2  AT-AAAGGAAATATA--CAGTTACTATGGAGGAATAAATACACT-AAATA  895

seq1  ATTTTATCTCATTTTTCAAAGTAGAGTTATCAAGTTCTTGAAAATATATC  950
      ||||||||||| |||||||||||||| |||| |||   ||||||||||||
seq2  ATTTTATCTCA-TTTTCAAAGTAGAG-TATC-AGT--CTGAAAATATATC  940

seq1  TAATTGTTATACATAAAATTTTCATATTGTTTCATTTCTTTCAATAATTA  1000
      ||  |||||||||| ||||||||| ||   |||| |||||   |||||  
seq2  TA--TGTTATACAT-AAATTTTCAAAT--GTTCA-TTCTTCATATAAT--  982

seq1  TTAACACATTATATCTAAAGTACTGATAGCAATACTGTAATGTTGTTTTT  1050
         ||||||||||||||||||||||||||| ||||    |||||| ||||
seq2  ---ACACATTATATCTAAAGTACTGATAGC-ATAC---GATGTTG-TTTT  1024

seq1  ACTAATCTCTTAAT  1064
      ||| ||| ||||||
seq2  ACT-ATC-CTTAAT  1036


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