BAC Information

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BAC

Clone NameB6Ng01-036C11
Chromosome16 (Build37)
Map Location 32,160,207 - 32,256,060
singlet/doubletdoublet
Overlap geneLrrc33, Bex6, Fbxo45, Wdr53
Upstream geneCentb2, Ppp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik
Downstream gene2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791, Osbpl11, Snx4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036C11.bB6Ng01-036C11.g
ACCDH864421DH864422
length8211,015
definitionDH864421|Mus musculus domesticus DNA, BAC clone: B6Ng01-036C11, 5' end.DH864422|Mus musculus domesticus DNA, BAC clone: B6Ng01-036C11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,255,456 - 32,256,060)(32,160,207 - 32,161,243)
sequence
gaattctctttgaagaccaagctggcctcaaagatctacctgcctctgtc
tcccacgtgctggcattaaagatgtgcaccactaccatcactacactacc
actcccaccaggcatggaaggcagatatctatgcattcaaggtcagcttg
gtctacatagttagatccagaccatccaatgctacacagtgagcccttat
ctcaaaaaacaaacaaacaagcaaacaaaccaccaaacacacacacacac
accaactaaacaaaaaaaccaaatacaacaacagaaaaacagaaatcttt
aaaaaaatatttcatatttgacttgccaaagaaattcttggtttgtttca
aaccaggtctcactaggtagagcaagctagctttgaacttatggtgaccc
ttctgcctgtttgttcagtgttaggaccagaagcacgtaccaccatgcct
agcttagactctttcttctttatctggggccagggaataccagtggggag
tgggtgttttttctttccttaagatttttaatttttatttatttattttt
tttcgagacagggttcctctgtgtagccctggctgtcctggaactcactt
tgtagaccaggctggcctcgaactcagaaatccgcctgactctgcctccc
aagtgctgggattaaaggcgtgtgccaccactgcccggctcctagactct
tttttaatatatcagaaatctttgtatgcgcacacgtgtgtatgtggggt
atatgtatagttgtacaacccagcaaacccagatttgggaaacagagcag
gaattcaagcgcattttctga
gaattctgtgaaatggcaccaaagcacttgtcacatacaaagctcaagat
gtctcccgagcaaatatgtcaggtctggccaggctctaccctcacttctg
cttgaatggaggcgtaagggctacaacagccccctccccaccaccccaaa
cagcgcttttcctatagagactgcttcaagcacttactatctgctcaaac
gcctccgtttccacagggccacagatgagtgaattggctccttgtgtggt
cagggctagcccatccaaaccaagagaggtcagctcactctgtcccttcc
atggccacagaatgcgtctagccacagattgtcaaaaatgcaagtgtgtt
ccctccaacaggtaacagctggctcttgtgtgtctcgctgtggctggcaa
tgagtgtcccctttgtatatgagaaaaatgcatgatctcttcggaggccc
accctgcgttgcattagtttctctgttcttttcacaggttcattcccact
agtcacttctgtaagagtaagggcttcttcaagaggaaacaggaccaccc
ggcagagccttcagcagccccactcagggggcagactcatgccttggtga
aagccaggtaccagtgaaaccaatgggaagtggaggtcttctgtgctaat
gagtcactatgaaggaaaaactagatgaaggagccatgccttctccttca
ttcctggcatgcccatgaatcttggactttcctggggggaggtgactacc
cagagtctggagggcaccatacgcaaagaccacagagatacttgaggcta
attttagcctggagtcaaatgaaaatacggatcttccacctagtttcttt
taagggacaaagatcaccacctaacaggaactcctacaatgcaaagttta
atgaaatgctgcgtccctgtgggaccggaggcataacaaactgtgctgag
tgctgggactgagctacaagtgggcttgatgcctcgagaatggaagtttc
gtcaactctagtctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32255456_32256060
seq2: B6Ng01-036C11.b_47_651 (reverse)

seq1  CTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGGAACCCTGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGGAACCCTGTCT  50

seq1  CGAAAAAAAATAAATAAATAAAAATTAAAAATCTTAAGGAAAGAAAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAAAAAATAAATAAATAAAAATTAAAAATCTTAAGGAAAGAAAAAAC  100

seq1  ACCCACTCCCCACTGGTATTCCCTGGCCCCAGATAAAGAAGAAAGAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTCCCCACTGGTATTCCCTGGCCCCAGATAAAGAAGAAAGAGTCT  150

seq1  AAGCTAGGCATGGTGGTACGTGCTTCTGGTCCTAACACTGAACAAACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGGCATGGTGGTACGTGCTTCTGGTCCTAACACTGAACAAACAGG  200

seq1  CAGAAGGGTCACCATAAGTTCAAAGCTAGCTTGCTCTACCTAGTGAGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGGTCACCATAAGTTCAAAGCTAGCTTGCTCTACCTAGTGAGACC  250

seq1  TGGTTTGAAACAAACCAAGAATTTCTTTGGCAAGTCAAATATGAAATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGAAACAAACCAAGAATTTCTTTGGCAAGTCAAATATGAAATATT  300

seq1  TTTTTAAAGATTTCTGTTTTTCTGTTGTTGTATTTGGTTTTTTTGTTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAGATTTCTGTTTTTCTGTTGTTGTATTTGGTTTTTTTGTTTAG  350

seq1  TTGGTGTGTGTGTGTGTGTTTGGTGGTTTGTTTGCTTGTTTGTTTGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTGTGTGTGTGTGTTTGGTGGTTTGTTTGCTTGTTTGTTTGTTTT  400

seq1  TTGAGATAAGGGCTCACTGTGTAGCATTGGATGGTCTGGATCTAACTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATAAGGGCTCACTGTGTAGCATTGGATGGTCTGGATCTAACTATG  450

seq1  TAGACCAAGCTGACCTTGAATGCATAGATATCTGCCTTCCATGCCTGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCAAGCTGACCTTGAATGCATAGATATCTGCCTTCCATGCCTGGTG  500

seq1  GGAGTGGTAGTGTAGTGATGGTAGTGGTGCACATCTTTAATGCCAGCACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGTAGTGTAGTGATGGTAGTGGTGCACATCTTTAATGCCAGCACG  550

seq1  TGGGAGACAGAGGCAGGTAGATCTTTGAGGCCAGCTTGGTCTTCAAAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGACAGAGGCAGGTAGATCTTTGAGGCCAGCTTGGTCTTCAAAGAG  600

seq1  AATTC  605
      |||||
seq2  AATTC  605

seq1: chr16_32160207_32161243
seq2: B6Ng01-036C11.g_69_1083

seq1  GAATTCTGTGAAATGGCACCAAAGCACTTGTCACATACAAAGCTCAAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGAAATGGCACCAAAGCACTTGTCACATACAAAGCTCAAGAT  50

seq1  GTCTCCCGAGCAAATATGTCAGGTCTGGCCAGGCTCTACCCTCACTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCCGAGCAAATATGTCAGGTCTGGCCAGGCTCTACCCTCACTTCTG  100

seq1  CTTGAATGGAGGCGTAAGGGCTACAACAGCCCCCTCCCCACCACCCCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATGGAGGCGTAAGGGCTACAACAGCCCCCTCCCCACCACCCCAAA  150

seq1  CAGCGCTTTTCCTATAGAGACTGCTTCAAGCACTTACTATCTGCTCAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGCTTTTCCTATAGAGACTGCTTCAAGCACTTACTATCTGCTCAAAC  200

seq1  GCCTCCGTTTCCACAGGGCCACAGATGAGTGAATTGGCTCCTTGTGTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCGTTTCCACAGGGCCACAGATGAGTGAATTGGCTCCTTGTGTGGT  250

seq1  CAGGGCTAGCCCATCCAAACCAAGAGAGGTCAGCTCACTCTGTCCCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTAGCCCATCCAAACCAAGAGAGGTCAGCTCACTCTGTCCCTTCC  300

seq1  ATGGCCACAGAATGCGTCTAGCCACAGATTGTCAAAAATGCAAGTGTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCACAGAATGCGTCTAGCCACAGATTGTCAAAAATGCAAGTGTGTT  350

seq1  CCCTCCAACAGGTAACAGCTGGCTCTTGTGTGTCTCGCTGTGGCTGGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCAACAGGTAACAGCTGGCTCTTGTGTGTCTCGCTGTGGCTGGCAA  400

seq1  TGAGTGTCCCCTTTGTATATGAGAAAAATGCATGATCTCTTCGGAGGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTCCCCTTTGTATATGAGAAAAATGCATGATCTCTTCGGAGGCCC  450

seq1  ACCCTGCGTTGCATTAGTTTCTCTGTTCTTTTCACAGGTTCATTCCCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGCGTTGCATTAGTTTCTCTGTTCTTTTCACAGGTTCATTCCCACT  500

seq1  AGTCACTTCTGTAAGAGTAAGGGCTTCTTCAAGAGGAAACAGGACCACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTTCTGTAAGAGTAAGGGCTTCTTCAAGAGGAAACAGGACCACCC  550

seq1  GGCAGAGCCTTCAGCAGCCCCACTCAGGGGGCAGACTCATGCCTTGGTG-  599
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGCAGAGCCTTCAGCAGCCCCACTCAGGGGGCAGACTCATGCCTTGGTGA  600

seq1  AAGCCAGGTACCAGTG-AACCAATGGGAAGTGGAGGTCTTCTGTGCTAAT  648
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAGCCAGGTACCAGTGAAACCAATGGGAAGTGGAGGTCTTCTGTGCTAAT  650

seq1  GAGTCACTATGAAGGAAAAACTAAGATGAAGGAGCCATGCCTTCTCCTTC  698
      |||||||||||||||||||||| |||||||||||||||||||||||||| 
seq2  GAGTCACTATGAAGGAAAAACT-AGATGAAGGAGCCATGCCTTCTCCTT-  698

seq1  CATTCCTGGCAATGCCCATGAATCTTGGACTTCCCT-GGGGGAGGTGACT  747
      |||||||||| ||||||||||||||||||||| ||| |||||||||||||
seq2  CATTCCTGGC-ATGCCCATGAATCTTGGACTTTCCTGGGGGGAGGTGACT  747

seq1  ACCCAGAGTCTGTAGGGCACCATACGCAAAGACCACAGAGATTACTTGAG  797
      |||||||||||| |||||||||||||||||||||||||||| ||||||||
seq2  ACCCAGAGTCTGGAGGGCACCATACGCAAAGACCACAGAGA-TACTTGAG  796

seq1  GCTAATTTTAGCCTGGAGTCAGAATGAAAATACCGACTCTCCAACTCAGT  847
      ||||||||||||||||||||| ||||||||||| || ||| | ||  |||
seq2  GCTAATTTTAGCCTGGAGTCA-AATGAAAATACGGA-TCTTCCACCTAGT  844

seq1  TTCTTTTAGAAGGCACAAAGGATCACCACCTAACAGGGACTCCTAACAAG  897
      |||||||  |||| ||||| ||||||||||||||||| |||||| |||| 
seq2  TTCTTTT--AAGGGACAAA-GATCACCACCTAACAGGAACTCCT-ACAA-  889

seq1  TGCACAGTTTAGTAGAAATGCTGGCGTCCCTGTGGGACCGGAGGCATACA  947
      |||| |||||| | |||||||| |||||||||||||||||||||||||  
seq2  TGCAAAGTTTAAT-GAAATGCT-GCGTCCCTGTGGGACCGGAGGCATAAC  937

seq1  AAACTGTGGCTGAGTGCCTGTGACTGGAGGCATACAGAAGTGTGGCTGAG  997
      ||||||| |||||||| ||| |||| |||   |||  ||||| ||||   
seq2  AAACTGT-GCTGAGTG-CTGGGACT-GAG--CTAC--AAGTG-GGCTTGA  979

seq1  TGCTCGGAGAATGGAGAGTTTCCGTTCAAACTCTAGTCTC  1037
      |||   ||||||||| ||||| |||   ||||||||||||
seq2  TGCCTCGAGAATGGA-AGTTT-CGT--CAACTCTAGTCTC  1015