BAC Information

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BAC

Clone NameB6Ng01-037I10
Chromosome16 (Build37)
Map Location 76,155,774 - 76,282,156
singlet/doubletdoublet
Overlap gene4930578N18Rik, LOC100039457
Upstream geneD930038D03Rik, Rbm11, Stch, LOC546667, Samsn1
Downstream geneNrip1, LOC100039316, 1700063K16Rik, LOC665120, Usp25
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037I10.bB6Ng01-037I10.g
ACCDH865363DH865364
length1,0801,039
definitionDH865363|Mus musculus domesticus DNA, BAC clone: B6Ng01-037I10, 5' end.DH865364|Mus musculus domesticus DNA, BAC clone: B6Ng01-037I10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,155,774 - 76,156,862)(76,281,110 - 76,282,156)
sequence
gaattctaaattcagatatgctcctttaactcggtattgaaaattatgtt
aaagcagtaacaatagtaatgtagtatttattgacttataaaataattct
aattaaaatacactgacaatgtgccaaatgctattggatatgtttgtaat
agatagtagactaaggtacaaaactgtattttgctaatacaaagttcctt
tatttcaagcagtaccagaagaaaaaatactgctcactgatttgccaata
agcaatattaaaggagaaggcaaatagaatgatctatctaaacagcagag
ctcatcattcagtagaatccataagaacagcaggtcacatcctccggccg
ctatttttaaagacctgaaaataatagtactctaagctcagccttattca
gattccagagctgatgattgggtgtgaccagagacaaacgaagccttgga
acaatttcccaggagtcccattcacatggggatatggtagccccgcaact
tttttttgtttacaaaattgttttttatagacgcaataaagatcaaaata
taaaagcccacatgaatacttgtccactctatttctgaaaaaaaaaaaaa
agagtaacaaagctagacaaaataatctaataaaaatcctgcagaaaaga
cagcctggctagcagtctgtgatagaataccatccaagactgctgataag
gacagggctaaggattgattttgaagtttagacagtgcaaggccaaagtc
tagcttcttgccttccagccacgttattagagagtggcttaagccttcct
agttcctttctttcaccgtgatcagggatcagaatagtacctacttcaaa
agattccctgcaaaggacatatgcatctgtgacatagcagtgagcacctg
ggaactcatcatttttattattaatactggtgacttttcttgtacccagt
gcgtttcgtttctaaagctccaccagtgaattacgtggttcgtttgcatg
ctttcctgtcacctcgtagatgactcttactgcactaggtacatcttttc
aagaagcacattaatggtttatcaaataat
gaattcatttcctatcccttgagaagaaataagatcttgtctgaaacttc
gttgcacccagaatatttgtgactagccctgaaaatgtaaatctagagta
tattcaggatgagtaggtgttttcggtgacgatgaaccagttcactctct
ctagtgaagcagtgctgataaaggccattcccaatttccactcgttataa
gactggaggttgtaaggaagagaggagggatgtctgccgtcaaggctttt
taacataaaagggatattttggagttagtccttaattgaaggaccatgag
gacagatggctatagtaagaatgagaacagcagttacaagtccagcatcc
ctgcttttgcttaagtgaggtcatttccttatgtcccagatttgactttc
tggactgaaaagggaaaaaaaaaaaataagtttttgctttttttgcttga
gaaaagcaggatgtcttttaatcttaactatttaaaggataatcctttct
tcctacatcaaagataagaagtctgttgggaatctatacatttaaatcag
atttatttctagtgtgtttttgtcctggggtaagaatgtaggctcctgga
aaccatggacttcatggtgatcaaaagccgtataggtaaaatttggatct
gaaatgtgccccaagggtggcactgctgagaaggggtggagcctgagaat
acgctatgctctctagcacgagctcttcatggcatcccttcatctcttcc
tggccacaaggaggttgctttgccctgcctcgtgctccccatcagcttgt
ggcttcacaggcccaaagcaataaggccatcgatgatcactgaccaactc
taaactacaagccaaaataagccttctctgtcataagacatttgtgtcca
gtgttcattacacgctcactatttgcaatgttccagtggctttgcagtac
ctatcactcaaataagttttaattaaaaagtggtgcatgaagcaccatgt
tgccatacacaaccatgcaagttcccttctataagtaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_76155774_76156862
seq2: B6Ng01-037I10.b_43_1122

seq1  GAATTCTAAATTCAGATATGCTCCTTTAACTCGGTATTGAAAATTATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAATTCAGATATGCTCCTTTAACTCGGTATTGAAAATTATGTT  50

seq1  AAAGCAGTAACAATAGTAATGTAGTATTTATTGACTTATAAAATAATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGTAACAATAGTAATGTAGTATTTATTGACTTATAAAATAATTCT  100

seq1  AATTAAAATACACTGACAATGTGCCAAATGCTATTGGATATGTTTGTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAATACACTGACAATGTGCCAAATGCTATTGGATATGTTTGTAAT  150

seq1  AGATAGTAGACTAAGGTACAAAACTGTATTTTGCTAATACAAAGTTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGTAGACTAAGGTACAAAACTGTATTTTGCTAATACAAAGTTCCTT  200

seq1  TATTTCAAGCAGTACCAGAAGAAAAAATACTGCTCACTGATTTGCCAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAAGCAGTACCAGAAGAAAAAATACTGCTCACTGATTTGCCAATA  250

seq1  AGCAATATTAAAGGAGAAGGCAAATAGAATGATCTATCTAAACAGCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATATTAAAGGAGAAGGCAAATAGAATGATCTATCTAAACAGCAGAG  300

seq1  CTCATCATTCAGTAGAATCCATAAGAACAGCAGGTCACATCCTCCGGCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCATTCAGTAGAATCCATAAGAACAGCAGGTCACATCCTCCGGCCG  350

seq1  CTATTTTTAAAGACCTGAAAATAATAGTACTCTAAGCTCAGCCTTATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTAAAGACCTGAAAATAATAGTACTCTAAGCTCAGCCTTATTCA  400

seq1  GATTCCAGAGCTGATGATTGGGTGTGACCAGAGACAAACGAAGCCTTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCAGAGCTGATGATTGGGTGTGACCAGAGACAAACGAAGCCTTGGA  450

seq1  ACAATTTCCCAGGAGTCCCATTCACATGGGGATATGGTAGCCCCGCAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTCCCAGGAGTCCCATTCACATGGGGATATGGTAGCCCCGCAACT  500

seq1  TTTTTTTGTTTACAAAATTGTTTTTTATAGACGCAATAAAGATCAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGTTTACAAAATTGTTTTTTATAGACGCAATAAAGATCAAAATA  550

seq1  TAAAAGCCCACATGAATACTTGTCCACTCTATTTCTGAAAAAAAAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCCCACATGAATACTTGTCCACTCTATTTCTGAAAAAAAAAAAAA  600

seq1  AGAGTAACAAAGCTAGACAAAATAATCTAATAAAAATCCTGCAGAAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAACAAAGCTAGACAAAATAATCTAATAAAAATCCTGCAGAAAAGA  650

seq1  CAGCCTGGCTAGCAGTCTGTGATAGAATACCATCCAAGACTGCTGATAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGCTAGCAGTCTGTGATAGAATACCATCCAAGACTGCTGATAAG  700

seq1  GACAGGGCTAAGGATTGATTTTGAAG-TTAGACAGTGCAAGGCCAAAGTC  749
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GACAGGGCTAAGGATTGATTTTGAAGTTTAGACAGTGCAAGGCCAAAGTC  750

seq1  TAGCTTCTTGCCTTCCAGCCACGTTATTAGAGAGTGGCTTAAGCCTTCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCTTGCCTTCCAGCCACGTTATTAGAGAGTGGCTTAAGCCTTCCT  800

seq1  AGTTCCTTTCTTTCACCGTGATCAGGGATCAGAATAGTACCTACTTCAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTTTCTTTCACCGTGATCAGGGATCAGAATAGTACCTACTTCAAA  850

seq1  AGATTCCCTGCAAAGGACATATGCATCTGTGACATAGCAGTGAGCACCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCCTGCAAAGGACATATGCATCTGTGACATAGCAGTGAGCACCTG  900

seq1  GGAACTCATCATTTTTATTATTATTACTGGTGACTTTTCTTGTACCCAGT  949
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGAACTCATCATTTTTATTATTAATACTGGTGACTTTTCTTGTACCCAGT  950

seq1  GCGTTTTCGTTTTCTTAAAGCTCCACCAAGTGAATTTACGTGTGTTCGTT  999
      ||| ||||||||   |||||||||||| |||||| ||||||| |||||||
seq2  GCG-TTTCGTTT--CTAAAGCTCCACC-AGTGAA-TTACGTG-GTTCGTT  994

seq1  TGCATGCTTTCCTGTCACCCTCGTAGAATGACTCTTACTGCACTA-GTAC  1048
      ||||||||||||||||| |||||||| |||||||||||||||||| ||||
seq2  TGCATGCTTTCCTGTCA-CCTCGTAG-ATGACTCTTACTGCACTAGGTAC  1042

seq1  ATTCTTTTCAAAGAAGCAACATTTAATGG-TTATCAAATTAT  1089
      | ||||||| ||||||| ||| ||||||| ||||||||| ||
seq2  A-TCTTTTC-AAGAAGC-ACA-TTAATGGTTTATCAAATAAT  1080

seq1: chr16_76281110_76282156
seq2: B6Ng01-037I10.g_70_1108 (reverse)

seq1  GTTACTCATAGAAGGGAAACTTGCAT-GTGGTGTATGGCAAACATTGGCT  49
      |||||| ||||||||| ||||||||| || ||||||||| |||||  | |
seq2  GTTACTTATAGAAGGG-AACTTGCATGGTTGTGTATGGC-AACAT--GGT  46

seq1  GCTTCTTGCA-CACTTTTTAAATAAAACCTATTTTGATGTGATAGATACT  98
      ||||| |||| |||||||||| |||||| || ||||| ||||||| ||||
seq2  GCTTCATGCACCACTTTTTAATTAAAACTTA-TTTGA-GTGATAGGTACT  94

seq1  GCAAAGCCACTGAAACATTGCAAAATAGTGAGCGTGTAATGAACACTGGA  148
      |||||||||||| |||||||| ||||||||||||||||||||||||||||
seq2  GCAAAGCCACTGGAACATTGC-AAATAGTGAGCGTGTAATGAACACTGGA  143

seq1  CACAATTGTCTTATGACAGAGAATGGCTTATTTTGGCTTGTAGTTTTAGA  198
      ||||| ||||||||||||||||| ||||||||||||||||||| ||||||
seq2  CACAAATGTCTTATGACAGAGAA-GGCTTATTTTGGCTTGTAG-TTTAGA  191

seq1  GTTGGTCAGTGATCATTCGATGGCCTTATTGCTTTGGGCCTGTGACGCCA  248
      ||||||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  GTTGGTCAGTGATCA-TCGATGGCCTTATTGCTTTGGGCCTGTGAAGCCA  240

seq1  CAAGCTGATGGGGAGCACGAGGCAGGGCAAAGCAACCTCCTTGTGGCCAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGATGGGGAGCACGAGGCAGGGCAAAGCAACCTCCTTGTGGCCAG  290

seq1  GAAGAGATGAAGGGATGCCATGAAGAGCTCGTGCTAGAGAGCATAGCGTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGATGAAGGGATGCCATGAAGAGCTCGTGCTAGAGAGCATAGCGTA  340

seq1  TTCTCAGGCTCCACCCCTTCTCAGCAGTGCCACCCTTGGGGCACATTTCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGGCTCCACCCCTTCTCAGCAGTGCCACCCTTGGGGCACATTTCA  390

seq1  GATCCAAATTTTACCTATACGGCTTTTGATCACCATGAAGTCCATGGTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAAATTTTACCTATACGGCTTTTGATCACCATGAAGTCCATGGTTT  440

seq1  CCAGGAGCCTACATTCTTACCCCAGGACAAAAACACACTAGAAATAAATC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGCCTACATTCTTACCCCAGGACAAAAACACACTAGAAATAAATC  490

seq1  TGATTTAAATGTATAGATTCCCAACAGACTTCTTATCTTTGATGTAGGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAAATGTATAGATTCCCAACAGACTTCTTATCTTTGATGTAGGAA  540

seq1  GAAAGGATTATCCTTTAAATAGTTAAGATTAAAAGACATCCTGCTTTTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGATTATCCTTTAAATAGTTAAGATTAAAAGACATCCTGCTTTTCT  590

seq1  CAAGCAAAAAAAGCAAAAACTTATTTTTTTTTTTTCCCTTTTCAGTCCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAAAAAAGCAAAAACTTATTTTTTTTTTTTCCCTTTTCAGTCCAG  640

seq1  AAAGTCAAATCTGGGACATAAGGAAATGACCTCACTTAAGCAAAAGCAGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAAATCTGGGACATAAGGAAATGACCTCACTTAAGCAAAAGCAGG  690

seq1  GATGCTGGACTTGTAACTGCTGTTCTCATTCTTACTATAGCCATCTGTCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGGACTTGTAACTGCTGTTCTCATTCTTACTATAGCCATCTGTCC  740

seq1  TCATGGTCCTTCAATTAAGGACTAACTCCAAAATATCCCTTTTATGTTAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTCCTTCAATTAAGGACTAACTCCAAAATATCCCTTTTATGTTAA  790

seq1  AAAGCCTTGACGGCAGACATCCCTCCTCTCTTCCTTACAACCTCCAGTCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTTGACGGCAGACATCCCTCCTCTCTTCCTTACAACCTCCAGTCT  840

seq1  TATAACGAGTGGAAATTGGGAATGGCCTTTATCAGCACTGCTTCACTAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACGAGTGGAAATTGGGAATGGCCTTTATCAGCACTGCTTCACTAGA  890

seq1  GAGAGTGAACTGGTTCATCGTCACCGAAAACACCTACTCATCCTGAATAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGAACTGGTTCATCGTCACCGAAAACACCTACTCATCCTGAATAT  940

seq1  ACTCTAGATTTACATTTTCAGGGCTAGTCACAAATATTCTGGGTGCAACG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGATTTACATTTTCAGGGCTAGTCACAAATATTCTGGGTGCAACG  990

seq1  AAGTTTCAGACAAGATCTTATTTCTTCTCAAGGGATAGGAAATGAATTC  1047
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCAGACAAGATCTTATTTCTTCTCAAGGGATAGGAAATGAATTC  1039