BAC Information

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BAC

Clone NameB6Ng01-037O05
Chromosome16 (Build37)
Map Location 36,942,497 - 36,943,196
singlet/doubletsinglet
Overlap geneHcls1
Upstream geneParp9, Kpna1, Wdr5b, 2310056P07Rik, Ccdc58, Csta, Stfa2l1, EG433016, EG627962, EG408196, 2010005H15Rik, Stfa1, EG209324, LOC100038854, BC100530, LOC639105, Stfa2, Stfa3, Casr, EG667232, Cd86, Ildr1, LOC667246, Slc15a2, LOC667023, Eaf2, Iqcb1, LOC628101, Golgb1
Downstream geneFbxo40, LOC100043252, Polq, Stxbp5l, Gtf2e1, Rabl3, Hgd, Ndufb4, LOC100043709, Fstl1, LOC100043264, Lrrc58, Gpr156, LOC100043271
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037O05.bB6Ng01-037O05.g
ACCDH865619DH865620
length544897
definitionDH865619|Mus musculus domesticus DNA, BAC clone: B6Ng01-037O05, 5' end.DH865620|Mus musculus domesticus DNA, BAC clone: B6Ng01-037O05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tctcatgtatcctggaaactctggctcctgtcaaagttaccgcccccaca
acccccacaggagaagcatggttagtagtcacatagtcaaagtcccaagc
ttctgaccttcaggctaaactcctccccagttacctagcaacagtaaaca
gcagcataccataaaaagggctgtttggccccacctcactctctcactct
cttgctcttactctcctctctcctctccttactctcctctcttcctttct
cctcattctcccttttactctctagcctttcttctctctctctctctctc
tctctctctctctctctctctctctgtgtggggaagggggggggccagcg
actgcccggtcaaggaccgatgaacagaccggcgcctgggtgggaaccgg
ggtaggtgaagcgacccccagatagcgcctggacttctgggtatcactcc
gggacccaaatctggaaggaccgtgggccacacccatccagtggtgtcag
tggcttatatgtacacccggggttgagtggaaagcatctggcag
gaattcccgtgatcaactgccccctttccctaggattgctctcctcttta
aagccgctgagtatatttagtccggctttaacaagatgccatactcactg
cataggcatggacctctttaggagtacgtaaaagccatcattcccttaat
acagcttattttaaaaactcagtgctgttaatgtgtaataattataaacc
agtgaattttgataacactacaaggaaccaccaatacggtgaggacagag
aagatttcaggcacactagcagtcctgtgtgtgtctgtagtcagtgcccc
ttgctgaatatacaagcactgacttattttccatccatgtggcataggta
ctagggtctctctaaagtttcagtaaataaataacaaagactgttcatct
cttttgtgttggttttcttttattcagcatgtttttgaactctggttaga
gagttgtatatattggtcttttatttcccgttactgtcaaacagtatcta
ttgtgtagctatggtaccatttgatttgttcattgatctgatgctattcc
aaatatattctgagtgtttgagcacatctctctcctttgacatatatttt
tatattttccaaggtatacttaaagatctaattgcttattcatacagtca
gtgagtgtttacctttttagaaactaccaatctattttccaaaaagaaat
tttgtcatagatcatttctaccagaaatgtatgtgttgcacttgttccgt
gtcctttgtcagcacttgttattgttggtattttgaatgttggccactct
gtgggtatgcagagatgttaatttgtgtttcttgggtgagtaaacctatt
aagcatttttcatgtgctcatttcatgtctctcacctatcttctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_36942497_36943196
seq2: B6Ng01-037O05.g_67_766

seq1  GAATTCCCGTGATCAACTGCCCCCTTTCCCTAGGATTGCTCTCCTCTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCGTGATCAACTGCCCCCTTTCCCTAGGATTGCTCTCCTCTTTA  50

seq1  AAGCCGCTGAGTATATTTAGTCCGGCTTTAACAAGATGCCATACTCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCGCTGAGTATATTTAGTCCGGCTTTAACAAGATGCCATACTCACTG  100

seq1  CATAGGCATGGACCTCTTTAGGAGTACGTAAAAGCCATCATTCCCTTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGCATGGACCTCTTTAGGAGTACGTAAAAGCCATCATTCCCTTAAT  150

seq1  ACAGCTTATTTTAAAAACTCAGTGCTGTTAATGTGTAATAATTATAAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTATTTTAAAAACTCAGTGCTGTTAATGTGTAATAATTATAAACC  200

seq1  AGTGAATTTTGATAACACTACAAGGAACCACCAATACGGTGAGGACAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATTTTGATAACACTACAAGGAACCACCAATACGGTGAGGACAGAG  250

seq1  AAGATTTCAGGCACACTAGCAGTCCTGTGTGTGTCTGTAGTCAGTGCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTCAGGCACACTAGCAGTCCTGTGTGTGTCTGTAGTCAGTGCCCC  300

seq1  TTGCTGAATATACAAGCACTGACTTATTTTCCATCCATGTGGCATAGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAATATACAAGCACTGACTTATTTTCCATCCATGTGGCATAGGTA  350

seq1  CTAGGGTCTCTCTAAAGTTTCAGTAAATAAATAACAAAGACTGTTCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGTCTCTCTAAAGTTTCAGTAAATAAATAACAAAGACTGTTCATCT  400

seq1  CTTTTGTGTTGGTTTTCTTTTATTCAGCATGTTTTTGAACTCTGGTTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTGTTGGTTTTCTTTTATTCAGCATGTTTTTGAACTCTGGTTAGA  450

seq1  GAGTTGTATATATTGGTCTTTTATTTCCCGTTACTGTCAAACAGTATCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTATATATTGGTCTTTTATTTCCCGTTACTGTCAAACAGTATCTA  500

seq1  TTGTGTAGCTATGGTACCATTTGATTTGTTCATTGATCTGATGCTATTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTAGCTATGGTACCATTTGATTTGTTCATTGATCTGATGCTATTCC  550

seq1  AAATATATTCTGAGTGTTTGAGCACATCTCTCTCCTTTGACATATATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATTCTGAGTGTTTGAGCACATCTCTCTCCTTTGACATATATTTT  600

seq1  TATATTTTCCAAGGTATACTTAAAGATCTAATTGCTTATTCATACAGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTCCAAGGTATACTTAAAGATCTAATTGCTTATTCATACAGTCA  650

seq1  GTGAGTGTTTACCTTTTTAGAAACTACCAATCTATTTTCCAAAAAGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGTTTACCTTTTTAGAAACTACCAATCTATTTTCCAAAAAGAAAT  700