BAC Information

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BAC

Clone NameB6Ng01-037P20
Chromosome16 (Build37)
Map Location 57,782,017 - 57,916,615
singlet/doubletdoublet
Overlap geneLOC629342
Upstream geneGpr128, Tmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480
Downstream geneLOC100043477, Dcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037P20.bB6Ng01-037P20.g
ACCDH865691DH865692
length1,028800
definitionDH865691|Mus musculus domesticus DNA, BAC clone: B6Ng01-037P20, 5' end.DH865692|Mus musculus domesticus DNA, BAC clone: B6Ng01-037P20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,915,575 - 57,916,615)(57,782,017 - 57,782,830)
sequence
gaattcacattcaaactgttcctgtctgtgcctctccaccatggttggaa
acacacagcaaggcttttgtaccataaagtaagaaatatgtttagtcagt
gagagagaatacaatttttaatattttctaagtgaaatacattcaaataa
gatgagcctgaccaaataacgccatcttttgttttaataagaatataaaa
ctgaacatgattcagtaacgtatgctaaatttctactttactaattaaca
gcaatacttcactggcaatggctgagccattctgacacactttattacac
atgattctttacaggtgagggaaaaagaacagtatcatgggggattgttc
ttaagaaggagtgaatcattaatatatactattaatatataccatattca
gagttaatgtatttcttaaatggtaacataatcaatgtgtgcattttagc
tatgatgatttgtttaagttttttaaaatggtaataaacttgtaaatgaa
agctatggaaataaaaacccaaatgatgtgcatatcaagatcacaataca
aattgtaaaagcctgggtgatagagtatacttgaggagaccatggaataa
agacattatggcacacaaagccacagaaattattcatagtacctctgcag
cccatttcccttctcagtcactagaaatatactatttccatactctgagg
gggaggggaccaaaccacatacatcacaccttgccaggaaactgctctgt
agagtctcatgtagctttacatgtcagctgcctgtgtgggctgcatgcat
cagcttgctagttttcaaagaggaggctggaccttcctaagcttccgcag
gacttcctggctctgtgggagtctgctgttcctcagaggtcacttcctct
cttttccctgatctactcagggtaaaacattggaataagaaaggttgggg
tttgtgtgcatgaatagggaaagtctgaaaatatgctctcagagaaaaat
gacagctgtctgtcaactgcagcccgcc
gaattctaagtgccaacattttcattagtgaaaaaagcaaatttgctggc
cagttctgcttctgcctttggggtattcaagaattgtgtgccaggcctga
atgaaaggaaaaaagtttgtctgggaaggttgtgttttcaggaacttggt
tgtcttgagtgctgggctctttttattcaggggtaataagggctgtataa
atcttaaggagtaggtagggcttttcgaggtgagcgtacattattggctg
gggctgacatgctgggaatgcttcatttatgtaaagaggaatttcaagtg
cttgctggagatgtcctaatagggagaaaggaagttaaacctgtaatttg
gccaccagcgtatgtgattacctcaagggtgttggaggtaggggtggcaa
ggatacattcaccagaacatgcaggcctagaacaggatggagcaactctt
attcctgctggtctcaagatgagatgttctgggtttgaacgtgtattgac
ctcactcttgcttcagcatcgttcccctggtcacacagctcactggcccc
acataagttcactatcattataattatatacctcagtaaatattagcaaa
tttgtccagtctgttactttgtcattaaggagagacaagatggagacaga
gaaatacctatgtttatggtttgtaataaatacttccttgtgttgagttt
acaaaatttatttggaagtttggagctgtcaacaactcgttgtatgatgt
ctattttctatgcaatgggctcacttcctacagcactaggagttatgctt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_57915575_57916615
seq2: B6Ng01-037P20.b_46_1073 (reverse)

seq1  GGCGGGCTGCAGTTGGAACAGACAGGCTGTTCATTTTCTCCTGAGAGCAT  50
      |||||||||||||||  ||||||| |||| |||||||   ||||||||||
seq2  GGCGGGCTGCAGTTG--ACAGACA-GCTG-TCATTTTTCTCTGAGAGCAT  46

seq1  ATTTTCAAGAACTTTCCCTATTCCATGCACACAAACCCCAACCTCTCCTT  100
      |||||||   |||||||||||| ||||||||||||||||||||| | |||
seq2  ATTTTCA--GACTTTCCCTATT-CATGCACACAAACCCCAACCT-TTCTT  92

seq1  ATTCCAATGTTTTACCCCTGAGTAGATCAGGGAAAAAGAGAGGAAGTGAC  150
      |||||||||||||| ||||||||||||||||| |||||||||||||||||
seq2  ATTCCAATGTTTTA-CCCTGAGTAGATCAGGG-AAAAGAGAGGAAGTGAC  140

seq1  CTCCTGAGGAACAGCAGACTCCCCACAGAGCCAGGAAGTCCTGCGGAAGC  200
      || ||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CT-CTGAGGAACAGCAGACT-CCCACAGAGCCAGGAAGTCCTGCGGAAGC  188

seq1  TTAGGAAGGTCCAGCCTCCTCTTTGAAAACTAGCAAGCCTGATGCATGCA  250
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTAGGAAGGTCCAGCCTCCTCTTTGAAAACTAGCAAG-CTGATGCATGCA  237

seq1  GCCCACACAGGCAGCTGACATGTAAAGCTACATGAGACTCTACAGAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACACAGGCAGCTGACATGTAAAGCTACATGAGACTCTACAGAGCAG  287

seq1  TTTCCTGGCAAGGTGTGATGTATGTGGTTTGGTCCCCTCCCCCTCAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGGCAAGGTGTGATGTATGTGGTTTGGTCCCCTCCCCCTCAGAGT  337

seq1  ATGGAAATAGTATATTTCTAGTGACTGAGAAGGGAAATGGGCTGCAGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAATAGTATATTTCTAGTGACTGAGAAGGGAAATGGGCTGCAGAGG  387

seq1  TACTATGAATAATTTCTGTGGCTTTGTGTGCCATAATGTCTTTATTCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGAATAATTTCTGTGGCTTTGTGTGCCATAATGTCTTTATTCCAT  437

seq1  GGTCTCCTCAAGTATACTCTATCACCCAGGCTTTTACAATTTGTATTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCCTCAAGTATACTCTATCACCCAGGCTTTTACAATTTGTATTGTG  487

seq1  ATCTTGATATGCACATCATTTGGGTTTTTATTTCCATAGCTTTCATTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGATATGCACATCATTTGGGTTTTTATTTCCATAGCTTTCATTTAC  537

seq1  AAGTTTATTACCATTTTAAAAAACTTAAACAAATCATCATAGCTAAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTATTACCATTTTAAAAAACTTAAACAAATCATCATAGCTAAAATG  587

seq1  CACACATTGATTATGTTACCATTTAAGAAATACATTAACTCTGAATATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATTGATTATGTTACCATTTAAGAAATACATTAACTCTGAATATGG  637

seq1  TATATATTAATAGTATATATTAATGATTCACTCCTTCTTAAGAACAATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTAATAGTATATATTAATGATTCACTCCTTCTTAAGAACAATCC  687

seq1  CCCATGATACTGTTCTTTTTCCCTCACCTGTAAAGAATCATGTGTAATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGATACTGTTCTTTTTCCCTCACCTGTAAAGAATCATGTGTAATAA  737

seq1  AGTGTGTCAGAATGGCTCAGCCATTGCCAGTGAAGTATTGCTGTTAATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTCAGAATGGCTCAGCCATTGCCAGTGAAGTATTGCTGTTAATTA  787

seq1  GTAAAGTAGAAATTTAGCATACGTTACTGAATCATGTTCAGTTTTATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGTAGAAATTTAGCATACGTTACTGAATCATGTTCAGTTTTATATT  837

seq1  CTTATTAAAACAAAAGATGGCGTTATTTGGTCAGGCTCATCTTATTTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTAAAACAAAAGATGGCGTTATTTGGTCAGGCTCATCTTATTTGAA  887

seq1  TGTATTTCACTTAGAAAATATTAAAAATTGTATTCTCTCTCACTGACTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTCACTTAGAAAATATTAAAAATTGTATTCTCTCTCACTGACTAA  937

seq1  ACATATTTCTTACTTTATGGTACAAAAGCCTTGCTGTGTGTTTCCAACCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTCTTACTTTATGGTACAAAAGCCTTGCTGTGTGTTTCCAACCA  987

seq1  TGGTGGAGAGGCACAGACAGGAACAGTTTGAATGTGAATTC  1041
      |||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAGAGGCACAGACAGGAACAGTTTGAATGTGAATTC  1028

seq1: chr16_57782017_57782830
seq2: B6Ng01-037P20.g_69_868

seq1  GAATTCTAAGTGCCAACATTTTCATTAGTGAAAAAAGCAAATTTGCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGTGCCAACATTTTCATTAGTGAAAAAAGCAAATTTGCTGGC  50

seq1  CAGTTCTGCTTCTGCCTTTGGGGTATTCAAGAATTGTGTGCCAGGCCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTGCTTCTGCCTTTGGGGTATTCAAGAATTGTGTGCCAGGCCTGA  100

seq1  ATGAAAGGAAAAAAGTTTGTCTGGGAAGGTTGTGTTTTCAGGAACTTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGGAAAAAAGTTTGTCTGGGAAGGTTGTGTTTTCAGGAACTTGGT  150

seq1  TGTCTTGAGTGCTGGGCTCTTTTTATTCAGGGGTAATAAGGGCTGTATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGAGTGCTGGGCTCTTTTTATTCAGGGGTAATAAGGGCTGTATAA  200

seq1  ATCTTAAGGAGTAGGTAGGGCTTTTCGAGGTGAGCGTACATTATTGGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAGGAGTAGGTAGGGCTTTTCGAGGTGAGCGTACATTATTGGCTG  250

seq1  GGGCTGACATGCTGGGAATGCTTCATTTATGTAAAGAGGAATTTCAAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGACATGCTGGGAATGCTTCATTTATGTAAAGAGGAATTTCAAGTG  300

seq1  CTTGCTGGAGATGTCCTAATAGGGAGAAAGGAAGTTAAACCTGTAATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGGAGATGTCCTAATAGGGAGAAAGGAAGTTAAACCTGTAATTTG  350

seq1  GCCACCAGCGTATGTGATTACCTCAAGGGTGTTGGAGGTAGGGGTGGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCAGCGTATGTGATTACCTCAAGGGTGTTGGAGGTAGGGGTGGCAA  400

seq1  GGATACATTCACCAGAACATGCAGGCCTAGAACAGGATGGAGCAACTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACATTCACCAGAACATGCAGGCCTAGAACAGGATGGAGCAACTCTT  450

seq1  ATTCCTGCTGGTCTCAAGATGAGATGTTCTGGGTTTGAACGTGTATTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGCTGGTCTCAAGATGAGATGTTCTGGGTTTGAACGTGTATTGAC  500

seq1  CTCACTCTTGCTTCAGCATCGTTCCCCTGGTCACACAGCTCACTGGCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCTTGCTTCAGCATCGTTCCCCTGGTCACACAGCTCACTGGCCCC  550

seq1  ACATAAGTTCACTATCATTATAATTATATACCTCAGTAAATATTAGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGTTCACTATCATTATAATTATATACCTCAGTAAATATTAGCAAA  600

seq1  TTTGTCCAGTCTGTTACTTTGTCATTAAAGAGAGACAAGAATGGAGACAG  650
      |||||||||||||||||||||||||||| |||||||||| ||||||||||
seq2  TTTGTCCAGTCTGTTACTTTGTCATTAAGGAGAGACAAG-ATGGAGACAG  649

seq1  AGAAATACCTATGTTTATGGTTTTGTAATATATACTTCCTTGTGTTGAGT  700
      |||||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  AGAAATACCTATGTTTATGG-TTTGTAATAAATACTTCCTTGTGTTGAGT  698

seq1  ATTACAAAATATATTTGGAAGTTTTGGAGCATGTCAAACCAACTCCGTTG  750
       ||||||||| |||||||||| |||||||| ||||||  ||||| |||||
seq2  -TTACAAAATTTATTTGGAAG-TTTGGAGC-TGTCAA--CAACT-CGTTG  742

seq1  TATGATGTCTATTTTATCTATGCAATTGTGCTTCACTTTCCCTACAGCAC  800
      ||||||||||||||  ||||||||| || || ||||||  ||||||||||
seq2  TATGATGTCTATTT--TCTATGCAA-TGGGC-TCACTT--CCTACAGCAC  786

seq1  TAGGAGTTATGCTT  814
      ||||||||||||||
seq2  TAGGAGTTATGCTT  800