BAC Information

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BAC

Clone NameB6Ng01-038P02
Chromosome16 (Build37)
Map Location 77,383,602 - 77,491,531
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039316, 1700063K16Rik, LOC665120, Usp25
Downstream gene2810055G20Rik, LOC435483, LOC100039561, Cxadr, Btg3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038P02.bB6Ng01-038P02.g
ACCDH866356DH866357
length789409
definitionDH866356|Mus musculus domesticus DNA, BAC clone: B6Ng01-038P02, 5' end.DH866357|Mus musculus domesticus DNA, BAC clone: B6Ng01-038P02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,490,775 - 77,491,531)(77,383,602 - 77,384,016)
sequence
attgtggctataaggtgggagagggatcctgcggaattcagtgaaaaaga
caaattagacattagttgctgaagacaccacccaagtctgttttaacaca
ttctttgtgaaaataaaatagaatgttgaagttgaaaagcactaagtatc
ttcctcactggctgtagaggtaatgaatagagtcagatccttgcaggtaa
gcacacacataaaaataaataaataaactctttaaaaaacacaaatcttt
ttaaaaatactagaaacatcagaaattagcattcatacaacaaggatgaa
tacgagcaggacaatttaaactagcaggtgttccatgaaatatatacttt
gtaatacgctagtagcctgtattttaatggcattttaatatttttttaaa
tgactaatctagtccacattttagagaggaaaccaaacaatcttgaatag
ttcttcttcttctgagtaatgtgtctagtcttaaaggagtcacaaggtag
aaattttgtaactaataccatttggaatattaataaaaataaatccacta
aaactgggtaattctttctgaatttttgctctcatcacattcacattaaa
cctgcaaaggcctgctagataaataacattttttgtgtgatcagtatcct
tgacaaactcactggccatcgccagtgcttttggaataaaaaataagcca
catagggcatatatgtcacagctcttggttatgatctgtggtaacttcat
gggcagaaggccttctggggatgcttgtctgggatgtct
tctgaactggtgtgagcgtgcctgctttgtatggacaggccagatatcag
ctccttcgagggtagttacttaacctctaagctaacaggactcctgctgc
agtgtgttctgtccttcataaaccagagagtcaagtacaggagcttggaa
ggctggcagtgagcaagaggacaaccagcttccttcctgagtgatcagag
tatcaaagtgctcataactgaatttagtaggttgtgtcagaaaggagttt
ttcaagaagcaataagtaatttcttaaccagatactggcttttggcacta
ttttaaaaagaaaatatatttttcaagatatttgcttttagatgaccttt
aatagtcttcatatcttttataggaagagacgcccacccctaaaaaaatt
tcactacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_77490775_77491531
seq2: B6Ng01-038P02.b_34_789 (reverse)

seq1  AGACAATCCCAGACAAGCATGCCCAAGAAGGCCTTCTGCCCATGAAGTTA  50
      |||| ||||||||||||||| ||| |||||||||||||||||||||||||
seq2  AGAC-ATCCCAGACAAGCAT-CCCCAGAAGGCCTTCTGCCCATGAAGTTA  48

seq1  ACACAGATCATTAACCAGGA-CTGTGACATATATGCCCTATGTGGCTTAT  99
       ||||||||| |||||| || |||||||||||||||||||||||||||||
seq2  CCACAGATCA-TAACCAAGAGCTGTGACATATATGCCCTATGTGGCTTAT  97

seq1  TTTTTATTCC-AAAGCACTGGCGATGGCAAGTGAGTTTGTCAAGGATACT  148
      |||||||||| ||||||||||||||||| |||||||||||||||||||||
seq2  TTTTTATTCCAAAAGCACTGGCGATGGCCAGTGAGTTTGTCAAGGATACT  147

seq1  GATCACACAAAAAATGTTATTTATCTAGCAGGCCTTTGCAGGTTTAATGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACACAAAAAATGTTATTTATCTAGCAGGCCTTTGCAGGTTTAATGT  197

seq1  GAATGTGATGAGAGCAAAAATTCAGAAAGAATTACCCAGTTTTAGTGGAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGATGAGAGCAAAAATTCAGAAAGAATTACCCAGTTTTAGTGGAT  247

seq1  TTATTTTTATTAATATTCCAAATGGTATTAGTTACAAAATTTCTACCTTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTATTAATATTCCAAATGGTATTAGTTACAAAATTTCTACCTTG  297

seq1  TGACTCCTTTAAGACTAGACACATTACTCAGAAGAAGAAGAACTATTCAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCTTTAAGACTAGACACATTACTCAGAAGAAGAAGAACTATTCAA  347

seq1  GATTGTTTGGTTTCCTCTCTAAAATGTGGACTAGATTAGTCATTTAAAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTTGGTTTCCTCTCTAAAATGTGGACTAGATTAGTCATTTAAAAA  397

seq1  AATATTAAAATGCCATTAAAATACAGGCTACTAGCGTATTACAAAGTATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAAAATGCCATTAAAATACAGGCTACTAGCGTATTACAAAGTATA  447

seq1  TATTTCATGGAACACCTGCTAGTTTAAATTGTCCTGCTCGTATTCATCCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATGGAACACCTGCTAGTTTAAATTGTCCTGCTCGTATTCATCCT  497

seq1  TGTTGTATGAATGCTAATTTCTGATGTTTCTAGTATTTTTAAAAAGATTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTATGAATGCTAATTTCTGATGTTTCTAGTATTTTTAAAAAGATTT  547

seq1  GTGTTTTTTAAAGAGTTTATTTATTTATTTTTATGTGTGTGCTTACCTGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTTTAAAGAGTTTATTTATTTATTTTTATGTGTGTGCTTACCTGC  597

seq1  AAGGATCTGACTCTATTCATTACCTCTACAGCCAGTGAGGAAGATACTTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATCTGACTCTATTCATTACCTCTACAGCCAGTGAGGAAGATACTTA  647

seq1  GTGCTTTTCAACTTCAACATTCTATTTTATTTTCACAAAGAATGTGTTAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTTCAACTTCAACATTCTATTTTATTTTCACAAAGAATGTGTTAA  697

seq1  AACAGACTTGGGTGGTGTCTTCAGCAACTAATGTCTAATTTGTCTTTTTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACTTGGGTGGTGTCTTCAGCAACTAATGTCTAATTTGTCTTTTTC  747

seq1  ACTGAATTC  757
      |||||||||
seq2  ACTGAATTC  756

seq1: chr16_77383602_77384016
seq2: B6Ng01-038P02.g_68_482

seq1  GAATTCTCTGAACTGGTGTGAGCGTGCCTGCTTTGTATGGACAGGCCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGAACTGGTGTGAGCGTGCCTGCTTTGTATGGACAGGCCAGA  50

seq1  TATCAGCTCCTTCGAGGGTAGTTACTTAACCTCTAAGCTAACAGGACTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCTCCTTCGAGGGTAGTTACTTAACCTCTAAGCTAACAGGACTCC  100

seq1  TGCTGCAGTGTGTTCTGTCCTTCATAAACCAGAGAGTCAAGTACAGGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCAGTGTGTTCTGTCCTTCATAAACCAGAGAGTCAAGTACAGGAGC  150

seq1  TTGGAAGGCTGGCAGTGAGCAAGAGGACAACCAGCTTCCTTCCTGAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGGCTGGCAGTGAGCAAGAGGACAACCAGCTTCCTTCCTGAGTGA  200

seq1  TCAGAGTATCAAAGTGCTCATAACTGAATTTAGTAGGTTGTGTCAGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTATCAAAGTGCTCATAACTGAATTTAGTAGGTTGTGTCAGAAAG  250

seq1  GAGTTTTTCAAGAAGCAATAAGTAATTTCTTAACCAGATACTGGCTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTTCAAGAAGCAATAAGTAATTTCTTAACCAGATACTGGCTTTTG  300

seq1  GCACTATTTTAAAAAGAAAATATATTTTTCAAGATATTTGCTTTTAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTATTTTAAAAAGAAAATATATTTTTCAAGATATTTGCTTTTAGATG  350

seq1  ACCTTTAATAGTCTTCATAGCTTTTATAGGAAGAGACGCCCACCCCTAAA  400
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACCTTTAATAGTCTTCATATCTTTTATAGGAAGAGACGCCCACCCCTAAA  400

seq1  AAAATTTCACTACAG  415
      |||||||||||||||
seq2  AAAATTTCACTACAG  415