BAC Information

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BAC

Clone NameB6Ng01-040J09
Chromosome16 (Build37)
Map Location 71,504,196 - 71,504,954
singlet/doubletsinglet
Overlap genenone
Upstream geneGbe1, D16Ertd519e, LOC100039231
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040J09.bB6Ng01-040J09.g
ACCDH867503DH867504
length1,071917
definitionDH867503|Mus musculus domesticus DNA, BAC clone: B6Ng01-040J09, 5' end.DH867504|Mus musculus domesticus DNA, BAC clone: B6Ng01-040J09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccattttttaatgaggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatccgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttatctcccatgctcatggattggcaggatcaacattgtaaaaatggcta
tcttgccaaaagctatctacagattccatgcaatccccatcaaaattcca
actcaattcttcaacgaattagaaagggcaatcggcagattcatctggaa
taacaaaaaacctaggatagcaaaaactcttctcaaggataaaagaacct
ctggtggaatcaccatgccggacctaaaactgtactacagagcaattgtg
atcaaaactgcatggtactggtatagagacagacaagtagaccaatggaa
cagaattgaagacccagagatgaacccacacacctatggtcacttgatct
ttgacaagggagctaaaaccatccagtggaaaaaaagacagcattttcaa
caaatggtgctggcacaactggcggttatcatgtagaagaatgcgaattg
atccatttctatttccttgtactaaggtcaaatctaaggggattaaggaa
cttcacataaaaccagagacactgaaacttatagaggagaaagtagggaa
aagcttcgaagatatgggtacaggggaaaaatttctgaatagaacagcaa
tggcttgtgctgtaagatcaggaatcgataaatgggacctcataaaattg
caaagcttctctttacctcttatgtgaaagcagaatcacaaaatgtcctg
aatgacttccctgttaagggccagctccctgggcacaggaatccttatta
cagacacacagtgcaaccttcagatgctgtccgtaacaaatatgctttat
actgccctgcatgaaagtatttgtagcttagagggtttgttttattttta
cacacctttttaaatttccaggaactaatccattatcggaaggacttttc
tttctatcttcttctttcttt
gaattcttttggaagacttgggtgaagtaatctaggcccatgaaggaatt
agaaactccagaggaagaccagcagacctgaaaaaaaaactaaaactaga
aagtttgtgtgatgtcatgtaaaatggtaacctggatctctgagagcttt
gagagatcgagccaccagccaaagagtacacagggttggaccaaggctcc
tggcacatatgcagcagaaacgtaactcagtctccaggtctgatttgcct
ggcctcagtgggagactatgtgtctcatcctgaagagaaatgaggtgcca
ggattgggagacattgagaaggtgcctaacacactcagagggaaaaggga
gggtcagagactctatgagggagaggtgggagaaggaagcatttgtacgt
aaaattaattaactaatttattaatagaaaggtaaataaaatgcaaaaaa
ggattattatcatcctatgctacattcctaagaaatttattcagaggaca
atcctctgagaggttctccagcagccgactgagacaaatgcaggtactta
gagccaaccattagattgagattaggaacccctatggaagagcttgagga
aagactgaaggaactgaggaagattacaaccccatagacacatcagtgtt
aactagctgtgaccccctcagaccaaccagagactaaaccaccaacaaag
gaccatatatgggctggtcagtgcccttgagcacatagatagaagaggag
tggcttgtctggtctcagtgggagggaagtcatctaaacctctgaaagca
tgatgcaccagggaagtgggatcctggtagaaatgaggtggaggtgagag
ggctagtgctgaatcaccctctctgaagcagaggtgtggtagcgggggga
tagtatgatgaatttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_71504196_71504954
seq2: B6Ng01-040J09.b_359_1116

seq1  AGGATAGCAAAAACTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGCAAAAACTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCAC  50

seq1  CATGCCGGACCTAAAACTGTACTACAGAGCAATTGTGATCAAAACTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCGGACCTAAAACTGTACTACAGAGCAATTGTGATCAAAACTGCAT  100

seq1  GGTACTGGTATAGAGACAGACAAGTAGACCAATGGAACAGAATTGAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTGGTATAGAGACAGACAAGTAGACCAATGGAACAGAATTGAAGAC  150

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTTGACAAGGGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTTGACAAGGGAGC  200

seq1  TAAAACCATCCAGTGGAAAAAAAGACAGCATTTTCAACAAATGGTGCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAAAAAAGACAGCATTTTCAACAAATGGTGCTGG  250

seq1  CACAACTGGCGGTTATCATGTAGAAGAATGCGAATTGATCCATTTCTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTGGCGGTTATCATGTAGAAGAATGCGAATTGATCCATTTCTATT  300

seq1  TCCTTGTACTAAGGTCAAATCTAAGGGGATTAAGGAACTTCACATAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTACTAAGGTCAAATCTAAGGGGATTAAGGAACTTCACATAAAAC  350

seq1  CAGAGACACTGAAACTTATAGAGGAGAAAGTAGGGAAAAGCTTCGAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACACTGAAACTTATAGAGGAGAAAGTAGGGAAAAGCTTCGAAGAT  400

seq1  ATGGGTACAGGGGAAAAATTTCTGAATAGAACAGCAATGGCTTGTGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTACAGGGGAAAAATTTCTGAATAGAACAGCAATGGCTTGTGCTGT  450

seq1  AAGATCAGGAATCGATAAATGGGACCTCATAAAATTGCAAAGCTTCTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCAGGAATCGATAAATGGGACCTCATAAAATTGCAAAGCTTCTCTT  500

seq1  TACCTCTTATGTGAAAGCAGAATCACAAAATGTCCTGAATGACTTCCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTTATGTGAAAGCAGAATCACAAAATGTCCTGAATGACTTCCCTG  550

seq1  TTAAGGGCCAGCTCCCTGGGCACAGGAATCCTTATTACAGACACACAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGCCAGCTCCCTGGGCACAGGAATCCTTATTACAGACACACAGTG  600

seq1  CAACCTTCAGATGCTGTCCGTAACAAATATGCTTTATACTGCCCTGCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTCAGATGCTGTCCGTAACAAATATGCTTTATACTGCCCTGCATG  650

seq1  AAAGTATTTGTAGCTTAGAGGGTTTTGTTTTATTTTTACACACCTTTTTA  700
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAAGTATTTGTAGCTTAGAGGG-TTTGTTTTATTTTTACACACCTTTTTA  699

seq1  AATTTTTCCAGGAACTAATCCCATTATCTGA--TAGTGTACTTT-TTTCT  747
      ||  ||||||||||||||| |||||||| ||   | | | |||| | |||
seq2  AA--TTTCCAGGAACTAAT-CCATTATCGGAAGGACTTTTCTTTCTATCT  746

seq1  TTTCTTTTCTTT  759
      | |  |||||||
seq2  TCTTCTTTCTTT  758