BAC Information

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BAC

Clone NameB6Ng01-041F03
Chromosome16 (Build37)
Map Location 3,325,041 - 3,325,810
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042177, LOC100042915, LOC100042188, LOC100042251, LOC100042925
Downstream geneLOC100042270, LOC100042937, LOC100042283, Olfr161, Olfr162-ps1, Olfr163-ps1, LOC100042949, Mefv, EG620395, Zfp263, Olfr15, Zfp174, Zfp597, 1200013P24Rik, 1700037C18Rik, Cluap1, LOC664851, Nlrc3, Btbd12, Dnase1, Trap1, Crebbp, EG436332, Adcy9, EG620313
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041F03.bB6Ng01-041F03.g
ACCDH868015DH868016
length790208
definitionDH868015|Mus musculus domesticus DNA, BAC clone: B6Ng01-041F03, 5' end.DH868016|Mus musculus domesticus DNA, BAC clone: B6Ng01-041F03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtgctcctaagacactgaaacactagccttcaaacagggtagc
gaggaccatggctgtgactattaggcatgtgccctgctcacagacataac
tcttttgtcctcctgtatttcacttacaagtttaaagaccattaagaatt
ttaaaataatgacaatggagcccttggagcaagtgttagggatcgtctgc
gtgtaaggccttatgcaacaacataagttacatgccaaggaacccatctc
agcatctggccacaaatgccaatagtgctgaggttgagatgtcctgctcc
ttgagttgtttctcttctagttttggttttgtgcatatccagctggtagt
cattgcccccaaattttctcccggatgagagtcacattttccttgggatt
gtggagaacaaggaaatcttgtgaccctatccagctcatctttaaaaaat
aaaaaggggaattgtacccttcccccagccttaaataggttaagcaaccc
tctaaaggtttaacaacctggctggagttggcacctggcctcatctcatt
tgcattttcccagctgagctttgagtagttgacagcctgctgagcttgcc
atgcaactcaatctagctaaaacaaaggataggtctgtaggttttgtcta
tataaatgcaaagctgaaaattaaactttgtttttgttttttttttgttg
ttgtcgttgttgttttgttttttgtttttgttttttgttttgttttgttt
tgtttttgtttttgttttgttttgtttttttgcaagacag
acagggaaatcatcactcagggacttcaggcagaaaactagccagtcagc
ctctggatagacaaggctcaacagttcagagaaccaggccatcgcaaata
gttcacagacctgcaaggaagacatgcagatccctgccccccaccccacc
cctcccccagccccacccaaacatagggagaaaaggcagtgtgggggagg
gggaggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_3325041_3325810
seq2: B6Ng01-041F03.b_42_831

seq1  GAATTCTGTGCTCATAAGACACTGAAACACTAGCCTTCAAACAGGGTAGC  50
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGCTCCTAAGACACTGAAACACTAGCCTTCAAACAGGGTAGC  50

seq1  -AAGACCATGGCCATGACTATCAGGCATGTGCCCTGCTCACAGACATAAC  99
       | |||||||||  ||||||| ||||||||||||||||||||||||||||
seq2  GAGGACCATGGCTGTGACTATTAGGCATGTGCCCTGCTCACAGACATAAC  100

seq1  TCTTTTGTCCTCCTGTATTTCACTTACAAGATTAAAGACCATTAAGAATT  149
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCTTTTGTCCTCCTGTATTTCACTTACAAGTTTAAAGACCATTAAGAATT  150

seq1  TTAAAATAATGACAATGAAGCCCTTGGAGCAAGTGTTAGGGATCCTCTGG  199
      ||||||||||||||||| |||||||||||||||||||||||||| |||| 
seq2  TTAAAATAATGACAATGGAGCCCTTGGAGCAAGTGTTAGGGATCGTCTGC  200

seq1  GTGTAAGGCCTTATGCAACAACATAAGTTACATGCCAAGGAACCCATCTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGGCCTTATGCAACAACATAAGTTACATGCCAAGGAACCCATCTC  250

seq1  AGCATCTGGCCACAAATGCCAATAGTGCTGAGGTTGAGATGTCCTGCTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTGGCCACAAATGCCAATAGTGCTGAGGTTGAGATGTCCTGCTCC  300

seq1  TTGAGTTGTTTCTCTTCTAGTTTTGGTTTTGTGCATAGCCAGCTGGTAGT  349
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTGAGTTGTTTCTCTTCTAGTTTTGGTTTTGTGCATATCCAGCTGGTAGT  350

seq1  CATTGCCCCCAAATTTTCTACTGGATGAGAGTCACATTTTCCTAGGGATT  399
      ||||||||||||||||||| | ||||||||||||||||||||| ||||||
seq2  CATTGCCCCCAAATTTTCTCCCGGATGAGAGTCACATTTTCCTTGGGATT  400

seq1  GTGGAGAACAAGTAAATCTTGTAACCCCATCCAGCTCATCTTTAAAAAAT  449
      |||||||||||| ||||||||| |||| ||||||||||||||||||||||
seq2  GTGGAGAACAAGGAAATCTTGTGACCCTATCCAGCTCATCTTTAAAAAAT  450

seq1  AAAAAGGGGAATTGTACCCTTCCCCCAGCCTTGAATAGGTTAAACAACCC  499
      |||||||||||||||||||||||||||||||| |||||||||| ||||||
seq2  AAAAAGGGGAATTGTACCCTTCCCCCAGCCTTAAATAGGTTAAGCAACCC  500

seq1  TCCAAAGGTTTAACAACCTGGCTGGAGTTGGCACCTGGCCTCATCTCATT  549
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGGTTTAACAACCTGGCTGGAGTTGGCACCTGGCCTCATCTCATT  550

seq1  TGCATTTTCCCACCTGAGCTTTGAGTAGTTGACAGCCTGCTGAGCTTGCT  599
      |||||||||||| |||||||||||||||||||||||||||||||||||| 
seq2  TGCATTTTCCCAGCTGAGCTTTGAGTAGTTGACAGCCTGCTGAGCTTGCC  600

seq1  TTGCAACTCAATCCAGCTAAAACAAAGGGTGGGTCTGTAGGTTTTGTCTA  649
       |||||||||||| |||||||||||||| | |||||||||||||||||||
seq2  ATGCAACTCAATCTAGCTAAAACAAAGGATAGGTCTGTAGGTTTTGTCTA  650

seq1  TATAAATGCAAAGCTGAAAATTAAACTTTGTTTTTGTTTTT---------  690
      |||||||||||||||||||||||||||||||||||||||||         
seq2  TATAAATGCAAAGCTGAAAATTAAACTTTGTTTTTGTTTTTTTTTTGTTG  700

seq1  -----GTTTTTGTTTTTTTAATTTTATTTATTTATTTATTTGTTT--ATT  733
           ||| ||||||| ||  || | ||| ||| ||  |||||||   ||
seq2  TTGTCGTTGTTGTTTTGTTTTTTGTTTTTGTTTTTTGTTTTGTTTTGTTT  750

seq1  TG--TTTGTTTGTTTGTTGTTGT-TGTTTTTGCAAGACAG  770
      ||  ||||||| | | ||||| | | ||||||||||||||
seq2  TGTTTTTGTTTTTGTTTTGTTTTGTTTTTTTGCAAGACAG  790