BAC Information

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BAC

Clone NameB6Ng01-041K19
Chromosome16 (Build37)
Map Location 80,237,483 - 80,238,218
singlet/doubletsinglet
Overlap genenone
Upstream geneEG383172, 1700066C05Rik
Downstream geneLOC621365, LOC100039724, Ncam2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041K19.bB6Ng01-041K19.g
ACCDH868269DH868270
length823736
definitionDH868269|Mus musculus domesticus DNA, BAC clone: B6Ng01-041K19, 5' end.DH868270|Mus musculus domesticus DNA, BAC clone: B6Ng01-041K19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggaataccaaatggctgataagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaacctgagattccat
ctcacaccagtcagaacggttaagatcaaaaattcaggtgacagcagatg
ctggcaaggatgtggagaaagagaaacactcctccattgttggtgggatt
gcaagcttgtacaaccactctggaaatcagtctggcggttcctcagaaaa
ttggacatagtactactggaggatcccgcaatacctctcctgggcatata
tccagaagaggtcccaaccggtaagaaggacacatgctcactatgttcat
agcagccttatttataatagccagaagctggaaagaacacagatgcccat
caacagaggaatggatataaaaaatgtggtacatttaaacaatggagtac
tactcagctattaaaaagaatgaatttatgaaattcctaagcaaatggtt
ggccctggagggcatcatcctgagtgaggtaacacaatcacaaaagaact
caaatgatatgtactcactgataagtggatattagcccagaaacttagta
tagtgagatataaggtacaatttgcaaaacacatgaaactgaagaagaac
aaagaccaaagtgtggacactttgccccttcttaagttggaaacaatctc
ccatggaaaggagttacagagacaaagtttgggagctgagacaaaaagga
tgtaccattctagagactgccatatccagggatccacggaccttgcaagc
gtttgatgcaaggtctgtgatat
gaattcaaaacagattgaaattccacaatgcattcacattctactgtgtt
acttcaaacttcagccaactattgaacattaatactttcacgtttctcca
cttcatcctttgactcatctggggagacgataatctgtttacaaatttgg
atcctttgtgaatatttagaattgccagtgcatgaagaaaagaaaaagtg
aaaatacaatttcatttgcaagcatgctttttttaaacaatccataaata
atgtgaaggatagttaatctcatttttcaaataattgaataagtacaatt
aatttccatgctatttcagtagtcttcttaattaaatatttaggattttc
tgtaaaatcagcttttgaaaatcaattcaaatgtaatttgcatgttgtaa
taaataaaagcagatttagcactttgaatgtttgtagatgaatggtatca
aacttctatttcttcctcttaaagaaagaacagcattgcaatatagttgg
gctttataaaaagttatttttaatgatttctcaaatgctttaattgtaga
caaaatagaatttatcttattccatgatgttttatctcttgcttatccta
aattgagtatttttagtactaaaaaatatctgattcaatatgacatttag
cattctagaatgttatatgagaaaatatgcatactgtcttttgtgttaaa
tatttcaatacagtgagattttatttctgtatatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_80237483_80238218
seq2: B6Ng01-041K19.g_68_803

seq1  GAATTCAAAACAGATTGAAATTCCACAATGCATTCACATTCTACTGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAACAGATTGAAATTCCACAATGCATTCACATTCTACTGTGTT  50

seq1  ACTTCAAACTTCAGCCAACTATTGAACATTAATACTTTCACGTTTCTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAACTTCAGCCAACTATTGAACATTAATACTTTCACGTTTCTCCA  100

seq1  CTTCATCCTTTGACTCATCTGGGGAGACGATAATCTGTTTACAAATTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCCTTTGACTCATCTGGGGAGACGATAATCTGTTTACAAATTTGG  150

seq1  ATCCTTTGTGAATATTTAGAATTGCCAGTGCATGAAGAAAAGAAAAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTGTGAATATTTAGAATTGCCAGTGCATGAAGAAAAGAAAAAGTG  200

seq1  AAAATACAATTTCATTTGCAAGCATGCTTTTTTTAAACAATCCATAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACAATTTCATTTGCAAGCATGCTTTTTTTAAACAATCCATAAATA  250

seq1  ATGTGAAGGATAGTTAATCTCATTTTTCAAATAATTGAATAAGTACAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAGGATAGTTAATCTCATTTTTCAAATAATTGAATAAGTACAATT  300

seq1  AATTTCCATGCTATTTCAGTAGTCTTCTTAATTAAATATTTAGGATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCATGCTATTTCAGTAGTCTTCTTAATTAAATATTTAGGATTTTC  350

seq1  TGTAAAATCAGCTTTTGAAAATCAATTCAAATGTAATTTGCATGTTGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAATCAGCTTTTGAAAATCAATTCAAATGTAATTTGCATGTTGTAA  400

seq1  TAAATAAAAGCAGATTTAGCACTTTGAATGTTTGTAGATGAATGGTATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAAGCAGATTTAGCACTTTGAATGTTTGTAGATGAATGGTATCA  450

seq1  AACTTCTATTTCTTCCTCTTAAAGAAAGAACAGCATTGCAATATAGTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTATTTCTTCCTCTTAAAGAAAGAACAGCATTGCAATATAGTTGG  500

seq1  GCTTTATAAAAAGTTATTTTTAATGATTTCTCAAATGCTTTAATTGTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATAAAAAGTTATTTTTAATGATTTCTCAAATGCTTTAATTGTAGA  550

seq1  CAAAATAGAATTTATCTTATTCCATGATGTTTTATCTCTTGCTTATCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAGAATTTATCTTATTCCATGATGTTTTATCTCTTGCTTATCCTA  600

seq1  AATTGAGTA-TTTTAGTACTAAAAAATATCTGATTCAATATGACATTTAG  649
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGTATTTTTAGTACTAAAAAATATCTGATTCAATATGACATTTAG  650

seq1  CATTCTAGAATGTTATATGAGAAAATATGCATACTGTCTTTTGTGTTAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTAGAATGTTATATGAGAAAATATGCATACTGTCTTTTGTGTTAAA  700

seq1  TATTTCAATACAGTGAGATTTTATTTCTGTAATATGT  736
      |||||||||||||||||||||||||||||| ||||||
seq2  TATTTCAATACAGTGAGATTTTATTTCTGT-ATATGT  736