BAC Information

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BAC

Clone NameB6Ng01-041M03
Chromosome16 (Build37)
Map Location 63,212,469 - 63,213,204
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1
Downstream geneEpha3, LOC100043540
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041M03.bB6Ng01-041M03.g
ACCDH868328DH868329
length1,217738
definitionDH868328|Mus musculus domesticus DNA, BAC clone: B6Ng01-041M03, 5' end.DH868329|Mus musculus domesticus DNA, BAC clone: B6Ng01-041M03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatatagtaatgccatccactctgtctgacgacattgcgtttcc
cttgaatcttgctactaagccataactctttcatatttaggccaaaaacc
tagcacagcatgcatgatgccagattctgcttctatttaaagatgcactt
tgaccatcatagctgcagaagtctctgtctttcaaagtggtaaaatgttt
ttgaatagcatgtcctgtaaactcttttctcaagaattctcttccatatg
aagcctttgacttgtgcttagtcaaatggagagctgtaaataaaattcct
tcaactggctttgcatttttgcaccccagagcattaatgggtggaggtgt
gtcttcagagcacattccgttcaggtctgtgcaaagtctgatatttatct
ttaatagcatggctctctttattgtactttatccacacttgtcttgtctg
caacttgaaagcacatattctttccttgacacctgtgcctctttcacttc
tttctgttccattttttggtctgtctgtgtacttactgtaaatccaatga
agcagagctagtaacaaccatatcagtctctatgctagttttcttgaaat
tttctccatcaatgaaattatcccagaacttttgaattcagtcctactct
aatatttagacacaggcagaacatagccaaatcctttgttacactatggc
ctcttttgaatggatggcctctattgaattcccaaatgggttagtgtagt
gttctaaatatatagtctttcttatgaatatagtctttcttatgagggtt
caacttgtggaactcttaccagaatggcccagtaaggtttccttacaaca
ttacaagacttcgattatcaacatcttcagactttcaaagttcaaagtac
acattatcagtttcttttttttattacatatttcctcattacattccaat
gccatcccaaagtccccatactctccccccacttccctaccactcattcc
catttttttttgggcctggtgtcccctgttctgggcaaataacagtttgc
gtgtccaatgtgcctctctttcaagatgccgactaggcactctctttgaa
catatggcactaagcaaatactcggactgtaattcaatagtgtcaccata
gggtcaaccctagtcctgtacttccagctccatggaggccctgaaccata
aaacgtgaatccactct
gaattccactcataatgaatcttagtcccattccaaatgtgtgtgtgtgt
gtgcgcacgtgcacgtgcgcgcgagcacgcgagagcacaagagaaagaga
gagagagagagagagagagagagagagagagagagagagaggaagattgt
ttgttagactgtttattgactctcttttcttttccttgttagattcagga
agagaatgcctgcaaactaggacacaatcctgcacctgaggccaggcact
ggaaactcaaccttagagttttcagtttctgattttaagaaatacatact
ttctgtttatatttcctatagcagcaagaggtgacaaagagcatttacca
tgtgaataagttccccagtgtcttatagggtcctagaaccttggggtctc
tgactgagctacaggattagaggatgatttgctacaagaacaagaggctt
aaaaccatgtacatttagcttttctttgcaaacattgaacaaacttattt
ctaagtttattcagtttcgagtttaatcagtttcaagtaccagttaggga
gaaggcagacagcaaggggagatgggtggatagtgctccctcacacttta
gcttcactagtttgggataaactccccaacttcccactgccactttccac
tacaacatttatctgtttttcttttcttcctgtgatctctctaatatccc
cctttctaattttccttaaaactcatgacctctttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_63212469_63213204
seq2: B6Ng01-041M03.g_70_807

seq1  GAATTCCACTCATAATGAATCTTAGTCCCATTCCAAATGTGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTCATAATGAATCTTAGTCCCATTCCAAATGTGTGTGTGTGT  50

seq1  GTGCGCACGTGCACGTGCGCGCGAGCACGCGAGAGCACAAGAGAAAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGCACGTGCACGTGCGCGCGAGCACGCGAGAGCACAAGAGAAAGAGA  100

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGATTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGATTGT  150

seq1  TTGTTAGACTGTTTATTGACTCTCTTTTCTTTTCCTTGTTAGATTCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGACTGTTTATTGACTCTCTTTTCTTTTCCTTGTTAGATTCAGGA  200

seq1  AGAGAATGCCTGCAAACTAGGACACAATCCTGCACCTGAGGCCAGGCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATGCCTGCAAACTAGGACACAATCCTGCACCTGAGGCCAGGCACT  250

seq1  GGAAACTCAACCTTAGAGTTTTCAGTTTCTGATTTTAAGAAATACATACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTCAACCTTAGAGTTTTCAGTTTCTGATTTTAAGAAATACATACT  300

seq1  TTCTGTTTATATTTCCTATAGCAGCAAGAGGTGACAAAGAGCATTTACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTATATTTCCTATAGCAGCAAGAGGTGACAAAGAGCATTTACCA  350

seq1  TGTGAATAAGTTCCCCAGTGTCTTATAGGGTCCTAGAACCTTGGGGTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATAAGTTCCCCAGTGTCTTATAGGGTCCTAGAACCTTGGGGTCTC  400

seq1  TGACTGAGCTACAGGATTAGAGGATGATTTGCTACAAGAACAAGAGGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAGCTACAGGATTAGAGGATGATTTGCTACAAGAACAAGAGGCTT  450

seq1  AAAACCATGTACATTTAGCTTTTCTTTGCAAACATTGAACAAACTTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCATGTACATTTAGCTTTTCTTTGCAAACATTGAACAAACTTATTT  500

seq1  CTAAGTTTATTCAGTTTCGAGTTTAATCAGTTTCAAGTACCAGTTAGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTTTATTCAGTTTCGAGTTTAATCAGTTTCAAGTACCAGTTAGGGA  550

seq1  GAAGGCAGACAGCAAGGGGAGATGGGTGGATAGTGCTCCCTCACACTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAGACAGCAAGGGGAGATGGGTGGATAGTGCTCCCTCACACTTTA  600

seq1  GCTTCACTAGTTTGGGATAAACTCCCCAACTTCCCACTGCCACTTTCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCACTAGTTTGGGATAAACTCCCCAACTTCCCACTGCCACTTTCCAC  650

seq1  TACAACATTTATCTG-TTTTCTTTTCTTCCTGTGATCTCTCTTATATCCC  699
      ||||||||||||||| |||||||||||||||||||||||||| |||||||
seq2  TACAACATTTATCTGTTTTTCTTTTCTTCCTGTGATCTCTCTAATATCCC  700

seq1  CCTTTCTAATTTTCCTT-AAACTCATGACCTCTTTTTT  736
      ||||||||||||||||| ||||||||||||||||||||
seq2  CCTTTCTAATTTTCCTTAAAACTCATGACCTCTTTTTT  738