BAC Information

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BAC

Clone NameB6Ng01-042D15
Chromosome16 (Build37)
Map Location 8,345,869 - 8,483,378
singlet/doubletdoublet
Overlap gene4930511J11Rik, BC024814
Upstream geneA2bp1
Downstream geneAbat, LOC665207, Tmem186, Pmm2, Carhsp1, EG436336, Usp7, LOC665231, 1810013L24Rik, LOC100043106
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042D15.bB6Ng01-042D15.g
ACCDH868663DH868664
length1,1321,090
definitionDH868663|Mus musculus domesticus DNA, BAC clone: B6Ng01-042D15, 5' end.DH868664|Mus musculus domesticus DNA, BAC clone: B6Ng01-042D15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,345,869 - 8,347,013)(8,482,287 - 8,483,378)
sequence
gaattcttcactcacaaagcaacccagaactcttcctgtcccaggccctg
cagtggatgtggcctgagaagagtccctgtgcccctgtgagagccttgcc
tgtggctgggattgcaaataagccacctattctggcgtattttctagtaa
cttctttggggagggaagaagggacttcagtaacaactaatgtgggatgc
tagcgtggtttgcatgtaagggtcaagtgtgagtcttttggcaacaaatg
tgagcaacccctggtagctggagtgccctccatcagcttcccaccctctg
gcttccataaaaccatcatccaaaatagattcctctctgctggaggctga
agggaggagggaacttttatatagggggtatattcctttcctaccatgga
tataagcgattactataaacctacaggcttagaaccatacatatgaatct
acagccctggagtctggaattggctccagggaaaaattcacttcattgtc
ctcttcagcttctggtggtcaccagcagtctttggctcacattgccttcc
ttcaagccaagttactctcattctatcagctctgtgttctgctcttcctc
tgcctccctttcctactgtgaggaaagccagtgattataatacacctacc
tcgacgcgccaggatgacctcctcacttcagaggtcagcagttccacccg
ctgcctttattcccctctgtgagaacctaacatagtcatgggttcctgga
atcaggatgtggacattcatttggatgattattatactgcctattataga
cgctttggcagaattctccattctgtgtatgtgtgtgttgttactgttga
tttggaatagcatctcaaaaggtagcccaggctagtctccaacttgtaaa
cctcttgcctcagcctccaaggggatagagatgtgctcatgaaatcttca
ctaatatacaggtacctatggcctccttttctaagtcaggaaaagattga
caagtgaactcaaaacttgcctcttacactgctcccccaagaaaatgatg
tttggttggaagtctgctaaaatatgtcgacccttaatgttctggaacag
gcggctctaagctctcgttcctcttcaatgaa

gaattcaattcccagcaaccctcataaccatctataatgagatctggtgc
cctctttctggcgttcaggcatacatgcagggagaacactgtatatataa
taaataaataaatcttgggggaggctgggtagtggtggcgcacgccttta
atcccatacttgggaggcagaggcaagtgaatttctgagttcgaggccag
cctggtctacagggtgagttccagggctgagttcctgacagccagggcta
cacagagaaacccggtcttgaaaaacaaaacaaaacaaaacaaaacaaaa
caaaacaaaataaaattttgggggaaaaaggagaacatataagaggaaaa
agacgataattacaaagactggaaactatagcacacacgcagacatacgc
acacactcatacatgaatggttacaagcacatttcttttgagtccctggg
gcagggacttacttgcttactctctggaactgtatctagcccacagtggg
tgcctacgacattgcatactgttgaatcactctggaaattatgagtaaat
ttcatcttctgcttctcactttcccctaagaacaagcttgtttctgtcat
tagacacaaatgttaagtcagtgtgtgaggcctacgaagagcacaaccta
ggaccccctgagtcatttgctcttccctggagggtgagcagaaaaaggac
accagacactgcatgcccatgatctcctgaccgcagggtgacactgtggt
gactgggtgttgacagccatttagacaaaaaatgggggggggggcagaga
gaacctggtggtgaccttttcatttttacagatggtacaaattcatgggc
ccactactccctgttgtacaggtaaagagttgttacctgtacaataaacg
gtgtgtgccatcgtggctgccacgatgctggcaagccctgtgcctgcccc
aagctccagcacgttgcatccctggaagaggtctcttggaacaggataag
tctgccaggtgtagggcaccccggccatatctgcacgataggacaagaag
caaggttgagttaggctcaggagagaccctctctggggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_8345869_8347013
seq2: B6Ng01-042D15.b_45_1176

seq1  GAATTCTTCACTCACAAAGCAACCCAGAACTCTTCCTGTCCCAGGCCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACTCACAAAGCAACCCAGAACTCTTCCTGTCCCAGGCCCTG  50

seq1  CAGTGGATGTGGCCTGAGAAGAGTCCCTGTGCCCCTGTGAGAGCCTTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGATGTGGCCTGAGAAGAGTCCCTGTGCCCCTGTGAGAGCCTTGCC  100

seq1  TGTGGCTGGGATTGCAAATAAGCCACCTATTCTGGCGTATTTTCTAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTGGGATTGCAAATAAGCCACCTATTCTGGCGTATTTTCTAGTAA  150

seq1  CTTCTTTGGGGAGGGAAGAAGGGACTTCAGTAACAACTAATGTGGGATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGGGGAGGGAAGAAGGGACTTCAGTAACAACTAATGTGGGATGC  200

seq1  TAGCGTGGTTTGCATGTAAGGGTCAAGTGTGAGTCTTTTGGCAACAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGTGGTTTGCATGTAAGGGTCAAGTGTGAGTCTTTTGGCAACAAATG  250

seq1  TGAGCAACCCCTGGTAGCTGGAGTGCCCTCCATCAGCTTCCCACCCTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAACCCCTGGTAGCTGGAGTGCCCTCCATCAGCTTCCCACCCTCTG  300

seq1  GCTTCCATAAAACCATCATCCAAAATAGATTCCTCTCTGCTGGAGGCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCATAAAACCATCATCCAAAATAGATTCCTCTCTGCTGGAGGCTGA  350

seq1  AGGGAGGAGGGAACTTTTATATAGGGGGTATATTCCTTTCCTACCATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGAGGGAACTTTTATATAGGGGGTATATTCCTTTCCTACCATGGA  400

seq1  TATAAGCGATTACTATAAACCTACAGGCTTAGAACCATACATATGAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCGATTACTATAAACCTACAGGCTTAGAACCATACATATGAATCT  450

seq1  ACAGCCCTGGAGTCTGGAATTGGCTCCAGGGAAAAATTCACTTCATTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCCTGGAGTCTGGAATTGGCTCCAGGGAAAAATTCACTTCATTGTC  500

seq1  CTCTTCAGCTTCTGGTGGTCACCAGCAGTCTTTGGCTCACATTGCCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAGCTTCTGGTGGTCACCAGCAGTCTTTGGCTCACATTGCCTTCC  550

seq1  TTCAAGCCAAGTTACTCTCATTCTATCAGCTCTGTGTTCTGCTCTTCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCCAAGTTACTCTCATTCTATCAGCTCTGTGTTCTGCTCTTCCTC  600

seq1  TGCCTCCCTTTCCTACTGTGAGGAAAGCCAGTGATTATAATACACCTACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCCTTTCCTACTGTGAGGAAAGCCAGTGATTATAATACACCTACC  650

seq1  TCGACGCGCCAGGATGACCTCCTCACTTCAGAGGTCAGCAGTTCCACCCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACGCGCCAGGATGACCTCCTCACTTCAGAGGTCAGCAGTTCCACCCG  700

seq1  CTGCCTTTATTCCCCTCTGTGAGAACCTAACATAGTCATGGGTTCCTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTATTCCCCTCTGTGAGAACCTAACATAGTCATGGGTTCCTGGA  750

seq1  ATCAGGATGTGGACATTCATTTGGATGATTATTATACTGCCTATTATAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGATGTGGACATTCATTTGGATGATTATTATACTGCCTATTATAGA  800

seq1  CGCTTTGGCAGAATTCTCCATTCTGTGTATGTGTGTGTTGTTACTGTTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTGGCAGAATTCTCCATTCTGTGTATGTGTGTGTTGTTACTGTTGA  850

seq1  TTTGGAATAGCATCTCAAAAGGTAGCCCAGGCTAGTCTCCAACTTGTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATAGCATCTCAAAAGGTAGCCCAGGCTAGTCTCCAACTTGTAAA  900

seq1  CCTCTTGCCTCAGCCTCCAAGGGGATAAGAGATGTGCTCATGAAATCTTC  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCTCTTGCCTCAGCCTCCAAGGGGAT-AGAGATGTGCTCATGAAATCTTC  949

seq1  ACTAATATACAAGGTACCTATGGCCTCCTTTTTCTAAGGTCAGGGAAAAG  1000
      |||||||||| ||||||||||||||||| |||||||| |||| |||||||
seq2  ACTAATATAC-AGGTACCTATGGCCTCC-TTTTCTAA-GTCA-GGAAAAG  995

seq1  ATTTGACAAGTGAACTCAAAAACTTGCCTCTTACCACTGCTCCCCCAAGA  1050
      | ||||||||||||||| ||||||||||||||| ||||||||||||||||
seq2  A-TTGACAAGTGAACTC-AAAACTTGCCTCTTA-CACTGCTCCCCCAAGA  1042

seq1  AAATGATGTTTGTGTGGATGTCTGCTAAAATACTGTCGACACTCAAATGT  1100
      ||||||||||||  |||| ||||||||||||| ||||||| ||  |||||
seq2  AAATGATGTTTGGTTGGAAGTCTGCTAAAATA-TGTCGACCCT-TAATGT  1090

seq1  GCTTGAGACCAGGCTGGCCTCAAGCTCTCGTCCTCCTTCAATGAA  1145
       ||   || ||||| |||   |||||||||| |  ||||||||||
seq2  TCT--GGAACAGGC-GGCTCTAAGCTCTCGTTCCTCTTCAATGAA  1132


seq1: chr16_8482287_8483378
seq2: B6Ng01-042D15.g_65_1154 (reverse)

seq1  GGCCCCTG-GAGGGTCTCTCCTGAGCCTTGACTCAACCTTTGCTTCTTTG  49
      |||||| | |||||||||||||||||| | |||||||| ||||||| |||
seq2  GGCCCCAGAGAGGGTCTCTCCTGAGCC-TAACTCAACC-TTGCTTC-TTG  47

seq1  TCCTCTCGTGCAGGTGTGG-CGGGGTGCCCTACTCCTGGCAGACTATATC  98
      |||| |||||||| | ||| ||||||||||||| ||||||||||| ||||
seq2  TCCTATCGTGCAGATATGGCCGGGGTGCCCTACACCTGGCAGACT-TATC  96

seq1  CTGTTCCGAAGAGACCTCTTCCAGGGATGCACCGTGCTGGAGCTTGGGGC  148
      ||||||| ||||||||||||||||||||||| ||||||||||||||||||
seq2  CTGTTCC-AAGAGACCTCTTCCAGGGATGCAACGTGCTGGAGCTTGGGGC  145

seq1  AGGCACAGGGCTTGCCAGCATCGTGGCAGCCACGATGGCACACACCGTTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACAGGGCTTGCCAGCATCGTGGCAGCCACGATGGCACACACCGTTT  195

seq1  ATTGTACAGGTAACAACTCTTTACCTGTACAACAGGGAGTAGTGGGCCCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACAGGTAACAACTCTTTACCTGTACAACAGGGAGTAGTGGGCCCA  245

seq1  TG-ATTTGTACCATCTGTAAAAATGAACAAGGTCACCACCAGGTTCTCTC  297
      || |||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGAATTTGTACCATCTGTAAAAATGAA-AAGGTCACCACCAGGTTCTCTC  294

seq1  TG-CCCCCCCCCCATTTTTTGTCTAAATGGCTGTCAACACCCAGTCACCA  346
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCCCCCCCATTTTTTGTCTAAATGGCTGTCAACACCCAGTCACCA  344

seq1  CAGTGTCACCCTGCGGTCAGGAGATCATGGGCATGCAGTGTCTGGTGTCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCACCCTGCGGTCAGGAGATCATGGGCATGCAGTGTCTGGTGTCC  394

seq1  TTTTTCTGCTCACCCTCCAGGGAAGAGCAAATGACTCAGGGGGTCCTAGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGCTCACCCTCCAGGGAAGAGCAAATGACTCAGGGGGTCCTAGG  444

seq1  TTGTGCTCTTCGTAGGCCTCACACACTGACTTAACATTTGTGTCTAATGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTCTTCGTAGGCCTCACACACTGACTTAACATTTGTGTCTAATGA  494

seq1  CAGAAACAAGCTTGTTCTTAGGGGAAAGTGAGAAGCAGAAGATGAAATTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACAAGCTTGTTCTTAGGGGAAAGTGAGAAGCAGAAGATGAAATTT  544

seq1  ACTCATAATTTCCAGAGTGATTCAACAGTATGCAATGTCGTAGGCACCCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATAATTTCCAGAGTGATTCAACAGTATGCAATGTCGTAGGCACCCA  594

seq1  CTGTGGGCTAGATACAGTTCCAGAGAGTAAGCAAGTAAGTCCCTGCCCCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGCTAGATACAGTTCCAGAGAGTAAGCAAGTAAGTCCCTGCCCCA  644

seq1  GGGACTCAAAAGAAATGTGCTTGTAACCATTCATGTATGAGTGTGTGCGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTCAAAAGAAATGTGCTTGTAACCATTCATGTATGAGTGTGTGCGT  694

seq1  ATGTCTGCGTGTGTGCTATAGTTTCCAGTCTTTGTAATTATCGTCTTTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGCGTGTGTGCTATAGTTTCCAGTCTTTGTAATTATCGTCTTTTT  744

seq1  CCTCTTATATGTTCTCCTTTTTCCCCCAAAATTTTATTTTGTTTTGTTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTATATGTTCTCCTTTTTCCCCCAAAATTTTATTTTGTTTTGTTTT  794

seq1  GTTTTGTTTTGTTTTGTTTTGTTTTTCAAGACCGGGTTTCTCTGTGTAGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTGTTTTGTTTTGTTTTTCAAGACCGGGTTTCTCTGTGTAGC  844

seq1  CCTGGCTGTCAGGAACTCAGCCCTGGAACTCACCCTGTAGACCAGGCTGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGTCAGGAACTCAGCCCTGGAACTCACCCTGTAGACCAGGCTGG  894

seq1  CCTCGAACTCAGAAATTCACTTGCCTCTGCCTCCCAAGTATGGGATTAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGAACTCAGAAATTCACTTGCCTCTGCCTCCCAAGTATGGGATTAAA  944

seq1  GGCGTGCGCCACCACTACCCAGCCTCCCCCAAGATTTATTTATTTATTAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGCGCCACCACTACCCAGCCTCCCCCAAGATTTATTTATTTATTAT  994

seq1  ATATACAGTGTTCTCCCTGCATGTATGCCTGAACGCCAGAAAGAGGGCAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAGTGTTCTCCCTGCATGTATGCCTGAACGCCAGAAAGAGGGCAC  1044

seq1  CAGATCTCATTATAGATGGTTATGAGGGTTGCTGGGAATTGAATTC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTCATTATAGATGGTTATGAGGGTTGCTGGGAATTGAATTC  1090


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