BAC Information

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BAC

Clone NameB6Ng01-042D17
Chromosome16 (Build37)
Map Location 34,991,540 - 35,101,480
singlet/doubletdoublet
Overlap geneMylk, Ptplb
Upstream geneKalrn, LOC100043670, Ropn1, Ccdc14
Downstream geneAdcy5, Sec22a, Pdia5, Sema5b, EG546663, Dirc2, Hspbap1, Parp14, LOC667133, LOC100043217, Dtx3l, Parp9, Kpna1, Wdr5b, 2310056P07Rik, Ccdc58
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042D17.bB6Ng01-042D17.g
ACCDH868667DH868668
length1,151915
definitionDH868667|Mus musculus domesticus DNA, BAC clone: B6Ng01-042D17, 5' end.DH868668|Mus musculus domesticus DNA, BAC clone: B6Ng01-042D17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,100,312 - 35,101,480)(34,991,540 - 34,992,451)
sequence
gaattcagagggaacaggagagagggctcagtggttaaaagcactcgttg
ctcttgcagaggaccagggttcaattcctaagcacacatgtggttgctca
cagccactaaaaggtcttctggcctctgcaggcagcgggcatgttcgtgg
atacagatacctgcagaccaaacatgtacatacatgaggcaccatcatcc
ctgtggaaattgtctcagctcaaattcaagaaactgtagccatttacggc
tcaaaattaacctggattaagcttccaggcacaagaatctgcccagaaac
aagtcattttccctgttgccaacctagatcattaggcagggcagtggaga
agaactgtccatagaccacagagaaaaataagccaaagaattctctgaga
acaaagccaaatctaggccaacaagtgcaacaagtgtccccacagacgga
cagccttcatgatggccgtgcaggctggttggaagctgttacttttccct
tcttttcctcctaaatatagtctattaaaaaaaaaacaaaaggctcatat
ccttgaaatgctagacactggattccattcctaattcaatcgctaaactc
aaactgtgtagtaacaactgttttctttttaggaaatgaggtgtcttagc
tccaaagtcagcctggacctttctgctctgtcatcctcaccccacagttc
ctcatgcacaaaatcacaactggataaacagatgtgccatcagccttttg
tctaagtcacaattaaatttcattattgttgttgagaccagagtctcatt
ctggggccagaaattgtggcaattttcctgcctcagccttccaagttctg
ggattataaaagggtgaatcaccatgcctgaattcattcattctttgttt
ttttctttaatgtaagtaagtacaccgtagctatcttcagacacagccga
agagggcatgagtcccattacagatggttgtgagccaccatgtaggtgct
gggaatgactcagtctctggaagacagtcagtgctctaactgctgagcat
ctttcagcctcacatgcctgatctaaatgaaattactggttaaaatatca
aggcaaataaattataagctgaaaaaacaagtaatgttgcttttaagtaa
a
gaattcttctggaaagacaggaagagaagggcaaccttcaaagaagcagg
tctaactggatcttccttgcatggggcacttaactagaacagccctgtca
cctcagaattatctgtaagtggctctaagccaggcgggtgctaagcccag
ggcatgggcacagagaggagctgtgggtgtgggagagaatggttccattt
ctgcagccagggaaccacacctcacagctcagcccttatctccgggtttg
ccctttactggccataggcttttctagaagggtgaggatcaaatttagaa
aaagaacctcatttcccttttctaatttaagtgaaaacatttggaaatga
cttttctgcaaaattgcacacaaattagaccacaaaaatctcactcaaca
tgtccccgggcttaatttcactgagtacagttcagctgtgctgacctgct
gttaagttgcttccttagggaaatcttttccatatttaaactccaattcc
agaaccttggctcccccagaaatagggggctctgtctcagagcagccaag
ggaatgtgcagcaggacagagaggactagagtgggctatccagggggaga
gagcatgaggcacatgtgtccatgccaactccagaaggaaccttgtaaca
actcccctattctgataaaaggtccccaaaacagggaattaacctggtaa
caaatctctcctttgcaggactaagtgggggcacagggtatctaatcata
ccattggtctttgggtaaagttctgaaagaaggcgtgttttcagttcata
ctgaaagcctagttgccaagctatgtatgtgaagtgtagcaattggggtg
agtttgggaggatagcagggcttctgtctgctaactagatgtaaacgctg
ggcgtgggagtggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_35100312_35101480
seq2: B6Ng01-042D17.b_45_1195 (reverse)

seq1  TTTACTTAATAGCAAACATTACATGGTTTTCTCAGCTTATAAATTTTATT  50
      ||||||||| ||| |||||||| | ||||| |||||||||||  |||| |
seq2  TTTACTTAAAAGC-AACATTAC-TTGTTTTTTCAGCTTATAA--TTTA-T  45

seq1  TTGCTTTGATTATTTTTACCAGTAATATTCATTAAGAATCAGGCATGTGA  100
      |||| |||| |||||| ||||||||| |||||| || |||||||||||||
seq2  TTGCCTTGA-TATTTTAACCAGTAAT-TTCATTTAG-ATCAGGCATGTGA  92

seq1  GGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGTTCTTCCAGAGG  150
      |||| || |||| ||||||||||| ||||||||||||| |||||||||| 
seq2  GGCT-GAAAGAT-GCTCAGCAGTT-AGAGCACTGACTG-TCTTCCAGAG-  137

seq1  ACCTGAGTTCAATTCCCAGCACCTACATGGTGGCTCACAACCATCTGTAA  200
        ||||||   |||||||||||||||||||||||||||||||||||||||
seq2  -ACTGAGT--CATTCCCAGCACCTACATGGTGGCTCACAACCATCTGTAA  184

seq1  TGGGACTCAATGCCCTCTTCGGCTGTGTCTGAAGATAGCTACGGTGTACT  250
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTC-ATGCCCTCTTCGGCTGTGTCTGAAGATAGCTACGGTGTACT  233

seq1  TACTTACATTAAAGGAAAAAAACAAAGAATGAATGAATTCAGGCATGGTG  300
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TACTTACATTAAA-GAAAAAAACAAAGAATGAATGAATTCAGGCATGGTG  282

seq1  ATTCACCCTTTTATAATCCCAGAACTTGGAAGGCTGAGGCAGGAAAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACCCTTTTATAATCCCAGAACTTGGAAGGCTGAGGCAGGAAAATTG  332

seq1  CCACAATTTCTGGCCCCAGAATGAGACTCTGGTCTCAACAACAATAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATTTCTGGCCCCAGAATGAGACTCTGGTCTCAACAACAATAATGA  382

seq1  AATTTAATTGTGACTTAGACAAAAGGCTGATGGCACATCTGTTTATCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAATTGTGACTTAGACAAAAGGCTGATGGCACATCTGTTTATCCAG  432

seq1  TTGTGATTTTGTGCATGAGGAACTGTGGGGTGAGGATGACAGAGCAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATTTTGTGCATGAGGAACTGTGGGGTGAGGATGACAGAGCAGAAA  482

seq1  GGTCCAGGCTGACTTTGGAGCTAAGACACCTCATTTCCTAAAAAGAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAGGCTGACTTTGGAGCTAAGACACCTCATTTCCTAAAAAGAAAAC  532

seq1  AGTTGTTACTACACAGTTTGAGTTTAGCGATTGAATTAGGAATGGAATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTACTACACAGTTTGAGTTTAGCGATTGAATTAGGAATGGAATCC  582

seq1  AGTGTCTAGCATTTCAAGGATATGAGCCTTTTGTTTTTTTTTTAATAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTAGCATTTCAAGGATATGAGCCTTTTGTTTTTTTTTTAATAGAC  632

seq1  TATATTTAGGAGGAAAAGAAGGGAAAAGTAACAGCTTCCAACCAGCCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTAGGAGGAAAAGAAGGGAAAAGTAACAGCTTCCAACCAGCCTGC  682

seq1  ACGGCCATCATGAAGGCTGTCCGTCTGTGGGGACACTTGTTGCACTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCCATCATGAAGGCTGTCCGTCTGTGGGGACACTTGTTGCACTTGTT  732

seq1  GGCCTAGATTTGGCTTTGTTCTCAGAGAATTCTTTGGCTTATTTTTCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAGATTTGGCTTTGTTCTCAGAGAATTCTTTGGCTTATTTTTCTCT  782

seq1  GTGGTCTATGGACAGTTCTTCTCCACTGCCCTGCCTAATGATCTAGGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTATGGACAGTTCTTCTCCACTGCCCTGCCTAATGATCTAGGTTG  832

seq1  GCAACAGGGAAAATGACTTGTTTCTGGGCAGATTCTTGTGCCTGGAAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAGGGAAAATGACTTGTTTCTGGGCAGATTCTTGTGCCTGGAAGCT  882

seq1  TAATCCAGGTTAATTTTGAGCCGTAAATGGCTACAGTTTCTTGAATTTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCAGGTTAATTTTGAGCCGTAAATGGCTACAGTTTCTTGAATTTGA  932

seq1  GCTGAGACAATTTCCACAGGGATGATGGTGCCTCATGTATGTACATGTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGACAATTTCCACAGGGATGATGGTGCCTCATGTATGTACATGTTT  982

seq1  GGTCTGCAGGTATCTGTATCCACGAACATGCCCGCTGCCTGCAGAGGCCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGCAGGTATCTGTATCCACGAACATGCCCGCTGCCTGCAGAGGCCA  1032

seq1  GAAGACCTTTTAGTGGCTGTGAGCAACCACATGTGTGCTTAGGAATTGAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCTTTTAGTGGCTGTGAGCAACCACATGTGTGCTTAGGAATTGAA  1082

seq1  CCCTGGTCCTCTGCAAGAGCAACGAGTGCTTTTAACCACTGAGCCCTCTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGTCCTCTGCAAGAGCAACGAGTGCTTTTAACCACTGAGCCCTCTC  1132

seq1  TCCTGTTCCCTCTGAATTC  1169
      |||||||||||||||||||
seq2  TCCTGTTCCCTCTGAATTC  1151

seq1: chr16_34991540_34992451
seq2: B6Ng01-042D17.g_65_979

seq1  GAATTCTTCTGGAAAGACAGGAAGAGAAGGGCAACCTTCAAAGAAGCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGGAAAGACAGGAAGAGAAGGGCAACCTTCAAAGAAGCAGG  50

seq1  TCTAACTGGATCTTCCTTGCATGGGGCACTTAACTAGAACAGCCCTGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTGGATCTTCCTTGCATGGGGCACTTAACTAGAACAGCCCTGTCA  100

seq1  CCTCAGAATTATCTGTAAGTGGCTCTAAGCCAGGCGGGTGCTAAGCCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAATTATCTGTAAGTGGCTCTAAGCCAGGCGGGTGCTAAGCCCAG  150

seq1  GGCATGGGCACAGAGAGGAGCTGTGGGTGTGGGAGAGAATGGTTCCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGGCACAGAGAGGAGCTGTGGGTGTGGGAGAGAATGGTTCCATTT  200

seq1  CTGCAGCCAGGGAACCACACCTCACAGCTCAGCCCTTATCTCCGGGTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCCAGGGAACCACACCTCACAGCTCAGCCCTTATCTCCGGGTTTG  250

seq1  CCCTTTACTGGCCATAGGCTTTTCTAGAAGGGTGAGGATCAAATTTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTACTGGCCATAGGCTTTTCTAGAAGGGTGAGGATCAAATTTAGAA  300

seq1  AAAGAACCTCATTTCCCTTTTCTAATTTAAGTGAAAACATTTGGAAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACCTCATTTCCCTTTTCTAATTTAAGTGAAAACATTTGGAAATGA  350

seq1  CTTTTCTGCAAAATTGCACACAAATTAGACCACAAAAATCTCACTCAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGCAAAATTGCACACAAATTAGACCACAAAAATCTCACTCAACA  400

seq1  TGTCCCCGGGCTTAATTTCACTGAGTACAGTTCAGCTGTGCTGACCTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCGGGCTTAATTTCACTGAGTACAGTTCAGCTGTGCTGACCTGCT  450

seq1  GTTAAGTTGCTTCCTTAGGGAAATCTTTTCCATATTTAAACTCCAATTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGTTGCTTCCTTAGGGAAATCTTTTCCATATTTAAACTCCAATTCC  500

seq1  AGAACCTTGGCTCCCCCAGAAATAGGGGGCTCTGTCTCAGAGCAGCCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTTGGCTCCCCCAGAAATAGGGGGCTCTGTCTCAGAGCAGCCAAG  550

seq1  GGAATGTGCAGCAGGACAGAGAGGACTAGAGTGGGCTATCCAGGGGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTGCAGCAGGACAGAGAGGACTAGAGTGGGCTATCCAGGGGGAGA  600

seq1  GAGCATGAGGCACATGTGTCCATGCCAACTCCAGAAGGAACCTTGTAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGAGGCACATGTGTCCATGCCAACTCCAGAAGGAACCTTGTAACA  650

seq1  ACTCCCCTATTCTGATAAAAGGTCCCCAAAACAGGGAATTAACCTGGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCTATTCTGATAAAAGGTCCCCAAAACAGGGAATTAACCTGGTAA  700

seq1  CAAATCTCTCC-TTGCAGGACTAAGT-GGGGCACA-GGTATCTAATCATA  747
      ||||||||||| |||||||||||||| |||||||| ||||||||||||||
seq2  CAAATCTCTCCTTTGCAGGACTAAGTGGGGGCACAGGGTATCTAATCATA  750

seq1  CCATTGGTCTTTGGGTAAAGTTCTGAAAGAAGGCGTGTTTTCAGTTCATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGGTCTTTGGGTAAAGTTCTGAAAGAAGGCGTGTTTTCAGTTCATA  800

seq1  CTGAAAGCCTAG-TGCCAAGCTATGTATGTGAAGTGTAGCAATTGGGGTG  846
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGCCTAGTTGCCAAGCTATGTATGTGAAGTGTAGCAATTGGGGTG  850

seq1  AGTTTGGGAGGATAGCAGGGCTTCTGTCTGCTAACTAGATGTAAAAGGCT  896
      |||||||||||||||||||||||||||||||||||||||||| ||| |||
seq2  AGTTTGGGAGGATAGCAGGGCTTCTGTCTGCTAACTAGATGT-AAACGCT  899

seq1  GGGCGTGGGAGTGGGA  912
      ||||||||||||||||
seq2  GGGCGTGGGAGTGGGA  915