BAC Information

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BAC

Clone NameB6Ng01-043P21
Chromosome16 (Build37)
Map Location 42,451,705 - 42,452,822
singlet/doubletsinglet
Overlap genenone
Upstream geneLsamp, Gap43
Downstream geneBC002163, LOC667484
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043P21.bB6Ng01-043P21.g
ACCDH869882DH869883
length1,1081,101
definitionDH869882|Mus musculus domesticus DNA, BAC clone: B6Ng01-043P21, 5' end.DH869883|Mus musculus domesticus DNA, BAC clone: B6Ng01-043P21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactatgaagaccaggctggctttgaactcacagagattctcatg
cctctgccttctgagtgctgggattacaggcatatgctaccacgcccagt
gttcatttaatattttctgattagattttttttttatttccatggttaaa
gtttaatggcctaagtcttccttgaaaacagcaggacacacatgtatgga
aacacacacacacacacacacacactcttcaataggttatctaatattca
gggttgacacagctatgcatgagagtgtccaagactacagaggcttgggc
agtcaaaaaataagatgttttgtttgttcttgtaaaccaggacattcact
actaggatatattcactacaattagcttgctggtttgggcacctgaactt
aatattgactttcttctcatctagtgagagtattggcagtaaccacaagt
ataaaagtattcaacattttatagcagatagtatataatcttttttacaa
ttttaaatccactcagtcattcaacagctttttattgggcaaggaattta
tagcaacggagtgtatcatggatatattgttttacgaccatgttttaaaa
agatatatgataaatataaacatgtgtacttatagatattagtttatggc
taattataacttacaggagataaaaacatgtcaaatactgttaaaaatgc
aagagtttattttatagatgctggcagaagcctgagactctgtcagagag
acaaagagttattacccacagagcagcaggtagcacaagattcatgcctg
tgccagctctgtgtcttctaagatctctggaatgacataggcatagagaa
atactgtgaggtagacacactgggttttgtcacatgtaaagggacactga
aattaagaaacagtcttctgaagttgattaaacgcaaacttatccatctt
tgtgccagaggagacatatcattattctaacagacagaaagaagcctgcc
ttgctctagacagacatgcttctgtttcaagctattacaacagaaacaaa
catgcttgataggcaagtaagaaaacaaaaagactctactcttacattct
tatcctcc
gaattctatgttatcagttaaagaccacactacattctggatcttttagc
tatagaaaccacactcatggtcacatgtagtctgtaaaagagttccatat
agtcacaccttaggctttattgtgcacctgaaattggaccttttcccaag
ttatacttgttttaaatatgctgacagtgagctacatgacattaaatttc
ctgaagtctgattcaaattaattaagataatctatactaggtatttattc
ttacctcttctcgaggtttgcttcccagtctggatagctatatatctata
tttatatatctcatatatatatatgtatgagattcttgccagaatgtgac
atacatgacccacagataaattgcactagaatcttaatttctgtctgaaa
catcatgagtgcagtccttgttgtctgttttttgttagcattgtatgctt
ttgatgtccaacaagagtcactcattaagttccacatgtgttattgtctg
ctcttctccaaccagcttctcttttctagactgttactgcaagccaatcc
taaaagcttctgaatcacgtggtctgcttaaagtcacagtagtaactcta
cttgtcagaactaattctgtatgtgagctttgtgtttctgagataaaata
cctctgaaaaccaatgtgaaggaagagagacttatttggttcgatgggtt
cagaactcttagtccgtggtcagcatggtcagcataggctcaatgttcct
ctgtaatatctccgtggacacttgtgctcattagcatattccctcccccc
tccccaatacatatcataatgatgggctttttgtgagggagaattttatg
gcagtgggagcatgaggtggaggaggatgctaatgccttggttttcctga
aaggagagaaaggagagagagacagagacgagacgagacccccagagaga
cgagagagatgaatggctggggacagaacataccatctaaagccagctcc
ttgctcctactcctttttttaaagtcctatcctttttttccatttttatt
aaggattagcccatttacaattccaagcataacacaaagttctccctaat
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_42451705_42452822
seq2: B6Ng01-043P21.b_48_1155

seq1  GAATTCACTATGAAGACCAGGCTGGCTTTGAACTCACAGAGATTCTCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGAAGACCAGGCTGGCTTTGAACTCACAGAGATTCTCATG  50

seq1  CCTCTGCCTTCTGAGTGCTGGGATTACAGGCATATGCTACCACGCCCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTTCTGAGTGCTGGGATTACAGGCATATGCTACCACGCCCAGT  100

seq1  GTTCATTTAATATTTTCTGATTAGATTTTTTTTTTATTTCCATGGTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTTAATATTTTCTGATTAGATTTTTTTTTTATTTCCATGGTTAAA  150

seq1  GTTTAATGGCCTAAGTCTTCCTTGAAAACAGCAGGACACACATGTATGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATGGCCTAAGTCTTCCTTGAAAACAGCAGGACACACATGTATGGA  200

seq1  AACACACACACACACACACACACACTCTTCAATAGGTTATCTAATATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACACACACACACACACACACTCTTCAATAGGTTATCTAATATTCA  250

seq1  GGGTTGACACAGCTATGCATGAGAGTGTCCAAGACTACAGAGGCTTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGACACAGCTATGCATGAGAGTGTCCAAGACTACAGAGGCTTGGGC  300

seq1  AGTCAAAAAATAAGATGTTTTGTTTGTTCTTGTAAACCAGGACATTCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAAAATAAGATGTTTTGTTTGTTCTTGTAAACCAGGACATTCACT  350

seq1  ACTAGGATATATTCACTACAATTAGCTTGCTGGTTTGGGCACCTGAACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGATATATTCACTACAATTAGCTTGCTGGTTTGGGCACCTGAACTT  400

seq1  AATATTGACTTTCTTCTCATCTAGTGAGAGTATTGGCAGTAACCACAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGACTTTCTTCTCATCTAGTGAGAGTATTGGCAGTAACCACAAGT  450

seq1  ATAAAAGTATTCAACATTTTATAGCAGATAGTATATAATCTTTTTTACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGTATTCAACATTTTATAGCAGATAGTATATAATCTTTTTTACAA  500

seq1  TTTTAAATCCACTCAGTCATTCAACAGCTTTTTATTGGGCAAGGAATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATCCACTCAGTCATTCAACAGCTTTTTATTGGGCAAGGAATTTA  550

seq1  TAGCAACGGAGTGTATCATGGATATATTGTTTTACGACCATGTTTTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACGGAGTGTATCATGGATATATTGTTTTACGACCATGTTTTAAAA  600

seq1  AGATATATGATAAATATAAACATGTGTACTTATAGATATTAGTTTATGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATATGATAAATATAAACATGTGTACTTATAGATATTAGTTTATGGC  650

seq1  TAATTATAACTTACAGGAGATAAAAACATGTCAAATACTGTTAAAAATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATAACTTACAGGAGATAAAAACATGTCAAATACTGTTAAAAATGC  700

seq1  AAGAGTTTATTTTATAGATGCTGGCAGAAGCCTGAGACTCTGTCAGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTTATTTTATAGATGCTGGCAGAAGCCTGAGACTCTGTCAGAGAG  750

seq1  ACAAAGAGTTATTACCCACAGAGCAGCAGGTAGCACAAGATTCATGCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAGTTATTACCCACAGAGCAGCAGGTAGCACAAGATTCATGCCTG  800

seq1  TGCCAGCTCTGTGTCTTCTAAGATCTCTGGAATGACATAGGCATAGAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGCTCTGTGTCTTCTAAGATCTCTGGAATGACATAGGCATAGAGAA  850

seq1  ATACTGTGAGGTAGACACACTGGGTTTTGTCACATGT-AAGGGACACTGA  899
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATACTGTGAGGTAGACACACTGGGTTTTGTCACATGTAAAGGGACACTGA  900

seq1  AATTAAGAAACAGTCTTCTGAAGTTGATTAAACGCAAACTTATCCATCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGAAACAGTCTTCTGAAGTTGATTAAACGCAAACTTATCCATCTT  950

seq1  TGTGCCAGAGGAAGACATTATCATTATTCTAACAGACAGAAAGAAGCCTG  999
      ||||||||||| ||||| ||||||||||||||||||||||||||||||||
seq2  TGTGCCAGAGG-AGACA-TATCATTATTCTAACAGACAGAAAGAAGCCTG  998

seq1  CCTTTGCTCTAGAACAAGACAATGCTTCTGTTTTCCAAGGCTATTTACAA  1049
      || ||||||||||   |||| ||||||||||||  ||| |||| ||||||
seq2  CC-TTGCTCTAGA--CAGAC-ATGCTTCTGTTT--CAA-GCTA-TTACAA  1040

seq1  CAAGAAACAAACATGCTTGATAGGCAAAGTAGAAAAC-AAAAGACTCTTA  1098
      | |||||||||||||||||||||||||   ||||||| ||||||||| ||
seq2  C-AGAAACAAACATGCTTGATAGGCAAGTAAGAAAACAAAAAGACTC-TA  1088

seq1  CTCTTACATTCTAATCCTCC  1118
      |||||||||||| |||||||
seq2  CTCTTACATTCTTATCCTCC  1108