BAC Information

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BAC

Clone NameB6Ng01-044K13
Chromosome16 (Build37)Y (Build37)
Map Location 58,606,070 - 58,606,776574,056 - 574,129
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene2610528E23Rik, Col8a1, LOC435480, LOC629342, LOC100043477, Dcbld2, St3gal6, LOC100043480
Downstream geneGm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044K13.bB6Ng01-044K13.g
ACCDH870348DH870349
length1,052232
definitionDH870348|Mus musculus domesticus DNA, BAC clone: B6Ng01-044K13, 5' end.DH870349|Mus musculus domesticus DNA, BAC clone: B6Ng01-044K13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(58,606,070 - 58,606,776)(574,056 - 574,129)
sequence
gaattctccatagattgaagtggaggtccatatgaaagatctatacactt
cgttagaggaatttatcccttagaaaacaacatggacaactgacactgac
acaaacatacatggagcaacaacaaaaacagccaatgtaaaaatatagag
tgaaaagaagtatggccaagctgacgactcatgaaacactcatgtttttg
atttaccctttgttgtggtttgaataggtatggcacctatgtgtttgaat
gcctgacccatatgaagtagcactattagaggtgtggccttgctggagta
gatatggccttgttggaggaagtatgtcactgtggggtgagctttgagct
attctatgctcaagctatgcccaatgtagtatatagttttcctcctgctt
cctgtgtgtcaagatgtagagcactgaacttcttctccagcaccatgtct
gcctacatgttgccatgcttcctgccatgctaataaaggactcaacctct
aagctgcaagccagccccaattaaatgttgtcatttatcagttgccatgg
tcatgtgcttcttcacagcaataaaaccctaactaagacagaagttggta
ccaggcaggagtagggtattcatgagtttctttggaccaatgtggatttt
gagactttggattaggaaagcaatgggatgctttaatcagggtttaatgg
atcataatagtaggaacatggaagatagtggtgctgagggtgatttgaac
tgtgggggcctagctcaagaagattcagagaagaattttagtatgtggcc
tagagactgttcttgtgagattttgactaagaatatggctgctttttgcc
cttttcagaaaagtctgcctgagtctaatgtgataagttttggattaatt
ccactggcagaggaatctcaaaatagcctattactgactctgttgtgtgg
ttatttatgttcattcctatgaagatcagaagggcaagcttagcaagaaa
aatacaaatgtacagtttgaggtgaaatgtgcaccaggagttgaatggag
ct
acaaaactcaacccatctctacagcctgagtactgagattaaaggtgtat
gcttccatgcctggctagcaattctattttcttttcttttttaaaagatt
tatttatttattttatgtatatggtgcattgtaactgtcttcagacacac
cagaagaaggcatcagatcctattacagttggttgtgagccaccatgtgg
ttgctgggaattgagctcaggacctctggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58606070_58606776
seq2: B6Ng01-044K13.b_46_752

seq1  GGAATTCTCCATAGATTGAAGTGGAGGTCCATATGAAAGATCTATACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCTCCATAGATTGAAGTGGAGGTCCATATGAAAGATCTATACACT  50

seq1  TCGTTAGAGGAATTTATCCCTTAGAAAACAACATGGACAACTGACACTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTAGAGGAATTTATCCCTTAGAAAACAACATGGACAACTGACACTGA  100

seq1  CACAAACATACATGGAGCAACAACAAAAACAGCCAATGTAAAAATATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACATACATGGAGCAACAACAAAAACAGCCAATGTAAAAATATAGA  150

seq1  GTGAAAAGAAGTATGGCCAAGCTGACGACTCATGAAACACTCATGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAAGAAGTATGGCCAAGCTGACGACTCATGAAACACTCATGTTTTT  200

seq1  GATTTACCCTTTGTTGTGGTTTGAATAGGTATGGCACCTATGTGTTTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTACCCTTTGTTGTGGTTTGAATAGGTATGGCACCTATGTGTTTGAA  250

seq1  TGCCTGACCCATATGAAGTAGCACTATTAGAGGTGTGGCCTTGCTGGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGACCCATATGAAGTAGCACTATTAGAGGTGTGGCCTTGCTGGAGT  300

seq1  AGATATGGCCTTGTTGGAGGAAGTATGTCACTGTGGGGTGAGCTTTGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGGCCTTGTTGGAGGAAGTATGTCACTGTGGGGTGAGCTTTGAGC  350

seq1  TATTCTATGCTCAAGCTATGCCCAATGTAGTATATAGTTTTCCTCCTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTATGCTCAAGCTATGCCCAATGTAGTATATAGTTTTCCTCCTGCT  400

seq1  TCCTGTGTGTCAAGATGTAGAGCACTGAACTTCTTCTCCAGCACCATGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTGTCAAGATGTAGAGCACTGAACTTCTTCTCCAGCACCATGTC  450

seq1  TGCCTACATGTTGCCATGCTTCCTGCCATGCTAATAAAGGACTCAACCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACATGTTGCCATGCTTCCTGCCATGCTAATAAAGGACTCAACCTC  500

seq1  TAAGCTGCAAGCCAGCCCCAATTAAATGTTGTCATTTATCAGTTGCCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGCAAGCCAGCCCCAATTAAATGTTGTCATTTATCAGTTGCCATG  550

seq1  GTCATGTGCTTCTTCACAGCAATAAAACCCTAACTAAGACAGAAGTTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTGCTTCTTCACAGCAATAAAACCCTAACTAAGACAGAAGTTGGT  600

seq1  ACCAGGCAGGAGTAGGGTATTCATGAGTTTCTTTGGACCAATGTGGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCAGGAGTAGGGTATTCATGAGTTTCTTTGGACCAATGTGGATTT  650

seq1  TGAGACTTTGGATTAGGAAAGCAATGGGATGCTTTAATCAGGGTTTAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTTTGGATTAGGAAAGCAATGGGATGCTTTAATCAGGGTTTAATG  700

seq1  GATCATA  707
      |||||||
seq2  GATCATA  707

seq1: chrY_574056_574129
seq2: B6Ng01-044K13.g_232_304

seq1  GCATCAGATCCCTATTATAGATGTTTGTGAGCCACCATGTGGTTGCTGGG  50
      ||||||||| ||||||| || || ||||||||||||||||||||||||||
seq2  GCATCAGAT-CCTATTACAGTTGGTTGTGAGCCACCATGTGGTTGCTGGG  49

seq1  AATTAAACTGAGGACCTCTGGAAG  74
      |||| | || ||||||||||||||
seq2  AATTGAGCTCAGGACCTCTGGAAG  73