BAC Information

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BAC

Clone NameB6Ng01-044K17
Chromosome16 (Build37)
Map Location 52,965,552 - 53,157,197
singlet/doubletdoublet
Overlap geneLOC667895
Upstream geneCblb, Alcam, LOC100043430
Downstream geneLOC433027
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044K17.bB6Ng01-044K17.g
ACCDH870356DH870357
length8171,111
definitionDH870356|Mus musculus domesticus DNA, BAC clone: B6Ng01-044K17, 5' end.DH870357|Mus musculus domesticus DNA, BAC clone: B6Ng01-044K17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(53,156,381 - 53,157,197)(52,965,552 - 52,966,664)
sequence
gaattcaagggaggggaggcaggagttgataagtgggtgcaggaacaccc
tcatagatgcaagggaagggaagatgggacagggtgtttcagggggaatc
cgggaaaggggatggcatttgaaatgtaaagaacatatgcaattaaaaat
tatccttgaaaaaaaaaagaataaaaaggttagtaaaatatttctgtgga
cattggagctaccttctcttcaagaccacaaagggatctagatcccacac
attgacctaagacagaacagattattgtcttctatctaaggagtacaaat
atataccttagatttttgttagtggtttgaggcaactaatacactatact
cttagcatgaaaatataaaataaaccatcagcttcaaagcagatatacta
aaacctgtcaaggcaattatacccatcaccatgagctaccactgctgatt
ggccttagaagtccctcataatgatcagaggaattaaggtagttctccaa
ataagcatattaccatggcagcccattcactccaccttcagcccaattat
ctagctttggcctttgaggctcagggatggtcagctaattaagctacatt
tgagcaagaaacaagaaagttgctttcactgcatttgcccctattcctca
gcaaaataaaagcttcatgatttaattaccacatcatttacatagtgaaa
aaaaggagaatattcctaaaaaggtctccactcaaagaccattactatag
aaaactgttgtggttttatttttgtcgatgttattgttttgtttattttt
gttgttgttgtggttag
gaattccatgtattgctttacatagaactattctgtatttcaatttctag
agatattaactacaatttgaagtacaaggactatgacaactcagagtgct
ttgtgttttgcttcatattctttatcaatatgtcattatctatatatgct
ctttgtagtaccatttcatttgtaccatttcaactgtagacttttttccc
atgaagaatgacattgaaatatgaatgctgcttatattactttgaagact
gccttgaatgagatggatatttcaaaaattgtatatatttcattctatga
ttttgaaatactttttattcttttctattattttgaagttctactaaagg
agccagtgttttctcttctaacaatgtagcatttttttaaaaaaatattc
aggtcttattggaagatctaaaaatggactagtgtaggaagcagcttctc
tctgaactttatgctctgttcctcttccttctagccctcctcattaactt
gaaatcatcaaccaaagattgcacagacgttagtgcatagactatatcat
ggtgttcttgatgtttttatcttaaaacagttgtagggtttattttacat
tttttcaaaagtaaatcatattaagtttttattttttggccaaagtgatg
gaaagagtttagttcacaatatcttagtgggtattcagtagatatacatt
caactgatgaattaaaatatctatatctttaacttggggttaaatcataa
atgattctataaaatcttaccatttattttcaggaaattttgttattaag
agtagttttaagaatttattttcagtcaatcatttcaattcctctttgaa
gattaataaaaattattgtgtaatccaaaatgaaaacattaaggcccttg
taagaatgaatagtatgaataagataatattgctgatttggtcatatttt
tctatatgtaatcatgttacatgaatgcatgtaaattattttatgaaacg
aatgcctgtttttccttctgtttgtatttggaagactggggtgatgatga
gcttctacattaaagtacctgttaccactgggctctgattattgggatca
taccaaccact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_53156381_53157197
seq2: B6Ng01-044K17.b_48_864 (reverse)

seq1  CTAACCACAACAACAACAAAAATAAACAAAACAATAACATCGACAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCACAACAACAACAAAAATAAACAAAACAATAACATCGACAAAAAT  50

seq1  AAAACCACAACAGTTTTCTATAGTAATGGTCTTTGAGTGGAGACCTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCACAACAGTTTTCTATAGTAATGGTCTTTGAGTGGAGACCTTTTT  100

seq1  AGGAATATTCTCCTTTTTTTCACTATGTAAATGATGTGGTAATTAAATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATATTCTCCTTTTTTTCACTATGTAAATGATGTGGTAATTAAATCA  150

seq1  TGAAGCTTTTATTTTGCTGAGGAATAGGGGCAAATGCAGTGAAAGCAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTTTTATTTTGCTGAGGAATAGGGGCAAATGCAGTGAAAGCAACT  200

seq1  TTCTTGTTTCTTGCTCAAATGTAGCTTAATTAGCTGACCATCCCTGAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTTTCTTGCTCAAATGTAGCTTAATTAGCTGACCATCCCTGAGCC  250

seq1  TCAAAGGCCAAAGCTAGATAATTGGGCTGAAGGTGGAGTGAATGGGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGCCAAAGCTAGATAATTGGGCTGAAGGTGGAGTGAATGGGCTGC  300

seq1  CATGGTAATATGCTTATTTGGAGAACTACCTTAATTCCTCTGATCATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTAATATGCTTATTTGGAGAACTACCTTAATTCCTCTGATCATTAT  350

seq1  GAGGGACTTCTAAGGCCAATCAGCAGTGGTAGCTCATGGTGATGGGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGACTTCTAAGGCCAATCAGCAGTGGTAGCTCATGGTGATGGGTATA  400

seq1  ATTGCCTTGACAGGTTTTAGTATATCTGCTTTGAAGCTGATGGTTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTTGACAGGTTTTAGTATATCTGCTTTGAAGCTGATGGTTTATTT  450

seq1  TATATTTTCATGCTAAGAGTATAGTGTATTAGTTGCCTCAAACCACTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTCATGCTAAGAGTATAGTGTATTAGTTGCCTCAAACCACTAAC  500

seq1  AAAAATCTAAGGTATATATTTGTACTCCTTAGATAGAAGACAATAATCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCTAAGGTATATATTTGTACTCCTTAGATAGAAGACAATAATCTG  550

seq1  TTCTGTCTTAGGTCAATGTGTGGGATCTAGATCCCTTTGTGGTCTTGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTTAGGTCAATGTGTGGGATCTAGATCCCTTTGTGGTCTTGAAG  600

seq1  AGAAGGTAGCTCCAATGTCCACAGAAATATTTTACTAACCTTTTTATTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTAGCTCCAATGTCCACAGAAATATTTTACTAACCTTTTTATTCT  650

seq1  TTTTTTTTTCAAGGATAATTTTTAATTGCATATGTTCTTTACATTTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCAAGGATAATTTTTAATTGCATATGTTCTTTACATTTCAAA  700

seq1  TGCCATCCCCTTTCCCGGATTCCCCCTGAAACACCCTGTCCCATCTTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCCCCTTTCCCGGATTCCCCCTGAAACACCCTGTCCCATCTTCCC  750

seq1  TTCCCTTGCATCTATGAGGGTGTTCCTGCACCCACTTATCAACTCCTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTGCATCTATGAGGGTGTTCCTGCACCCACTTATCAACTCCTGCC  800

seq1  TCCCCTCCCTTGAATTC  817
      |||||||||||||||||
seq2  TCCCCTCCCTTGAATTC  817

seq1: chr16_52965552_52966664
seq2: B6Ng01-044K17.g_70_1180

seq1  GAATTCCATGTATTGCTTTACATAGAACTATTCTGTATTTCAATTTCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTATTGCTTTACATAGAACTATTCTGTATTTCAATTTCTAG  50

seq1  AGATATTAACTACAATTTGAAGTACAAGGACTATGACAACTCAGAGTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTAACTACAATTTGAAGTACAAGGACTATGACAACTCAGAGTGCT  100

seq1  TTGTGTTTTGCTTCATATTCTTTATCAATATGTCATTATCTATATATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTTGCTTCATATTCTTTATCAATATGTCATTATCTATATATGCT  150

seq1  CTTTGTAGTACCATTTCATTTGTACCATTTCAACTGTAGACTTTTTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAGTACCATTTCATTTGTACCATTTCAACTGTAGACTTTTTTCCC  200

seq1  ATGAAGAATGACATTGAAATATGAATGCTGCTTATATTACTTTGAAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAATGACATTGAAATATGAATGCTGCTTATATTACTTTGAAGACT  250

seq1  GCCTTGAATGAGATGGATATTTCAAAAATTGTATATATTTCATTCTATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAATGAGATGGATATTTCAAAAATTGTATATATTTCATTCTATGA  300

seq1  TTTTGAAATACTTTTTATTCTTTTCTATTATTTTGAAGTTCTACTAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAATACTTTTTATTCTTTTCTATTATTTTGAAGTTCTACTAAAGG  350

seq1  AGCCAGTGTTTTCTCTTCTAACAATGTAGCATTTTTTTAAAAAAATATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTGTTTTCTCTTCTAACAATGTAGCATTTTTTTAAAAAAATATTC  400

seq1  AGGTCTTATTGGAAGATCTAAAAATGGACTAGTGTAGGAAGCAGCTTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTATTGGAAGATCTAAAAATGGACTAGTGTAGGAAGCAGCTTCTC  450

seq1  TCTGAACTTTATGCTCTGTTCCTCTTCCTTCTAGCCCTCCTCATTAACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACTTTATGCTCTGTTCCTCTTCCTTCTAGCCCTCCTCATTAACTT  500

seq1  GAAATCATCAACCAAAGATTGCACAGACGTTAGTGCATAGACTATATCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCATCAACCAAAGATTGCACAGACGTTAGTGCATAGACTATATCAT  550

seq1  GGTGTTCTTGATGTTTTTATCTTAAAACAGTTGTAGGGTTTATTTTACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTCTTGATGTTTTTATCTTAAAACAGTTGTAGGGTTTATTTTACAT  600

seq1  TTTTTCAAAAGTAAATCATATTAAGTTTTTA-TTTTTGGCCAAAGTGATG  649
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTTTTCAAAAGTAAATCATATTAAGTTTTTATTTTTTGGCCAAAGTGATG  650

seq1  GAAAGAGTTTAGTTCACAATATCTTAGTGGGTATTCAGTAGATATACATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGTTTAGTTCACAATATCTTAGTGGGTATTCAGTAGATATACATT  700

seq1  CAACTGATGAATTAAAATATCTATATCTTTAACTT-GGGTTAAATCATAA  748
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAACTGATGAATTAAAATATCTATATCTTTAACTTGGGGTTAAATCATAA  750

seq1  ATGATTCTATAAAATCTTACCATTTATTTTCAGGAAATTTTGTTATTAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCTATAAAATCTTACCATTTATTTTCAGGAAATTTTGTTATTAAG  800

seq1  AGTAGTTTTAAGAATTTATTTTCAGTCAATCATTTCAATTCCTCTTTGAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTTTAAGAATTTATTTTCAGTCAATCATTTCAATTCCTCTTTGAA  850

seq1  GATTAAT-AAAATTATTGTGTAATCCAAAATGAAAAACATTAAAGGCCCT  897
      ||||||| |||||||||||||||||||||||| |||||||| ||||||||
seq2  GATTAATAAAAATTATTGTGTAATCCAAAATG-AAAACATT-AAGGCCCT  898

seq1  TGTAAAGAATGAATAGTATGAATAAGATAATATTGCTGATTTGGTTCATA  947
      ||| |||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGT-AAGAATGAATAGTATGAATAAGATAATATTGCTGATTTGG-TCATA  946

seq1  -TTTTCTATATGTAATCATGTTACATGAATGCATGTAAATTATTTCATGA  996
       |||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTTTTCTATATGTAATCATGTTACATGAATGCATGTAAATTATTTTATGA  996

seq1  AACAGAATGCCTGTTTTTCCTTCTGTTTTGTAATTTGAAGACT-GTGTGA  1045
      ||| ||||||||||||||||||||| |||||| || ||||||| | ||||
seq2  AAC-GAATGCCTGTTTTTCCTTCTG-TTTGTATTTGGAAGACTGGGGTGA  1044

seq1  TGAATGAGCTTCTACATTAAAGTACCTGTGACCACTGTGCTCTGATTATT  1095
      || |||||||||||||||||||||||||| ||||||| ||||||||||||
seq2  TG-ATGAGCTTCTACATTAAAGTACCTGTTACCACTGGGCTCTGATTATT  1093

seq1  GGGATCATACCAATCACT  1113
      ||||||||||||| ||||
seq2  GGGATCATACCAACCACT  1111