BAC Information

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BAC

Clone NameB6Ng01-045K22
Chromosome16 (Build37)
Map Location 62,291,486 - 62,322,971
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668183
Downstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045K22.bB6Ng01-045K22.g
ACCDH871071DH871072
length1,0351,062
definitionDH871071|Mus musculus domesticus DNA, BAC clone: B6Ng01-045K22, 5' end.DH871072|Mus musculus domesticus DNA, BAC clone: B6Ng01-045K22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,291,486 - 62,292,099)(62,321,891 - 62,322,971)
sequence
gaattcattgtttttaatagttgagtagtactccattatgtaaatgtacc
acattttctgtatccattcctctgttgagggacatctgggttctttccag
cttctggctattataaataaggcttctatgaacatagtgcagtttgtgtt
ctcattacaggtttgagcatcttctgggtgtatgcccaggagtagtatat
tgctggatcctccggtagtattatgttcaagtttctgagaagcagccaaa
ctgatttccagaatggttgtagcagctatggaagcaaaatacccatggaa
ggagttacagatgcaaagtgtggagcagaaattgaaggaatgaccatcca
gagactgccccacccagggatccatcccataaacaaccaccaaaaccaga
cactattttgcatgccaacaagagcttgctgacaggagcctgatatagct
gtctcctgagaggctctgccagtggctgaaaaatacagaagtggatgctc
acagccatccattggactgagcacaggatccccaatgaaggagctagaga
aagtacacaaggagctgaaggggtttgcagccccataggaggaataacaa
tatgaactaaccaatacctccagagctccctaggactaaaccaccaacca
aagaaaatgcatgataggactcatggctctagttgcatatgtagaagagg
atggcctagttggattgcaggagaggcccttggtcctgtgaaggcttgat
gcccctttgtaggggaatgccagggccaggaagcaaggatgggttggtga
gcagcgggagaggggagaggggatagaagattttcagaggggacctaagg
aaaggggacaacttttgaatgtaaattaagtaatatctaataaaaaatta
aaaaagactttaaatcctctataaaaacatgatcattatggcaggaagca
ttgctctagatcaatacttgagagttttacatcctgcttctgcaggcagc
agtggaagaagcagttggaaatgacttttaaattt
gaattccacatgatagctggcaacagcatggactatggacacccacctgg
cctctagagccagtaggtgccaaggtcctcagcatgttcttcataggcag
tccagcccatgaatatcaatgggactctaggtggcagtatagaccatgaa
catctgcatggatttcagtgttagcacaggctacagacatcaacatagct
ccaagctgcagcaggaccacagacccgatgtgggccatggtagcagtgta
gactaccccctgccatagtttggctatggataccacaatagcctccatgg
caccacaggccatggacatcaacattatctctggggctacccagttccca
gacactaacacatccctagcatctgcctggctcatggacatcatcatggt
tttcagcagtgtttttcacttttccatggccactgacatgtctatattca
aaatttcttctgatactatctgtcgccatcttggcaccttctctctcagc
acactttatatatcatgcctggaccacaactatgttattgcttttcctga
actatctgaatctaatcaacatggtaaaatataattttgcttattattta
tgggaataataccatgtcttatgtcttttctaactgcgttagcaaataac
tagagttaaggatgttttcccattttcactaaaacactacctttgaacct
cttgtttcattgttattttaaatgtaagattaaacacagagtatggatta
tttgttaaaaaaataattctgtaaaattagagaatgaattactgagaaat
tgaatcttaatagactttgagctacagaattcagcatccttttatatcac
ttaagccagtcccattggttgcttcccttacccagtttcttatctgtcaa
acaatacttgcatctgtgtctgtgtatagccacccagggatatggaggat
aacgaaactacatataagcagcttacacataattttaaaaataatctctt
aattatcatggcaatgctaatcctctatgttccatgccccagcgataaag
tgtattttgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_62291486_62292099
seq2: B6Ng01-045K22.b_468_1076

seq1  TGCTGACAGGAGCCTGATATAGCTGTCTCCTGAGAGGCTCTGCCAGTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACAGGAGCCTGATATAGCTGTCTCCTGAGAGGCTCTGCCAGTGGC  50

seq1  TGAAAAATACAGAAGTGGATGCTCACAGCCATCCATTGGACTGAGCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATACAGAAGTGGATGCTCACAGCCATCCATTGGACTGAGCACAG  100

seq1  GATCCCCAATGAAGGAGCTAGAGAAAGTACACAAGGAGCTGAAGGGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCCAATGAAGGAGCTAGAGAAAGTACACAAGGAGCTGAAGGGGTTT  150

seq1  GCAGCCCCATAGGAGGAATAACAATATGAACTAACCAATACCTCCAGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCCCATAGGAGGAATAACAATATGAACTAACCAATACCTCCAGAGC  200

seq1  TCCCTAGGACTAAACCACCAACCAAAGAAAATGCATGATAGGACTCATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGGACTAAACCACCAACCAAAGAAAATGCATGATAGGACTCATGG  250

seq1  CTCTAGTTGCATATGTAGAAGAGGATGGCCTAGTTGGATTGCAGGAGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTTGCATATGTAGAAGAGGATGGCCTAGTTGGATTGCAGGAGAGG  300

seq1  CCCTTGGTCCTGTGAAGGCTTGATGCCCCTTTGTAGGGGAATGCCAGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGTCCTGTGAAGGCTTGATGCCCCTTTGTAGGGGAATGCCAGGGC  350

seq1  CAGGAAGCAAGGATGGGTTGGTGAGCAGCGGGAGAGGGGAGAGGGGATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGCAAGGATGGGTTGGTGAGCAGCGGGAGAGGGGAGAGGGGATAG  400

seq1  AAGATTTTCAGAGGGGAACCTAGGAAAGGGGACAACATTTGAAATGTAAA  450
      ||||||||||||||||| |  ||||||||||||||| |||| ||||||||
seq2  AAGATTTTCAGAGGGGACCTAAGGAAAGGGGACAACTTTTG-AATGTAAA  449

seq1  TAAAGTAAATATCTAATAAAAAATTAAAAAAGACTTTAAA-CCTCAAATA  499
      | |||| ||||||||||||||||||||||||||||||||| |||| |   
seq2  TTAAGT-AATATCTAATAAAAAATTAAAAAAGACTTTAAATCCTCTA--T  496

seq1  AAAAACATGATCATTATGGCAGGAAGCATGGCTCTAGATCAATACTTGAG  549
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAAAACATGATCATTATGGCAGGAAGCATTGCTCTAGATCAATACTTGAG  546

seq1  AGTTTTACATCCTG-GTCTGCAGGCAGCAGGTGGAGAGAAGCAGTTGGAA  598
      ||||||||||||||  ||||||||||||| ||||| ||||||||||||||
seq2  AGTTTTACATCCTGCTTCTGCAGGCAGCA-GTGGA-AGAAGCAGTTGGAA  594

seq1  TGGACTTTAGAAATTT  614
        ||||||  ||||||
seq2  ATGACTTT-TAAATTT  609

seq1: chr16_62321891_62322971
seq2: B6Ng01-045K22.g_67_1128 (reverse)

seq1  ACTCAAAATAACAACTTTATCTGCTGGGGCATGGAACATAGAAGGAATTA  50
      ||||||||||   |||||||| ||||||||||||||||||||  | ||||
seq2  ACTCAAAATA--CACTTTATC-GCTGGGGCATGGAACATAGA--GGATTA  45

seq1  GCATTGCAATGATAATTTAAGAGATTATATATAGAAATTTATGTGTAAGC  100
      ||||||| ||||||| |||||||||||| | |  ||| ||||||||||||
seq2  GCATTGCCATGATAA-TTAAGAGATTATTTTT--AAAATTATGTGTAAGC  92

seq1  TGCCTTTATATGTAGTTTTCGTTTATCCTCCATATCCCTGGGTGGCTTAT  150
      |||  |||||||||| ||||| |||||||||||||||||||||||| |||
seq2  TGC--TTATATGTAG-TTTCG-TTATCCTCCATATCCCTGGGTGGC-TAT  137

seq1  AACACAGACACAGATGCAAGTATTTGTTTTGACAGATAAGAAAACTGGGT  200
       |||||||||||||||||||||||   ||||||||||||| |||||||||
seq2  -ACACAGACACAGATGCAAGTATT--GTTTGACAGATAAG-AAACTGGGT  183

seq1  AAGGGAAGCAACCCAATGGGACTGGCTTAAGTGATATAAAAGGATGCTGA  250
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAGCAA-CCAATGGGACTGGCTTAAGTGATATAAAAGGATGCTGA  232

seq1  ATTCTGTAGCTCAAAGTCTATTAAAGATTCAATTTCTCAGTAATTCATTC  300
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATTCTGTAGCTCAAAGTCTATT-AAGATTCAATTTCTCAGTAATTCATTC  281

seq1  TCTAATTTTACAGAATTATTTTTTTAACAAATAATCCATACTCTGTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTTTACAGAATTATTTTTTTAACAAATAATCCATACTCTGTGTTT  331

seq1  AATCTTACATTTAAAATAACAATGAAACAAGAGGTTCAAAGGTAGTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTACATTTAAAATAACAATGAAACAAGAGGTTCAAAGGTAGTGTTT  381

seq1  TAGTGAAAATGGGAAAACATCCTTAACTCTAGTTATTTGCTAACGCAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAAAATGGGAAAACATCCTTAACTCTAGTTATTTGCTAACGCAGTT  431

seq1  AGAAAAGACATAAGACATGGTATTATTCCCATAAATAATAAGCAAAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGACATAAGACATGGTATTATTCCCATAAATAATAAGCAAAATTA  481

seq1  TATTTTACCATGTTGATTAGATTCAGATAGTTCAGGAAAAGCAATAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTACCATGTTGATTAGATTCAGATAGTTCAGGAAAAGCAATAACAT  531

seq1  AGTTGTGGTCCAGGCATGATATATAAAGTGTGCTGAGAGAGAAGGTGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGGTCCAGGCATGATATATAAAGTGTGCTGAGAGAGAAGGTGCCA  581

seq1  AGATGGCGACAGATAGTATCAGAAGAAATTTTGAATATAGACATGTCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCGACAGATAGTATCAGAAGAAATTTTGAATATAGACATGTCAGT  631

seq1  GGCCATGGAAAAGTGAAAAACACTGCTGAAAACCATGATGATGTCCATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGGAAAAGTGAAAAACACTGCTGAAAACCATGATGATGTCCATGA  681

seq1  GCCAGGCAGATGCTAGGGATGTGTTAGTGTCTGGGAACTGGGTAGCCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCAGATGCTAGGGATGTGTTAGTGTCTGGGAACTGGGTAGCCCCA  731

seq1  GAGATAATGTTGATGTCCATGGCCTGTGGTGCCATGGAGGCTATTGTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAATGTTGATGTCCATGGCCTGTGGTGCCATGGAGGCTATTGTGGT  781

seq1  ATCCATAGCCAAACTATGGCAGGGGGTAGTCTACACTGCTACCATGGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATAGCCAAACTATGGCAGGGGGTAGTCTACACTGCTACCATGGCCC  831

seq1  ACATCGGGTCTGTGGTCCTGCTGCAGCTTGGAGCTATGTTGATGTCTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCGGGTCTGTGGTCCTGCTGCAGCTTGGAGCTATGTTGATGTCTGTA  881

seq1  GCCTGTGCTAACACTGAAATCCATGCAGATGTTCATGGTCTATACTGCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGCTAACACTGAAATCCATGCAGATGTTCATGGTCTATACTGCCA  931

seq1  CCTAGAGTCCCATTGATATTCATGGGCTGGACTGCCTATGAAGAACATGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAGTCCCATTGATATTCATGGGCTGGACTGCCTATGAAGAACATGC  981

seq1  TGAGGACCTTGGCACCTACTGGCTCTAGAGGCCAGGTGGGTGTCCATAGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGACCTTGGCACCTACTGGCTCTAGAGGCCAGGTGGGTGTCCATAGT  1031

seq1  CCATGCTGTTGCCAGCTATCATGTGGAATTC  1081
      |||||||||||||||||||||||||||||||
seq2  CCATGCTGTTGCCAGCTATCATGTGGAATTC  1062