BAC Information

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BAC

Clone NameB6Ng01-046D16
Chromosome16 (Build37)
Map Location 87,283,066 - 87,283,937
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneN6amt1, Zfp294, ORF5, LOC100040088, Usp16, Cct8, B130034C11Rik, LOC435486, ORF63, Bach1, LOC100039901, Grik1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046D16.bB6Ng01-046D16.g
ACCDH871456DH871457
length470859
definitionDH871456|Mus musculus domesticus DNA, BAC clone: B6Ng01-046D16, 5' end.DH871457|Mus musculus domesticus DNA, BAC clone: B6Ng01-046D16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cataaaagcactaaactggaagtcataatatatacacaaaggacctgtag
ggcaatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatataaaaatatataaaaataaac
aaacacaacactgtgtgacaaggaacctagaaagatgtcctgagtttgtt
tctggcgcccatctactactggggacacagactaccatcaagagtaagat
gtttcctttcagcaaaatcttgcgagagagagatatagatagagatattg
atatatgaatgtagaatggatccctgcaaaagggaaacacatataggtac
atccatttgtacagcttctaattatatctatgtatatacatccatgggtg
tattgttccaaatagagtacagggcaaagagcccacttattggtctactt
tcgtcttgattttcatgctt

gaattcaggagttgagaggcagggaggaaagaaggctgcagcagatggtc
tgctatagagctggtgatgagactgggagattgtatttggagatgaggga
gaatgattgcactgagtctaccagcttccctggcctgaatcttaaatttt
tttaaaaaaagagatgacaaatttctatccatgtacaccttggattgatg
tgtgtgcagtatagtcttggaattgatattttgaaaaggcatctgaggta
ctgtgattgtgaagccaagattgagcccaatgatggaaactcttcttcct
gggaccgtcatcacacaatcagcaaaatatccgaacgctggtagtcacat
agctgtttgcaagatgcttcacaagtgtgtgttccctgatttcagttctc
tttgaactgaattgctaacttttataacaataacactcccaccctcaaac
ctaaatagagaatgctttgatgtgcagtggaactgagagtgctgtaaaat
aacttttatgttactgccgtctaggaggcttattcctgaataaacgcata
ctttctagctctctctgaactctggctggctggttcaactcagctgtttt
ggcccaatctcctcttcaagctgactgatttaaatgggcttttctcagtt
ctgactgaattgctctgcttggcttcaaattaactccaacaatctgtgct
aatcttaattaactccaacaatctgtgctatcttaattactccacatctg
tgctatcttaattactccacaatctgtgctatctaattactccaacaatc
tgtgctatcttctggcttctctcattttttggctcattctttcttcactt
gcaatctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_87283066_87283937
seq2: B6Ng01-046D16.g_66_924 (reverse)

seq1  TGAGATTGCAAGTGAAGATAGAATGAGCCAGAGAATGAGAAGGAGCCAGA  50
      |||||||||||||||||| ||||||||||| | |||||| || |||||||
seq2  TGAGATTGCAAGTGAAGAAAGAATGAGCCAAAAAATGAG-AGAAGCCAGA  49

seq1  AGATTAGCACAGATTGTTGGAGTTAATTAAGATTAGCACAGATTGTTGGA  100
      ||| |||||||||||||||||| ||||| ||| |||||||||||| ||||
seq2  AGA-TAGCACAGATTGTTGGAG-TAATT-AGA-TAGCACAGATTG-TGGA  94

seq1  GTTAATTAAGATTAGCACAGATTGTTGGAGTTAATTAAGATTAGCACAGA  150
      | ||||||||| ||||||||||   ||||| ||||||||| |||||||||
seq2  G-TAATTAAGA-TAGCACAGAT--GTGGAG-TAATTAAGA-TAGCACAGA  138

seq1  TTGTTGGAGTTAATTAAGATTAGCACAGATTGTTGGAGTTAATTTGAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGAGTTAATTAAGATTAGCACAGATTGTTGGAGTTAATTTGAAGC  188

seq1  CAAGCAGAGCAATTCAGTCAGAACCTGAGAAAAGCCCATTTAAATCAGTC  250
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAAGCAGAGCAATTCAGTCAGAA-CTGAGAAAAGCCCATTTAAATCAGTC  237

seq1  AGCTTGAAGAGGAGATTGGGCCAAAACAGCTGAGTTGAACCAGCCAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGAAGAGGAGATTGGGCCAAAACAGCTGAGTTGAACCAGCCAGCCA  287

seq1  GAGTTCAGAGAGAGCTAGAAAGTATGCGTTTATTCAGGAATAAGCCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAGAGAGAGCTAGAAAGTATGCGTTTATTCAGGAATAAGCCTCCT  337

seq1  AGACGGCAGTAACATAAAAGTTATTTTACAGCACTCTCAGTTCCACTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGGCAGTAACATAAAAGTTATTTTACAGCACTCTCAGTTCCACTGCA  387

seq1  CATCAAAGCATTCTCTATTTAGGTTTGAGGGTGGGAGTGTTATTGTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAAGCATTCTCTATTTAGGTTTGAGGGTGGGAGTGTTATTGTTATA  437

seq1  AAAGTTAGCAATTCAGTTCAAAGAGAACTGAAATCAGGGAACACACACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTAGCAATTCAGTTCAAAGAGAACTGAAATCAGGGAACACACACTT  487

seq1  GTGAAGCATCTTGCAAACAGCTATGTGACTACCAGCGTTCGGATATTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGCATCTTGCAAACAGCTATGTGACTACCAGCGTTCGGATATTTTG  537

seq1  CTGATTGTGTGATGACGGTCCCAGGAAGAAGAGTTTCCATCATTGGGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGTGTGATGACGGTCCCAGGAAGAAGAGTTTCCATCATTGGGCTC  587

seq1  AATCTTGGCTTCACAATCACAGTACCTCAGATGCCTTTTCAAAATATCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGGCTTCACAATCACAGTACCTCAGATGCCTTTTCAAAATATCAA  637

seq1  TTCCAAGACTATACTGCACACACATCAATCCAAGGTGTACATGGATAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGACTATACTGCACACACATCAATCCAAGGTGTACATGGATAGAA  687

seq1  ATTTGTCATCTCTTTTTTTAAAAAAATTTAAGATTCAGGCCAGGGAAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCATCTCTTTTTTTAAAAAAATTTAAGATTCAGGCCAGGGAAGCT  737

seq1  GGTAGACTCAGTGCAATCATTCTCCCTCATCTCCAAATACAATCTCCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGACTCAGTGCAATCATTCTCCCTCATCTCCAAATACAATCTCCCAG  787

seq1  TCTCATCACCAGCTCTATAGCAGACCATCTGCTGCAGCCTTCTTTCCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCACCAGCTCTATAGCAGACCATCTGCTGCAGCCTTCTTTCCTCC  837

seq1  CTGCCTCTCAACTCCTGAATTC  872
      ||||||||||||||||||||||
seq2  CTGCCTCTCAACTCCTGAATTC  859


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