BAC Information

Click to search

BAC

Clone NameB6Ng01-046H15
Chromosome16 (Build37)
Map Location 40,086,239 - 40,087,344
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667400
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046H15.bB6Ng01-046H15.g
ACCDH871632DH871633
length1,0711,214
definitionDH871632|Mus musculus domesticus DNA, BAC clone: B6Ng01-046H15, 5' end.DH871633|Mus musculus domesticus DNA, BAC clone: B6Ng01-046H15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagggactcacacttgtacagtaagcaatttgccaacgtttctgt
ctgcccagcctcctccattatgcatttttattctttcatctttaaacttg
gaattagagtgttcctttggtagttcatgctttagtttttgtacgccagc
aacctcctaggggagcttcaatccattcttcatgctggctataggtttgg
tacactacacaatatatttcccttcaatggcacctaaataattaattaaa
tgctaatattgcttttcttcttaacaattggtcttaagtgctaaatcaat
cacagattaattgaaacttcctcactagtttctcttttctctccataaat
tagcttttcctttcattttctttcctggacctttttccccttctcttcag
gcattctcagagggcatctaacattcgttgcttctgtagttttgaagtat
gcaatttggaaggaatgtgagtctggagggaattaaattaactagaagta
ctctgatttttgattaaattgcttcttttaaagatattatggagcattcc
aggtattcattttaaaattttcttccaaaaataaaaaaataaaataaaat
aaaaataaaaaagagagaaggagagagagacattaaagttcaaacaactc
ccattccttttctgtattacatttaaggtccacactcaaaatacctttat
catgattttagtccaaagtgccaagtaataagactacttttactgaattt
aatttgggaagaatgagagacggccaatggggagtggcagacaaatatga
aagaaaaggactgcgacccattaagtcctggatgagcagtacctaaaaca
gagggtaaaatccaaaggattgagacgttacgaggtgatcagatagcaat
gaaacgccctgaaagacacgaacactatctgagcaactctagcccatgtg
acagcagacccatcattcacgatgtagcatatatagtaggtcatttgtga
cactgagccacatcagactcaccattttttgttatttaccacagtcttaa
gaagcaatggtattgtgagaa
gaattcttcatgtacagttgaagtctaggcaagagtatttactctttcca
ctcctactcaatataaagggttcagctagaacaatattcctatttccttt
tgtatctatggtaaaatattcagatcataatgaacttagatgaaatagag
tttaatttcatcttacaattgtaggttactacacatcattgtgaggaaat
caaagtagggacctcaaacagataatcaaatcaaatccactatcaagatc
agataaagatgttgcctccatgatagctggcctgcttccttgtgctcagc
accatttgtctagtactgcaggctttcgcaataggctgggtcttcccaca
tcaagcaaggtaaaattttccttagaacagtctctcagagagactgttgt
tttccagaagatcctatattgtaccaagttgataaagttaaccattaaaa
acaataccccaatagaaagaaataaaaatggtttcaaacaagaaatcagg
aagtaataattttctctacttgtgaatatggacctgttttaatgattcta
aagacacgcttagaaaaatctttgaggacttgagagatggttcaatgttt
aagagcactagctgttcttgcagagatactgaattcaaatcctgtaccca
gatatgtcttcacaactgtctataactgggtcttatgtcccttctggcat
gcaggtgtacatgcatcagagtgctcatatattaaacaaacaaacaaaat
aaaaacaattatacaaaagttataaaaaagaagattatttgatctgaaaa
aatattcattacatattagaataagaaatgaacatttgcagttcagaatt
ttgcctgcatagcaataccaagctagctgagaaataatcagaaatagaat
tttactaacagacttagaaaatagcatagtttgaaaaataaatatcttgt
gtaacataagcagggaataaagtatctctacaaatattagatttgaagag
agaaattaagatcaagagatatgatcagatcagactggggaagaatggtt
tctaaaaaaatattcatctacacatttataaatgcctatagttttatgag
gctcttccaaggaaagactgtctaaatgatcaaacaaacacctatagacc
ggacatcagtcaagacgtctgtcctctggatgctaatccaattatctcaa
gcacgtgtcgtgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_40086239_40087344
seq2: B6Ng01-046H15.b_45_1115

seq1  GAATTCAGGGACTCACACTTGTACAGTAAGCAATTTGCCAACGTTTCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGACTCACACTTGTACAGTAAGCAATTTGCCAACGTTTCTGT  50

seq1  CTGCCCAGCCTCCTCCATTATGCATTTTTATTCTTTCATCTTTAAACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCAGCCTCCTCCATTATGCATTTTTATTCTTTCATCTTTAAACTTG  100

seq1  GAATTAGAGTGTTCCTTTGGTAGTTCATGCTTTAGTTTTTGTACGCCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGAGTGTTCCTTTGGTAGTTCATGCTTTAGTTTTTGTACGCCAGC  150

seq1  AACCTCCTAGGGGAGCTTCAATCCATTCTTCATGCTGGCTATAGGTTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCCTAGGGGAGCTTCAATCCATTCTTCATGCTGGCTATAGGTTTGG  200

seq1  TACACTACACAATATATTTCCCTTCAATGGCACCTAAATAATTAATTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTACACAATATATTTCCCTTCAATGGCACCTAAATAATTAATTAAA  250

seq1  TGCTAATATTGCTTTTCTTCTTAACAATTGGTCTTAAGTGCTAAATCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATATTGCTTTTCTTCTTAACAATTGGTCTTAAGTGCTAAATCAAT  300

seq1  CACAGATTAATTGAAACTTCCTCACTAGTTTCTCTTTTCTCTCCATAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATTAATTGAAACTTCCTCACTAGTTTCTCTTTTCTCTCCATAAAT  350

seq1  TAGCTTTTCCTTTCATTTTCTTTCCTGGACCTTTTTCCCCTTCTCTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTTCCTTTCATTTTCTTTCCTGGACCTTTTTCCCCTTCTCTTCAG  400

seq1  GCATTCTCAGAGGGCATCTAACATTCGTTGCTTCTGTAGTTTTGAAGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTCAGAGGGCATCTAACATTCGTTGCTTCTGTAGTTTTGAAGTAT  450

seq1  GCAATTTGGAAGGAATGTGAGTCTGGAGGGAATTAAATTAACTAGAAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTGGAAGGAATGTGAGTCTGGAGGGAATTAAATTAACTAGAAGTA  500

seq1  CTCTGATTTTTGATTAAATTGCTTCTTTTAAAGATATTATGGAGCATTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATTTTTGATTAAATTGCTTCTTTTAAAGATATTATGGAGCATTCC  550

seq1  AGGTATTCATTTTAAAATTTTCTTCCAAAAATAAAAAAATAAAATAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTCATTTTAAAATTTTCTTCCAAAAATAAAAAAATAAAATAAAAT  600

seq1  AAAAATAAAAAAGAGAGAAGGAGAGAGAGACATTAAAGTTCAAACAACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAAAAGAGAGAAGGAGAGAGAGACATTAAAGTTCAAACAACTC  650

seq1  CCATTCCTTTTCTGTATTACATTTAAGGTCCACACTCAAAATACCTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCTTTTCTGTATTACATTTAAGGTCCACACTCAAAATACCTTTAT  700

seq1  CATGATTTTAGTCCAAAGTGCCAAGTAATAAGACTACTTTTACTGAATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTTTAGTCCAAAGTGCCAAGTAATAAGACTACTTTTACTGAATTT  750

seq1  AATTTGGGAAGAATGAGAGACGGCCAATGGGGAGTGGCAGACAAATATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGGAAGAATGAGAGACGGCCAATGGGGAGTGGCAGACAAATATGA  800

seq1  AAGAAAAGGACTGCGACCCATTAAGTCCTGGATGAGCAGTACCTAAAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGGACTGCGACCCATTAAGTCCTGGATGAGCAGTACCTAAAACA  850

seq1  GAGGGTAAAAATCCAAAGGATTGAGACGTTACGAGGTGATCAGATAGCAA  900
      |||||| ||||||||||||||||||||||||||||||||||||||||| |
seq2  GAGGGT-AAAATCCAAAGGATTGAGACGTTACGAGGTGATCAGATAGC-A  898

seq1  ATGAAACGCCCTGAAAGAACAAGGAACACTATCCTTGGAGCAAACTCTAA  950
      ||||||||||||||||||   | ||||||||||    |||| |||||| |
seq2  ATGAAACGCCCTGAAAGA--CACGAACACTATC---TGAGC-AACTCT-A  941

seq1  GCCCATGTGACAAGGCAGAACCCAATCAATTTCAACAGATTGGTAGCAAT  1000
      ||||||||||||  |||||  || ||||  ||||   |||  ||||| ||
seq2  GCCCATGTGACA--GCAGA--CCCATCA--TTCA--CGAT--GTAGC-AT  980

seq1  ATATAGTAGGGTCATTTTGGTTGACAACTGAGCCACATCAAGACTCACCA  1050
      |||||||| ||||||||    |||| ||||||||||||| ||||||||||
seq2  ATATAGTA-GGTCATTT---GTGAC-ACTGAGCCACATC-AGACTCACCA  1024

seq1  TTTTTTGTTTATTTTACCCACAGTTCTTATAGAAAGCAAATGAGTAATTG  1100
      ||||||| ||||||   |||||| ||||| || |||| |||| || ||||
seq2  TTTTTTG-TTATTT--ACCACAG-TCTTA-AG-AAGC-AATG-GT-ATTG  1065

seq1  TGAGAA  1106
      ||||||
seq2  TGAGAA  1071