BAC Information

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BAC

Clone NameB6Ng01-046N24
Chromosome16 (Build37)
Map Location 83,219,713 - 83,306,692
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665260
Downstream geneEG545172, LOC100039572, EG621729, LOC640489
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046N24.bB6Ng01-046N24.g
ACCDH871905DH871906
length9591,033
definitionDH871905|Mus musculus domesticus DNA, BAC clone: B6Ng01-046N24, 5' end.DH871906|Mus musculus domesticus DNA, BAC clone: B6Ng01-046N24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,305,727 - 83,306,692)(83,219,713 - 83,220,755)
sequence
gaattctttatagtttttgatattaaccctttacagatggatagttagta
aaacatcttcccatttggtaggctgcttctatttctctaggaggaattta
tttgtgtgtttcaactgattatctatctcatcttgatttgagttcggtaa
gtgatatctaacctgaaaattatccatttcttttagatttttcgaacctg
ggttacgactggattttaaaatgggtccttatgtttttctcaattttaaa
ctgtctgttatatccccctttttcttttccttttcctttttgttttgtct
ctaatttcattaaattggattctgaggtcaaaaagctgtgtgactgggcg
agccagttgaaatcaagactgaactgtagatgtgtcaaaacccaaaaatg
tcaccatgaaattgacaagagaaagactgccttcctccttcctctcagaa
catgtaggcctcctgacccacacctccatcagtcttgcctggttggcaaa
ttacaggtttaactttctttctccctataagtacatgtccagcaagtatc
tggatatcctcttaatgcagatgaaaccatccctagccattgttgtacac
gtatcacagaaatcctcaatcactccccaagctttatatagcccttgtta
cattcatcaaaggacagctgtttcattgaagaaggctgttgctccctgac
cctcactactgaatggtcagtggaatgcactggcctgagtagagctgcat
tcctctgagtgcactatgatgcctggacccactgaggacagaggtacatc
ctggcctgtgttggatagtttctctttttgattgcttggataagggtttg
tctatctatatgctttctgaaagaccaactcttactctcattgattctgt
gtatttagtgtctgttagtgtagagttcagccctgagtgtgactttctgt
gatgactag
gaattcacaaacaacacgcaaagtgacaagggacaacttgacctttaaac
ttctttgtttgtagaaacttgttgaatgttgatgaacaattttaaaggag
tcatcaatagaaaattcagaaaaaaatattgtttgagggacttttgtgac
ataaaaagctgggatgtctgaatatatttgtttttctgtgtattacacat
cacacaatagctatgagaatacatccaatgtgataaaaacaaaacaaagc
aaagcaaaacaaaacaaaacaaacaacaacaacaacaacaaaaaaaaaaa
caaaacaatgactgctgctggatagtcctcttccagtaagaattttctga
tagttttacttttggtttcagtagaaaaagttctcaggagtttattgttt
gattgttgaattatggatagtctacctatctgagagtaatgggaagccag
taaaatgaacaaggatctgttttaacatccatcaaatatattcctcgatt
tcaagtactctcataagccttgttattcatgtaaggtttagtattagtgg
ttcgttgttaacaggttgaagataacaggttggagttaatgagttaatgt
gcatgaaattagatcaaaatgtgtcttggttagggtctcattgctatgag
gagacaccatgaccaaggcaatttttttttaataagcaacatgcttattt
ggagttgacttatcatttcagacgttagtctattatcatcattgtgggaa
gaatggcatagtgcagtcagacatggtgctggagaagaatctgagtgatc
tgcatcttgatctgccacatgcagagactgtgtgtcacttggggggtaac
ttgggccatcatgggagacctcaaagtccatgtccaaagaaatacactta
ttctaccaaggccgtgcttcctagtagtaccactcccttataagtaagca
tttaatacatgaatctgtgggggtccatacttttcaacaccaaactatta
taaaaataagaactgtggctgctaaattctgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_83305727_83306692
seq2: B6Ng01-046N24.b_41_999 (reverse)

seq1  CTAGTCATCACAGAAAAGTCAAACTCAGGGCTGAAACCTATAAAACAAAC  50
      ||||||||||||| ||||||| |||||||||||||  ||   | || |||
seq2  CTAGTCATCACAG-AAAGTCACACTCAGGGCTGAACTCT---ACACTAAC  46

seq1  AAACACTAAATACAAAGAATCAATGAGAGTAAGAGTTGGTTCTTTCAGAA  100
      | |||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  AGACACTAAATACACAGAATCAATGAGAGTAAGAGTTGG-TCTTTCAGAA  95

seq1  AGCCTATTAGATAGACAAACCCTTATCCAAGCAAACAAAAAGAGAAACTA  150
      ||| || ||||||||||||||||||||||||||| |||||||||||||||
seq2  AGCATA-TAGATAGACAAACCCTTATCCAAGCAATCAAAAAGAGAAACTA  144

seq1  TCCAACACAGGCCAGGATGTACCTCTGTCCTCAGTGGGTCCAGGCATCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACACAGGCCAGGATGTACCTCTGTCCTCAGTGGGTCCAGGCATCAT  194

seq1  TGTGCACTCAGAGGAATGAAGCCCTACCCAGGCCAGTGCATTCCACTGAC  250
       ||||||||||||||||| ||| |||| ||||||||||||||||||||||
seq2  AGTGCACTCAGAGGAATGCAGCTCTACTCAGGCCAGTGCATTCCACTGAC  244

seq1  CCTTCAGTAGTGAGGGTCAGGGAGCAACAGCCTTCTTCAATGAAACAGCT  300
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGTAGTGAGGGTCAGGGAGCAACAGCCTTCTTCAATGAAACAGCT  294

seq1  GTCCTTTGATGAATGTAACAAGGGCTATATAAAGCTTGGGGAGTGATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTGATGAATGTAACAAGGGCTATATAAAGCTTGGGGAGTGATTGA  344

seq1  GGATTTCTGTGATACGTGTACAACAATGGCTAGGGAAGGTTTCATTTGCA  400
      |||||||||||||||||||||||||||||||||||| |||||||| ||||
seq2  GGATTTCTGTGATACGTGTACAACAATGGCTAGGGATGGTTTCATCTGCA  394

seq1  TTAAGAGGATATCCAGATACTTGCTGGACATGTACTTATAGGGAGAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGGATATCCAGATACTTGCTGGACATGTACTTATAGGGAGAAAGA  444

seq1  AAGTTAAACCTGTAATTTGCCAACCAGGCAAGACTGATGGAGGTGTGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAACCTGTAATTTGCCAACCAGGCAAGACTGATGGAGGTGTGGGT  494

seq1  CAGGAGGCCTACATGTTCTGAGAGGAAGGAGGAAGGCAGTCTTTCTCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGCCTACATGTTCTGAGAGGAAGGAGGAAGGCAGTCTTTCTCTTG  544

seq1  TCAATTTCATGGTGACATTTTTGGGTTTTGACACATCTACAGTTCAGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTCATGGTGACATTTTTGGGTTTTGACACATCTACAGTTCAGTCT  594

seq1  TGATTTCAACTGGCTCGCCCAGTCACACAGCTTTCTGACCTCAGAATCCA  650
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGATTTCAACTGGCTCGCCCAGTCACACAGCTTTTTGACCTCAGAATCCA  644

seq1  ATTTAATGAAATTAGAGACAAAACAAAAAGGAAAAGGAAAAGAAAAAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGAAATTAGAGACAAAACAAAAAGGAAAAGGAAAAGAAAAAGGG  694

seq1  GGATATAACAGACAGTTTAAAATTGAGAAAAACATAAGGACCCATTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATAACAGACAGTTTAAAATTGAGAAAAACATAAGGACCCATTTTAA  744

seq1  AATCCTGTAGTAACCCAGGTTTGAAAAATCTAAAAGAAATGGATAATTTT  800
      ||||| || |||||||||||| ||||||||||||||||||||||||||||
seq2  AATCCAGTCGTAACCCAGGTTCGAAAAATCTAAAAGAAATGGATAATTTT  794

seq1  CAGGTTAGATATCACTTACCGAACTTAAATCAAGATGAGATAGATAATCA  850
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CAGGTTAGATATCACTTACCGAACTCAAATCAAGATGAGATAGATAATCA  844

seq1  GTTGAAACACACAAATAAATGCCTCCTAGAGAAATAGAAGCAGCCTACCA  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTTGAAACACACAAATAAATTCCTCCTAGAGAAATAGAAGCAGCCTACCA  894

seq1  AATGGGAAGATGTTTTACTAACTATCCATCTGTAAAGGGTTAATATCTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AATGGGAAGATGTTTTACTAACTATCCATCTGTAAAGGGTTAATATC-AA  943

seq1  AATATATAAAGAATTC  966
      ||  ||||||||||||
seq2  AAACTATAAAGAATTC  959

seq1: chr16_83219713_83220755
seq2: B6Ng01-046N24.g_67_1099

seq1  GAATTCAGAAACAACACGCAAAGTGACAAGGGACAACTTGACCTTTAAAC  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAACAACACGCAAAGTGACAAGGGACAACTTGACCTTTAAAC  50

seq1  TTCATTGTTTGTAGAAACTTGTTGAATGTTGATGAACAATTTTAAAGGAG  100
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTTTGTAGAAACTTGTTGAATGTTGATGAACAATTTTAAAGGAG  100

seq1  TCATCAATAGAAAATTCAGAAAAAAATATTGTTTGAGGGACTTTTGTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAATAGAAAATTCAGAAAAAAATATTGTTTGAGGGACTTTTGTGAC  150

seq1  ATAAAAAGCTGGGATGTCTGAATATATTTGTTTTTCTGTGTATTACACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGCTGGGATGTCTGAATATATTTGTTTTTCTGTGTATTACACAT  200

seq1  CACACAATAGCTATGAGAATACATCCAATGTGATAAAAACAAAACAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAATAGCTATGAGAATACATCCAATGTGATAAAAACAAAACAAAGC  250

seq1  AAAGCAAAACAAAACAAAACAAACAACAACAACAACAACAAAAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAACAAAACAAAACAAACAACAACAACAACAACAAAAAAAAAAA  300

seq1  CAAAACAATGACTGCTGCTGGATAGTCCTCTTCCAGTAAGAATTTTCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAATGACTGCTGCTGGATAGTCCTCTTCCAGTAAGAATTTTCTGA  350

seq1  TAGTTTTACTTTTGGTTTCAGTAGAAAAAGTTCTCAGGAGTTTATTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTACTTTTGGTTTCAGTAGAAAAAGTTCTCAGGAGTTTATTGTTT  400

seq1  GATTGTTGAATTATGGATAGTCTACCTATCTGAGAGTAATGGGAAGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTGAATTATGGATAGTCTACCTATCTGAGAGTAATGGGAAGCCAG  450

seq1  TAAAATGAACAAGGATCTGTTTTAACATCCATCAAATATATTCCTCGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGAACAAGGATCTGTTTTAACATCCATCAAATATATTCCTCGATT  500

seq1  TCAAGTACTCTCATAAGCCTTGTTATTCATGTAAGGTTTAGTATTAGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTACTCTCATAAGCCTTGTTATTCATGTAAGGTTTAGTATTAGTGG  550

seq1  TTCGTTGTTAACAGGTTGAAGATAACAGGTTGGAGTTAATGAGTTAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTTGTTAACAGGTTGAAGATAACAGGTTGGAGTTAATGAGTTAATGT  600

seq1  GCATGAAATTAGATCAAAATGTGTCTTGGTTAGGGTCTCATTGCTATGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAATTAGATCAAAATGTGTCTTGGTTAGGGTCTCATTGCTATGAG  650

seq1  GAGACACCATGACCAAGGCAATTTTTTTTTAATAAGCAACATGCTTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACCATGACCAAGGCAATTTTTTTTTAATAAGCAACATGCTTATTT  700

seq1  GGAGTTGACTTATCATTTCAGACGTTAGTCTATTATCATCATTGTGGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGACTTATCATTTCAGACGTTAGTCTATTATCATCATTGTGGGAA  750

seq1  GAATGGCATAGTGCAGTCAGACATGGTGCTGGAGAAGAATCTGAGTGATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCATAGTGCAGTCAGACATGGTGCTGGAGAAGAATCTGAGTGATC  800

seq1  TGCATCTTGATCTGCCACATGCAGAGACTGTGTGTCACTTGGGGGGTAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTTGATCTGCCACATGCAGAGACTGTGTGTCACTTGGGGGGTAAC  850

seq1  TTGGGCCATCATGGGAGACCTCAAAGTCCATGTCCAAAGAAATACACTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCCATCATGGGAGACCTCAAAGTCCATGTCCAAAGAAATACACTTA  900

seq1  TTCTAACAAGGCCGTGCTTCCTAGTAGTACCACTCCCTTATAAGTTAAGC  950
      ||||| |||||||||||||||||||||||||||||||||||||| |||||
seq2  TTCTACCAAGGCCGTGCTTCCTAGTAGTACCACTCCCTTATAAG-TAAGC  949

seq1  ATTTAAATACATGAATCTGTGGGGGTCCATACCTTTTCAAACAACCACAA  1000
      |||| ||||||||||||||||||||||||||| |||     ||||  |||
seq2  ATTT-AATACATGAATCTGTGGGGGTCCATACTTTT-----CAACACCAA  993

seq1  ACTTAATTATAAAAATAAAGAACTGTGGCTGCTAAATTCTGTT  1043
      |||  ||||||||||| ||||||||||||||||||||||||||
seq2  ACT--ATTATAAAAAT-AAGAACTGTGGCTGCTAAATTCTGTT  1033