BAC Information

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BAC

Clone NameB6Ng01-049M17
Chromosome16 (Build37)
Map Location 91,495,597 - 91,495,985
singlet/doubletsinglet
Overlap geneIfnar1
Upstream geneHunk, 2610039C10Rik, Mrap, 4921511H13Rik, 4931408A02Rik, LOC665863, 1110004E09Rik, 4930534H18Rik, Synj1, 1810007M14Rik, 4932438H23Rik, H3f3a-ps2, Olig2, Olig1, Ifnar2, Il10rb
Downstream geneLOC665939, LOC665947, Ifngr2, Tmem50b, ORF28, Gart, Son, Donson, Cryzl1, LOC100040653, Itsn1, Atp5o, Mrps6, Slc5a3, Kcne2, 1190017O12Rik, 4930563D23Rik, Kcne1, Dscr1, 2410124H12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049M17.bB6Ng01-049M17.g
ACCDH873954DH873955
length389892
definitionDH873954|Mus musculus domesticus DNA, BAC clone: B6Ng01-049M17, 5' end.DH873955|Mus musculus domesticus DNA, BAC clone: B6Ng01-049M17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaaatttgactatttttaaattttttttatagaaaactattaa
ctctacgtattatgtagaaaagataccagaactcttgccagagactactt
actgtttagaagttaaagcaatacatccgtcacttaagaaacacagcaat
tacagcactgtgcagtgtataagcaccacaggtaatgaagaaccgtgtta
gattccgtagccgagtaccctcagcattttaattggggcattttctcctc
ttaattcctgaactgttttatatgataaggtttcacaatggcttaatagt
cactaaagcaaaccactgagttaggggtgtggttggacatttgtcctagt
tcaattcccagtaccacacatgggagggagggagggagg
gaattcaaggttacagttggctggccagtctcgaacttacagatctgtgt
ttctctgcctcctgactgctaggattaaaggcatgtacccagcttcagtg
tttgtttgtttttaactctattgattctttgtaaatttcacaccatgcac
cccaaacccactcaactcctgttcgtccatttgtactctccacccttgca
acctcgcccccaaaggaaaacaaatgtcactgtggaagctgtcacgtgtg
acagtgtgtcccacagtacatcctctggtccacaccgctctccttgcaat
tgttcattacttgcagcgagtcattggtctggttcaaggctctggcttcg
gttacactatcattactagatcctcaaaggatccgttcctctcctataga
tccagtagatcttctatgaggagatcctgcagctttggatctgtaggact
ggtcccttcacaagctccagcagatcatagatggggtagatgttggggcg
ggccaactcaaagccctggatctgggtctgggtggtagctgagctggtca
gcccaccagctctcccacaccaaggctgtcagggagctctctagcactgc
cccagctagttcacccactgccgaatctggcaaggggcacaaatcagggt
cagctcacctgtgccacaccaacagggcccaggtgaggagcaggtctact
ttcccaagtgctgtggctcgtgaggggcagggccagctctcttgcctgtt
gtagtagtgaggggcatggggaagggaggtatccactactatcaacatag
acaatgatgggcaggcagctccccacacacagtccctggagcagctggct
caccttgctctacccagggtagctctactgtgtgtcatgcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_91495597_91495985
seq2: B6Ng01-049M17.b_40_428

seq1  GAATTCTAAAATTTGACTATTTTTAAATTTTTTTTATAGAAAACTATTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAATTTGACTATTTTTAAATTTTTTTTATAGAAAACTATTAA  50

seq1  CTCTACGTATTATGTAGAAAAGATACCAGAACTCTTGCCAGAGACTACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACGTATTATGTAGAAAAGATACCAGAACTCTTGCCAGAGACTACTT  100

seq1  ACTGTTTAGAAGTTAAAGCAATACATCCGTCACTTAAGAAACACAGCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTAGAAGTTAAAGCAATACATCCGTCACTTAAGAAACACAGCAAT  150

seq1  TACAGCACTGTGCAGTGTATAAGCACCACAGGTAATGAAGAACCGTGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCACTGTGCAGTGTATAAGCACCACAGGTAATGAAGAACCGTGTTA  200

seq1  GATTCCGTAGCCGAGTACCCTCAGCATTTTAATTGGGGCATTTTCTCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCGTAGCCGAGTACCCTCAGCATTTTAATTGGGGCATTTTCTCCTC  250

seq1  TTAATTCCTGAACTGTTTTATATGATAAGGTTTCACAATGGCTTAATAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCCTGAACTGTTTTATATGATAAGGTTTCACAATGGCTTAATAGT  300

seq1  CACTAAAGCAAACCACTGAGTTAGGGGTGTGGTTGGACATTTGTCCTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAGCAAACCACTGAGTTAGGGGTGTGGTTGGACATTTGTCCTAGT  350

seq1  TCAATTCCCAGTACCACACATGGGAGGGAGGGAGGGAGG  389
      |||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCCCAGTACCACACATGGGAGGGAGGGAGGGAGG  389