BAC Information

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BAC

Clone NameB6Ng01-050B01
Chromosome16 (Build37)
Map Location 87,314,921 - 87,315,815
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneN6amt1, Zfp294, ORF5, LOC100040088, Usp16, Cct8, B130034C11Rik, LOC435486, ORF63, Bach1, LOC100039901, Grik1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050B01.bB6Ng01-050B01.g
ACCDH874126DH874127
length908975
definitionDH874126|Mus musculus domesticus DNA, BAC clone: B6Ng01-050B01, 5' end.DH874127|Mus musculus domesticus DNA, BAC clone: B6Ng01-050B01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagaaaatgattaccacaacacacatacagacacacgcattact
ctgggtcaggggcagggaagaggacatagtttaagattacagctgtgcat
caggaaaggttgtaaccactgactatgagggacatccgagaccagcaaag
agctatcctcctgccgtgttcttttattcattttcttgattggttcatct
gtgaccttgtcacctgccccaggatgctgactattgtagatgacctgttg
tggtttctggatggaagcaaggcactgtcccatgagaagtgttgtgaaag
gggtttctttcttggggtcaggtggctcttttctttctttctataatcca
ttgccatttttcagaattgtaaacatttttataatatcctaattttataa
taacttaatcgatggagtagtgtgatatctttacacacataaacaacaca
tagcagtaaaatcagaattaatatttcatcttcataaacagctttctaaa
aaattttaatggacataaaataattgtacatatttatggggtacagtgtg
ataggtcagtaaatgtagtttacacttccttttcctagtcatgccataat
gtttggagtgttgaaatgttagtcttctagacacttataaaataacagat
acatttttgtaagcctctagcatccccactgtactgcagccactggaatt
tgctaattttttgcaaggtctttgaatacctttcccccacctcctactag
attcccattgcagtctattgtcatgcgtttactgtctaatctgatctact
gaagaagttcacttatgacagagaatatgtggtactcgtctttttctagc
agtctgtatctgatgtcttatttcacgtaacataatacaagctctgtcca
ttttcctg
gaattctttctgaacagaacaccagtagcacaggcactaagatcaacaat
taataaatgggacctcatgaaactgaaaaagcttctgtaaggcaaaggac
accatctataagacaaagtgacagcctacagaatgggaaaatatttttac
caatcttacattcaatagaggactaatatcgaaaatatatcaagaattca
agaaactagatatcaaaaaacaaaataatccaatttaaaaatagagtaca
gatccacaatggacaattctcaatagataaaaattaagtgtctgagaaaa
acttaaaaaaatcttcaaacaactttgtgattccattgtatacctgtcac
aactgctaagatcaacaacacaagtgacagctcatgctgataaaaatatg
gagtaggtaggagtacaaacttatacagctactatgacaatcaatatggc
agttcttcagaaattgagaatcaatctacttcaagatacggctatgccac
tcctagacatatacccaaaggacattccattttaccacaagaatacttgc
tcagccatgttcattttaatttaatcataatagtcagaaactggaaacaa
cctgaatgaccctcaacagaagaatggataaagaaattgtggtcaatttg
catgatggagtattactcagctgttaaaaaaaatgatatcataaaatttg
caagcaaatgaatagaaatagaaaaaaatcattctgcatgaagtaaccca
gacacagaaagataaatatgtatttacttataaatggatattaaccatta
agtaaataataactaagatacgatccaaagactcagaggggttgggtaaa
gaggagagtcttgggggaatgaatggatcttctgtagggaaatagaaagt
ttaggtagagtgtgagtgtacaacagatcaggaggtccagttgtagtggt
agaaggggaatagtatttagtacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_87314921_87315815
seq2: B6Ng01-050B01.b_41_935 (reverse)

seq1  AGAGCTTGTATTATGTTACGTGAAATAAGACATCAGATACAGACTGCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTGTATTATGTTACGTGAAATAAGACATCAGATACAGACTGCTAG  50

seq1  AAAAAGACGAGTACCACATATTCTCTGTCATAAGTGAACTTCTTCAGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGACGAGTACCACATATTCTCTGTCATAAGTGAACTTCTTCAGTAG  100

seq1  ATCAGATTAGACAGTAAACGCATGACAATAGACTGCAATGGGAATCTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATTAGACAGTAAACGCATGACAATAGACTGCAATGGGAATCTAGT  150

seq1  AGGAGGTGGGGGAAAGGTATTCAAAGACCTTGCAAAAAATTAGCAAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTGGGGGAAAGGTATTCAAAGACCTTGCAAAAAATTAGCAAATTC  200

seq1  CAGTGGCTGCAGTACAGTGGGGATGCTAGAGGCTTACAAAAATGTATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCTGCAGTACAGTGGGGATGCTAGAGGCTTACAAAAATGTATCTG  250

seq1  TTATTTTATAAGTGTCTAGAAGACTAACATTTCAACACTCCAAACATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATAAGTGTCTAGAAGACTAACATTTCAACACTCCAAACATTAT  300

seq1  GGCATGACTAGGAAAAGGAAGTGTAAACTACATTTACTGACCTATCACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGACTAGGAAAAGGAAGTGTAAACTACATTTACTGACCTATCACAC  350

seq1  TGTACCCCATAAATATGTACAATTATTTTATGTCCATTAAAATTTTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCCCATAAATATGTACAATTATTTTATGTCCATTAAAATTTTTTAG  400

seq1  AAAGCTGTTTATGAAGATGAAATATTAATTCTGATTTTACTGCTATGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGTTTATGAAGATGAAATATTAATTCTGATTTTACTGCTATGTGT  450

seq1  TGTTTATGTGTGTAAAGATATCACACTACTCCATCGATTAAGTTATTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATGTGTGTAAAGATATCACACTACTCCATCGATTAAGTTATTATA  500

seq1  AAATTAGGATATTATAAAAATGTTTACAATTCTGAAAAATGGCAATGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGGATATTATAAAAATGTTTACAATTCTGAAAAATGGCAATGGAT  550

seq1  TATAGAAAGAAAGAAAAGAGCCACCTGACCCCAAGAAAGAAACCCCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAAGAAAGAAAAGAGCCACCTGACCCCAAGAAAGAAACCCCTTTC  600

seq1  ACAACACTTCTCATGGGACAGTGCCTTGCTTCCATCCAGAAACCACAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACTTCTCATGGGACAGTGCCTTGCTTCCATCCAGAAACCACAACA  650

seq1  GGTCATCTACAATAGTCAGCATCCTGGGGCAGGTGACAAGGTCACAGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATCTACAATAGTCAGCATCCTGGGGCAGGTGACAAGGTCACAGATG  700

seq1  AACCAATCAAGAAAATGAATAAAAGAACACGGCAGGAGGATAGCTCTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATCAAGAAAATGAATAAAAGAACACGGCAGGAGGATAGCTCTTTG  750

seq1  CTGGTCTCGGATGTCCCTCATAGTCAGTGGTTACAACCTTTCCTGATGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTCGGATGTCCCTCATAGTCAGTGGTTACAACCTTTCCTGATGCA  800

seq1  CAGCTGTAATCTTAAACTATGTCCTCTTCCCTGCCCCTGACCCAGAGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTAATCTTAAACTATGTCCTCTTCCCTGCCCCTGACCCAGAGTAA  850

seq1  TGCGTGTGTCTGTATGTGTGTTGTGGTAATCATTTTCTGGAATTC  895
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTGTGTCTGTATGTGTGTTGTGGTAATCATTTTCTGGAATTC  895