BAC Information

Click to search

BAC

Clone NameB6Ng01-050P08
Chromosome16 (Build37)
Map Location 70,223,516 - 70,396,237
singlet/doubletdoublet
Overlap geneEG664930, Gbe1
Upstream geneSpeer2
Downstream geneD16Ertd519e, LOC100039231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050P08.bB6Ng01-050P08.g
ACCDH874744DH874745
length475298
definitionDH874744|Mus musculus domesticus DNA, BAC clone: B6Ng01-050P08, 5' end.DH874745|Mus musculus domesticus DNA, BAC clone: B6Ng01-050P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,223,516 - 70,223,996)(70,395,940 - 70,396,237)
sequence
cttcttcaatgtgacaaaatgcattttaacactggatgtcttgggcgact
tgtaaaaagaaaatccagagaatttaatctagcaacaattatcatcacta
aaggccatcggttctgtcctagtaaatggaaacatttttgcctatctgtt
tctagaacatgttgggaactaaaaaagagcccttgggaagaggggggagg
aaaagcccacaccctgccagagttttacctattctctggtctgtcaggag
ttggagggctgctatctaccttccacatatccccgggtgagcatctaagc
ctctgacccactcttcagggggtggccaggggcagccctacctggaatcc
caagagctactttgctaaagccaccagggttataggagagagggataagg
gaagaggttcccaagaccagcaagagtgagtcagtggattttgatgagca
gagactctctatggttttagagttt
ttcttgcgatggtttattttctgtgcgatgatctcacctagtccaatatt
gaggtctattactggaggtggatttgaactcctttccctcccacaactat
tttctgggtgcagaaaatgcaggcctgcttgagtcatcatgcccattttc
aacctcaaacattagcaagtcttcttactgacagtgaacctagcagtaat
catggcatatgagcttatgtgagataacaataaaaaaaggaagagcagga
taagaaagaagaggaggaggaaaaatgggaggaagagggagggaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_70223516_70223996
seq2: B6Ng01-050P08.b_39_519

seq1  GAATTCCTTCTTCAATGTGACAAAATGCATTTTAACACTGGATGTCTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTTCAATGTGACAAAATGCATTTTAACACTGGATGTCTTGG  50

seq1  GCGACTTGTAAAAAGAAAATCCAGAGAATTTAATCTAGCAACAATTATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACTTGTAAAAAGAAAATCCAGAGAATTTAATCTAGCAACAATTATCA  100

seq1  TCACTAAAGGCCATCGGTTCTGTCCTAGTAAATGGAAACATTTTTGCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAAAGGCCATCGGTTCTGTCCTAGTAAATGGAAACATTTTTGCCTA  150

seq1  TCTGTTTCTAGAACATGTTGGGAACTAAAAAAGAGCCCTTGGGAAGAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTCTAGAACATGTTGGGAACTAAAAAAGAGCCCTTGGGAAGAGGG  200

seq1  GGGAGGAAAAGCCCACACCCTGCCAGAGTTTTACCTATTCTCTGGTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAAAAGCCCACACCCTGCCAGAGTTTTACCTATTCTCTGGTCTGT  250

seq1  CAGGAGTTGGAGGGCTGCTATCTACCTTCCACATATCCCCGGGTGAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTTGGAGGGCTGCTATCTACCTTCCACATATCCCCGGGTGAGCAT  300

seq1  CTAAGCCTCTGACCCACTCTTCAGGGGGTGGCCAGGGGCAGCCCTACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCTCTGACCCACTCTTCAGGGGGTGGCCAGGGGCAGCCCTACCTG  350

seq1  GAATCCCAAGAGCTACTTTGCTAAAGCCACCAGGGTTATAGGAGAGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCCAAGAGCTACTTTGCTAAAGCCACCAGGGTTATAGGAGAGAGGG  400

seq1  ATAAGGGAAGAGGTTCCCAAGACCAGCAAGAGTGAGTCAGTGGATCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATAAGGGAAGAGGTTCCCAAGACCAGCAAGAGTGAGTCAGTGGATTTTGA  450

seq1  TGAGCAGAGACTCTCTATGGTTTTAGAGCTT  481
      |||||||||||||||||||||||||||| ||
seq2  TGAGCAGAGACTCTCTATGGTTTTAGAGTTT  481

seq1: chr16_70395940_70396237
seq2: B6Ng01-050P08.g_72_369 (reverse)

seq1  TTCCTCCCTCCCTCTTCCTCCCATTTTTCCTCCTCCTCTTCTTTCTTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCCTCCCTCTTCCTCCCATTTTTCCTCCTCCTCTTCTTTCTTATC  50

seq1  CTGCTCTTCCTTTTTTTATTGTTATCTCACATAAGCTCATATGCCATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTTCCTTTTTTTATTGTTATCTCACATAAGCTCATATGCCATGAT  100

seq1  TACTGCTAGGTTCACTGTCAGTAAGAAGACTTGCTAATGTTTGAGGTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTAGGTTCACTGTCAGTAAGAAGACTTGCTAATGTTTGAGGTTGA  150

seq1  AAATGGGCATGATGACTCAAGCAGGCCTGCATTTTCTGCACCCAGAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGCATGATGACTCAAGCAGGCCTGCATTTTCTGCACCCAGAAAAT  200

seq1  AGTTGTGGGAGGGAAAGGAGTTCAAATCCACCTCCAGTAATAGACCTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGGGAGGGAAAGGAGTTCAAATCCACCTCCAGTAATAGACCTCAA  250

seq1  TATTGGACTAGGTGAGATCATCGCACAGAAAATAAACCATCGCAAGAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGACTAGGTGAGATCATCGCACAGAAAATAAACCATCGCAAGAA  298