BAC Information

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BAC

Clone NameB6Ng01-050P20
Chromosome16 (Build37)
Map Location 28,003,965 - 28,005,154
singlet/doubletsinglet
Overlap genenone
Upstream geneOstn, Uts2d, Ccdc50
Downstream geneFgf12, 1600021P15Rik, EG666717
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050P20.bB6Ng01-050P20.g
ACCDH874766DH874767
length1,168249
definitionDH874766|Mus musculus domesticus DNA, BAC clone: B6Ng01-050P20, 5' end.DH874767|Mus musculus domesticus DNA, BAC clone: B6Ng01-050P20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagggagacaattctgaccatcttccaatgaggtatggaatag
agctggtgacagagactcagagagagtccttcatggtcatgtttgagaaa
tgttttctgatgaaaaagagctaaagaacccaaaagaaatctgtagttgc
agatgtctgtgtgagccctgaatgaatcaatggccaacaagagcttagga
ttaactaaggaatgagtaattggattttaccttcataacctctaactgac
ctggggcagggcaaagaaagggagcaatgggactaatgagaggattgtta
taggtctggctacctactaagatgcctcaagtgttctacaaggtatgtga
agagtgttccttcagaaacaaagcaggtatctctgggcacaaggagtgct
gaatataaaatataatttcatcatctttataagggcattctgaataattt
ttccatggaactcataagaactaaggcagcattgaaagtctaacaggctt
catttggaagacttgttctcatggttgattcttagagaggacaggttgat
ataaaaatcgattagctaaaataaagaagtaaaagtttaagaagtttttt
aaaaccactgtgtcatggcaattatggctaaccattacttgtgaagcaaa
ggagtgagttttgcttagtgggatgaaggtcacgaatgagtgcagttctt
ttagaactacaaaggaaaggaatcaaggcagacagaaagggtaggtatag
aaaaagactaggactgttgatttgctaatccactatttcattaaagtttc
actaatgcacatgagctggtgagtcctacagtgttgcttaacaacttcag
tgcacatagaagcactcagtgatgacacaaacagatattctgggtgttta
aaaatgtgtatttaaatggaaatttaaaactactactaatggtttaaaag
gtaaagtcagaagaaaaagagaagtgtacattctatctctagactcctat
tgttctgtcttctagaatgttaatcttcagtttagacaaataagcagatg
atctgaaagccaataatgcctatcaaatatgaaactatattcagtctcca
taaatatactcctagcgtacaaattacaataatttcaaggaattacaaga
gaaatcagtgggaacttg
tggggactttacagagggtacataaatgctagggccctgggtggcacggt
gggttttttggttgtggttgttggttgttgttggttttggtttattaagt
agtcatgtgcaaaaaagaaacaaccacaagaacaaatcatatatccgtag
aaagaacatcaaacttgccccatgggatgcaacactcctaatcatcaaga
agtagtctcattattataccaaatcctgacattattcagggctctcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_28003965_28005154
seq2: B6Ng01-050P20.b_48_1215 (reverse)

seq1  CAAGTCCCCACCTGA-TTCTC-TGTAATTCCCTGAGAAATTATTTGATAA  48
      ||||| |||| |||| ||||| ||||||||| |  |||||||||   |||
seq2  CAAGTTCCCA-CTGATTTCTCTTGTAATTCCTT--GAAATTATT--GTAA  45

seq1  TTTTGTACAGCTAGGAGTATAATTTATTGGAAGAACTAGATAGTAGTGTC  98
       ||||||| ||||||||||| ||||| ||||   |||  ||| |||| ||
seq2  -TTTGTAC-GCTAGGAGTAT-ATTTA-TGGA--GACTGAATA-TAGTTTC  88

seq1  ATATATGATAGGCATTATTTGGCTTTCAGATCATCTGCTTTATTTGGTCT  148
      |||| |||||||||||| |||||||||||||||||||| |||||| ||||
seq2  ATATTTGATAGGCATTA-TTGGCTTTCAGATCATCTGC-TTATTT-GTCT  135

seq1  AGACTGAAGATTAACATTCTAGAAGACAGGAAACCAAATAGGAGTCTAGA  198
      | |||||||||||||||||||||||||||  |||  ||||||||||||||
seq2  AAACTGAAGATTAACATTCTAGAAGACAG--AAC--AATAGGAGTCTAGA  181

seq1  GATAGAATGTACACTTCTCCTTTTTCTTCTGACTTTAACCCTTTTAAAAC  248
      |||||||||||||||||| ||||||||||||||||||  |||||| ||||
seq2  GATAGAATGTACACTTCT-CTTTTTCTTCTGACTTTA--CCTTTT-AAAC  227

seq1  CATTAGTAGTAGTTTTTAAATTTCCATTTAAATACACATTTTTAAACACC  298
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CATTAGTAGTAG-TTTTAAATTTCCATTTAAATACACATTTTTAAACACC  276

seq1  CAGAATATCTGTTTGTGTCATCACTGAGTGCTTCTATGTGCACTGAAGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATATCTGTTTGTGTCATCACTGAGTGCTTCTATGTGCACTGAAGTT  326

seq1  GTTAAGCAACACTGTAGGACTCACCAGCTCATGTGCATTAGTGAAACTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGCAACACTGTAGGACTCACCAGCTCATGTGCATTAGTGAAACTTT  376

seq1  AATGAAATAGTGGATTAGCAAATCAACAGTCCTAGTCTTTTTCTATACCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATAGTGGATTAGCAAATCAACAGTCCTAGTCTTTTTCTATACCT  426

seq1  ACCCTTTCTGTCTGCCTTGATTCCTTTCCTTTGTAGTTCTAAAAGAACTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTCTGTCTGCCTTGATTCCTTTCCTTTGTAGTTCTAAAAGAACTG  476

seq1  CACTCATTCGTGACCTTCATCCCACTAAGCAAAACTCACTCCTTTGCTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATTCGTGACCTTCATCCCACTAAGCAAAACTCACTCCTTTGCTTC  526

seq1  ACAAGTAATGGTTAGCCATAATTGCCATGACACAGTGGTTTTAAAAAACT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTAATGGTTAGCCATAATTGCCATGACACAGTGGTTTTAAAAAACT  576

seq1  TCTTAAACTTTTACTTCTTTATTTTAGCTAATCGATTTTTATATCAACCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAACTTTTACTTCTTTATTTTAGCTAATCGATTTTTATATCAACCT  626

seq1  GTCCTCTCTAAGAATCAACCATGAGAACAAGTCTTCCAAATGAAGCCTGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTCTAAGAATCAACCATGAGAACAAGTCTTCCAAATGAAGCCTGT  676

seq1  TAGACTTTCAATGCTGCCTTAGTTCTTATGAGTTCCATGGAAAAATTATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTTCAATGCTGCCTTAGTTCTTATGAGTTCCATGGAAAAATTATT  726

seq1  CAGAATGCCCTTATAAAGATGATGAAATTATATTTTATATTCAGCACTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGCCCTTATAAAGATGATGAAATTATATTTTATATTCAGCACTCC  776

seq1  TTGTGCCCAGAGATACCTGCTTTGTTTCTGAAGGAACACTCTTCACATAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCCCAGAGATACCTGCTTTGTTTCTGAAGGAACACTCTTCACATAC  826

seq1  CTTGTAGAACACTTGAGGCATCTTAGTAGGTAGCCAGACCTATAACAATC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAGAACACTTGAGGCATCTTAGTAGGTAGCCAGACCTATAACAATC  876

seq1  CTCTCATTAGTCCCATTGCTCCCTTTCTTTGCCCTGCCCCAGGTCAGTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATTAGTCCCATTGCTCCCTTTCTTTGCCCTGCCCCAGGTCAGTTA  926

seq1  GAGGTTATGAAGGTAAAATCCAATTACTCATTCCTTAGTTAATCCTAAGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTATGAAGGTAAAATCCAATTACTCATTCCTTAGTTAATCCTAAGC  976

seq1  TCTTGTTGGCCATTGATTCATTCAGGGCTCACACAGACATCTGCAACTAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTGGCCATTGATTCATTCAGGGCTCACACAGACATCTGCAACTAC  1026

seq1  AGATTTCTTTTGGGTTCTTTAGCTCTTTTTCATCAGAAAACATTTCTCAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCTTTTGGGTTCTTTAGCTCTTTTTCATCAGAAAACATTTCTCAA  1076

seq1  ACATGACCATGAAGGACTCTCTCTGAGTCTCTGTCACCAGCTCTATTCCA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGACCATGAAGGACTCTCTCTGAGTCTCTGTCACCAGCTCTATTCCA  1126

seq1  TACCTCATTGGAAGATGGTCAGAATTGTCTCCCTGTGAATTC  1190
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCATTGGAAGATGGTCAGAATTGTCTCCCTGTGAATTC  1168