BAC Information

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BAC

Clone NameB6Ng01-051A12
Chromosome16 (Build37)
Map Location 65,353,837 - 65,451,217
singlet/doubletdoublet
Overlap genenone
Upstream geneCkt2, 4930453N24Rik, Zfp654, LOC433036, Cggbp1, LOC668242, LOC100043815, LOC677448, Htr1f, LOC668247, LOC672931
Downstream genePou1f1, Chmp2b, EG383186, Vgll3, LOC664846, LOC100039035
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051A12.bB6Ng01-051A12.g
ACCDH874794DH874795
length1,083919
definitionDH874794|Mus musculus domesticus DNA, BAC clone: B6Ng01-051A12, 5' end.DH874795|Mus musculus domesticus DNA, BAC clone: B6Ng01-051A12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,450,121 - 65,451,217)(65,353,837 - 65,354,721)
sequence
gaattcctggtttgcacaatccatgactcacttcctgttttgatttccat
ttcatacagccctgaaactatttttagtgaagttcaacaaaaaaagtggg
tgctttttttaaaaatttttaatatttttttttattacgtattttcctca
attacatttccaatgctatcccaaaagtcccccataccctctcccccact
tccctacccacccattcccatttttttggccctggcattcccctgtactg
gggcatataaagtttgcttgtccaatgggcctctctttccagtgatggcc
gactaggccatcttttgatacatatacagctagagtcaagagctcctggg
tactggttagttcataatgttgctccacctatagggttgcagatcccttt
agctccttgggtactttctctagctccttcattgggagccctgtgatcca
tccaatagctgactgtgagcatcaacttatgtgtttgctaggccccggca
tagtctcacaagagacagctatatctgggtcctttcagcaaaatcttgct
agtgtatgcaatggtgtcagcgtttggaagctgattatggggtggatccc
tggatatggcagtccttttgtcacaactccaaactttgtctctgtaactc
cttccatgggtgttttgttcccaattctaagaaggggcacagtgtccaac
tcgagcgggtgcttttaactgtactttgggttccttttgttaaatctcct
aaattatgtctgttcttctgtgtgatgatttgctgaagacccctcttcaa
aatatgctctgcaatcctcttcccacattcattttccctaaattcactat
ttagttaagaaacaaagaccaatatccaagtcaagttcctggtaattgtt
tgatattaacacataatatttgaataataccttatactctaaagtaaaag
gggaaaacaatttatattactatttatttcactgctagaatagataaaat
attgtttgatatgaaaacaaacatgcatgagtgaggcttcttatttctga
ttttgatacagttactttttatggtttacattg
gaattcttttgatgctacccctgtaaagtatgttacttggccagaaaaaa
aatgtattgatataataaaaaccagaccattttcaggattaaaataacaa
aaaagaaaatttggtaattttatttacagtccgaggagaatgtacacttg
aaggaacagagctgccatagaaattcagagtgagacacgtgcctggtctt
ttctgtggcaaactcaagtttctgctgtactcatcaaaaccctttcttct
ctgtcagttatttctcatgaaaaagattgtacttgtgattttttaaaaga
tttattctctctctctctctctctctctctctctctctctctctcacaca
cacacacacacacacacgacattaagagtttaataagtggaaaaggcatt
tctgtggtgatctcactgttttgcatcactgtgatgggtgaatcctggaa
aggcacaaccccagacgctttgtcccaagactgcttcttgctgctgatgt
gtcttctcatgttgtcattgctgtattccttagttttactgacctggtgt
tattggacaaagaaaccctttctgcctatagtctgttataattgacatct
gggtattagcccacactattgggcaaatttcctgcagatcactatgaaag
acgtactttcatgaaataatgttgtttagatgaattaatgattttataga
attgcttatttgaatcaaacaattttaagaagttaaaacagtagatagaa
tgtttaaaattggaattaaatcacaatgtgcctctaccttgtagagtagt
gaaggctgcctaaaaataaatacaaaaaattttcatacgttactggtaca
tcttatacactaggaagaaaaatagcttggaacaattatgatcaaagaaa
actttcattctaggtcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_65450121_65451217
seq2: B6Ng01-051A12.b_43_1124 (reverse)

seq1  AATGTTAAAACATAAAAAGTAAACTAGTAATCATAAAATCAGAAAATAAG  50
      |||| |||| |||||||||| |||| || |||  |||||||| |||||| 
seq2  AATG-TAAACCATAAAAAGT-AACT-GT-ATC--AAAATCAG-AAATAA-  42

seq1  GAAGCACTCACTCATGCATTGTTTGTTTTCATATCAAAACAATATTTTAT  100
      ||||| |||||||||||| |||||||||||||||| ||||||||||||||
seq2  GAAGC-CTCACTCATGCA-TGTTTGTTTTCATATC-AAACAATATTTTAT  89

seq1  CTAATTCTAAGCAGTGAAATAAATAGTAATATAAATTGTTTTCCCCTTTT  150
      || ||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CT-ATTCT-AGCAGTGAAATAAATAGTAATATAAATTGTTTTCCCCTTTT  137

seq1  ACTTTTTAGAGTATAAGGTATTATTCAAATATTATGTGTTAATATCAAAC  200
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AC--TTTAGAGTATAAGGTATTATTCAAATATTATGTGTTAATATCAAAC  185

seq1  AATTACCAGGAACTTGACTTGGATATTGGTCTTTGTTTCTTAACTAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACCAGGAACTTGACTTGGATATTGGTCTTTGTTTCTTAACTAAATA  235

seq1  GTGAATTTAGGGAAAATGAATGTAGGAAGAGGATTGCAGAGCATATTTTG  300
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTGAATTTAGGGAAAATGAATGTGGGAAGAGGATTGCAGAGCATATTTTG  285

seq1  AAGAGGGGTCTTCAGCAAATCATCACACAGAAGAACAGACATAATTTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGGTCTTCAGCAAATCATCACACAGAAGAACAGACATAATTTAGG  335

seq1  AGATTTAACAAAAGGAACCCAAAGTACAGTTAAAAGCACCCGCTCGAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAACAAAAGGAACCCAAAGTACAGTTAAAAGCACCCGCTCGAGTT  385

seq1  GGACACTGTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACTGTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAG  435

seq1  TTACAGAGACAAAGTTTGGAGTTGTGACAAAAGGACTGCCATATCCAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAGACAAAGTTTGGAGTTGTGACAAAAGGACTGCCATATCCAGGG  485

seq1  ATCCACCCCATAATCAGCTTCCAAACGCTGACACCATTGCATACACTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCCCATAATCAGCTTCCAAACGCTGACACCATTGCATACACTAGC  535

seq1  AAGATTTTGCTGAAAGGACCCAGATATAGCTGTCTCTTGTGAGACTATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTGCTGAAAGGACCCAGATATAGCTGTCTCTTGTGAGACTATGC  585

seq1  CGGGGCCTAGCAAACACATAAGTTGATGCTCACAGTCAGCTATTGGATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGCCTAGCAAACACATAAGTTGATGCTCACAGTCAGCTATTGGATGG  635

seq1  ATCACAGGGCTCCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGGGCTCCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTAAA  685

seq1  GGGATCTGCAACCCTATAGGTGGAGCAACATTATGAACTAACCAGTACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCTGCAACCCTATAGGTGGAGCAACATTATGAACTAACCAGTACCC  735

seq1  AGGAGCTCTTGACTCTAGCTGTATATGTATCAAAAGATGGCCTAGTCGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTCTTGACTCTAGCTGTATATGTATCAAAAGATGGCCTAGTCGGC  785

seq1  CATCACTGGAAAGAGAGGCCCATTGGACAAGCAAACTTTATATGCCCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTGGAAAGAGAGGCCCATTGGACAAGCAAACTTTATATGCCCCAG  835

seq1  TACAGGGGAATGCCAGGGCCAAAAAAATGGGAATGGGTGGGTAGGGAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGGGAATGCCAGGGCCAAAAAAATGGGAATGGGTGGGTAGGGAAGT  885

seq1  GGGGGAGAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAATTGA  935

seq1  GGAAAATACGTAATAAAAAAAAATATTAAAAATTTTTAAAAAAAGCACCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATACGTAATAAAAAAAAATATTAAAAATTTTTAAAAAAAGCACCC  985

seq1  ACTTTTTTTGTTGAACTTCACTAAAAATAGTTTCAGGGCTGTATGAAATG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTTGTTGAACTTCACTAAAAATAGTTTCAGGGCTGTATGAAATG  1035

seq1  GAAATCAAAACAGGAAGTGAGTCATGGATTGTGCAAACCAGGAATTC  1097
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAAAACAGGAAGTGAGTCATGGATTGTGCAAACCAGGAATTC  1082

seq1: chr16_65353837_65354721
seq2: B6Ng01-051A12.g_67_950

seq1  GAATTCTTTTGATGCTACCCCTGTAAAGTATGTTACTTGGCCAGAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGATGCTACCCCTGTAAAGTATGTTACTTGGCCAGAAAAAA  50

seq1  AATGTATTGATATAATAAAAACCAGACCATTTTCAGGATTAAAATAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATTGATATAATAAAAACCAGACCATTTTCAGGATTAAAATAACAA  100

seq1  AAAAGAAAATTTGGTAATTTTATTTACAGTCCGAGGAGAATGTACACTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAATTTGGTAATTTTATTTACAGTCCGAGGAGAATGTACACTTG  150

seq1  AAGGAACAGAGCTGCCATAGAAATTCAGAGTGAGACACGTGCCTGGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACAGAGCTGCCATAGAAATTCAGAGTGAGACACGTGCCTGGTCTT  200

seq1  TTCTGTGGCAAACTCAAGTTTCTGCTGTACTCATCAAAACCCTTTCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGGCAAACTCAAGTTTCTGCTGTACTCATCAAAACCCTTTCTTCT  250

seq1  CTGTCAGTTATTTCTCATGAAAAAGATTGTACTTGTGATTTTTTAAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGTTATTTCTCATGAAAAAGATTGTACTTGTGATTTTTTAAAAGA  300

seq1  TTTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACA  350

seq1  CACACACACACACACACGACATTAAGAGTTTAATAAGTGGAAAAGGCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACGACATTAAGAGTTTAATAAGTGGAAAAGGCATT  400

seq1  TCTGTGGTGATCTCACTGTTTTGCATCACTGTGATGGGTGAATCCTGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGTGATCTCACTGTTTTGCATCACTGTGATGGGTGAATCCTGGAA  450

seq1  AGGCACAACCCCAGACGCTTTGTCCCAAGACTGCTTCTTGCTGCTGATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACAACCCCAGACGCTTTGTCCCAAGACTGCTTCTTGCTGCTGATGT  500

seq1  GTCTTCTCATGTTGTCATTGCTGTATTCCTTAGTTTTACTGACCTGGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTCATGTTGTCATTGCTGTATTCCTTAGTTTTACTGACCTGGTGT  550

seq1  TATTGGACAAAGAAACCCTTTCTGCCTATAGTCTGTTATAATTGACATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGACAAAGAAACCCTTTCTGCCTATAGTCTGTTATAATTGACATCT  600

seq1  GGGTATTAGCCCACACTATTGGGCAAATTTCCTGCAGATCACTATG-AAG  649
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGGTATTAGCCCACACTATTGGGCAAATTTCCTGCAGATCACTATGAAAG  650

seq1  ACGTACTTTCATGAAATAATGTTGTTTAGATGAATTAATGATTTTATAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTACTTTCATGAAATAATGTTGTTTAGATGAATTAATGATTTTATAGA  700

seq1  ATTGCTTATTTGAATCAAACAATTTTAAGAAGTTAAAACAGTAGATAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTATTTGAATCAAACAATTTTAAGAAGTTAAAACAGTAGATAGAA  750

seq1  TGTTTAAAATTGGAATTAAAATCACAATGTGCCTCTACCTTGTAGAGTAG  799
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGTTTAAAATTGGAATT-AAATCACAATGTGCCTCTACCTTGTAGAGTAG  799

seq1  TGAAGGCTGCCTAAAAATAAATACAAAAAATTTTCATACGTTACTGGTAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCTGCCTAAAAATAAATACAAAAAATTTTCATACGTTACTGGTAC  849

seq1  ATCTATTACACTAGGAAGAAAAATAGGCTTGGAACA  885
      ||||  ||||||||||||||||||| ||||||||||
seq2  ATCTTATACACTAGGAAGAAAAATA-GCTTGGAACA  884