BAC Information

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BAC

Clone NameB6Ng01-051F06
Chromosome16 (Build37)
Map Location 28,385,697 - 28,485,089
singlet/doubletdoublet
Overlap geneFgf12
Upstream geneCcdc50
Downstream gene1600021P15Rik, EG666717, Hrasls, Atp13a5, Atp13a4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051F06.bB6Ng01-051F06.g
ACCDH875004DH875005
length1,1391,148
definitionDH875004|Mus musculus domesticus DNA, BAC clone: B6Ng01-051F06, 5' end.DH875005|Mus musculus domesticus DNA, BAC clone: B6Ng01-051F06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,483,933 - 28,485,089)(28,385,697 - 28,386,863)
sequence
gaattcaaaagacgctcaaaaactagagtaagaacaagagggccaatgaa
agaaaagttcaaagtgagcccagcccagctcagatagacgccctgtgtca
gagtgtctattgtgctcgaagcctggagcttagactctcctgccttcctg
agaacctagaggtcaccctggacatgctctgtggcttctgcctgagtcca
cctgacttacccctgttgctgtcgcctacctcttcatcatttcatcgtct
gggcttttgcaaattatcattagccaggttaccatctccaagaaatctcc
cctccatcccaagaccatagtcagggacttcttcacaatgcagatgcctt
catttcttcacaataagtcttccaaaccattccatagggtagtcttgtcc
ttagaacaatgctttattttcagtggcttatacaacatttttcaggattt
tagaaagtttccctttgactgatccccacctgacccagtcttcacttagg
catgcctcctctcagcttttgaatcttagctgtttagtttctctgtgaag
cctcttctgactgccctgtccttgtacaagcttccacagtcttgtccttt
ctcccctcttccttcacagatgtaggttctacagttagcttgagtgacta
tgactcctatctcttcctctcatcattgattctaacctgggttttggcaa
gaactggggcagcttcctttccatgagagcacaatacctagtgttgtaga
tgaaaactaaacatttgttgaatgagtgaccgaaggcaagtggaaatatt
ttgactccagaatggggagactccagctatagcttacaggaaaccagaca
gaaagagcgtcacccctaggaatgttcaagttaatttattttccctgagg
actcgtgaaagaactatatgcagtgttggcaagggagggtaggaaaaatt
aaccgggagaggcctaaatctgactgaagaaagcagacagagcagactca
gtgtggatcgtagatctctgatggggtactgtagcagacaaaaatctttc
atttcacaatgcctacaatgactaaatctggctgatttagactatatcta
agcccaactaatggcccttacaccccacagagtgaggaa
gaattcaatgaacagcacaggttgtcagtccacaagatcaatggacgagg
cgaagcatccaagagtcttttcacgctgtagagcttttacaattatatct
cccacaaatcttccactctatgctgcagccatattgaaattatttcctgt
taggcttactcattaatgcagtgtgcctattccagacactgagcaactta
ggacagagtggtgaaaaagaaaggtgtgacccttgttattgtgacagtta
gtttgaaatatcataaaaatattataaattaattccatctgtgttctgtg
tgtccatctttagaaaccagaaagaaagttgatgtgtaaaaatgtagatt
tcccaggatcataaaggcagccaacaaatgagctgatttgaaatctaaat
cccagggctccagtgagactgttattcttaaataagagacacgttaagca
attagaatcctaatagttataaaaataatgaggaaaacagacaatagtag
caatattagaagtgtgaaatactcctgaaatactctacctatccaaatat
aatttatttcctatacaattgcatagagaaagtacaaaacatctgacttg
agcaaactagtttacactttctacaactagactgtgagcctcattaacac
gttaccatgcaaaaaatgtctgcctcactctgaaactataatgagtgcca
cagaaataaatacaacgtgttaaattcttttagaaatggtggtattaaga
atgattttaaaacgtaagactgattacttccttttatcattctctagcta
aaagctttgccttgacgcctctctactgtaaaaggtgactggaatgtttc
caaacattctcaaaccacctgaaattatcagtaactttccctgactctat
ttcccacaacagcgacatgaccctcccccatgcccccaatgtctgaaaca
tgactcagcactctccacacatctctttccaaaccagtcaactcattttc
tcaacatggcagacgcttttctccaccagtgattcctgcttcttatctga
aactcaattttctaatctagatattgtttcttatctaggtttcagattca
attgaactactgtctgatcatggctttggagggaatcctgatctctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_28483933_28485089
seq2: B6Ng01-051F06.b_45_1183 (reverse)

seq1  TTCCTCACTCTTGTGGGGGTTTGTAAGGGCAATTAGGTTTGGGCTGTAGA  50
      |||||||||| |||||||   ||||||||| |||||  ||||||| ||||
seq2  TTCCTCACTC-TGTGGGG---TGTAAGGGCCATTAG--TTGGGCT-TAGA  43

seq1  TATTAGGTCTAAAATTCAAGCAGATTTTAGTCATCTGTAGGCATTTGTTG  100
      |||   |||||||  |||  |||| ||||||||| ||||||||||   ||
seq2  TAT--AGTCTAAA--TCAGCCAGA-TTTAGTCAT-TGTAGGCATT--GTG  85

seq1  AAATG-GAGATTTTTGTCTGCTACAGTAACCCCATCAGAGATCTAACGAT  149
      |||||  |||||||||||||||||||| |||||||||||||||| |||||
seq2  AAATGAAAGATTTTTGTCTGCTACAGT-ACCCCATCAGAGATCT-ACGAT  133

seq1  CCACACTGAGTCTGCTCTGTCTGCTTTCTTCAGTCAGATTTAGGCCTCTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCACACTGAGTCTGCTCTGTCTGCTTTCTTCAGTCAGATTTAGGCCTCTC  183

seq1  CCGGTTAATTTTTCCTATCCCTCCCTTGCCAACACTGCATATAGTTCTTT  249
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCGGTTAATTTTTCCTA-CCCTCCCTTGCCAACACTGCATATAGTTCTTT  232

seq1  CACGAGTCCTCAGGGAAAATAAATTAACTTGGAACATTCCTAGGGGTGAC  299
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CACGAGTCCTCAGGGAAAATAAATTAACTT-GAACATTCCTAGGGGTGAC  281

seq1  GCTCTTTCTGTCTGGTTTCCTGTAAGCTATAGCTGGAGTCTCCCCATTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTCTGTCTGGTTTCCTGTAAGCTATAGCTGGAGTCTCCCCATTCT  331

seq1  GGAGTCAAAATATTTCCACTTGCCTTCGGTCACTCATTCAACAAATGTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCAAAATATTTCCACTTGCCTTCGGTCACTCATTCAACAAATGTTT  381

seq1  AGTTTTCATCTACAACACTAGGTATTGTGCTCTCATGGAAAGGAAGCTGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCATCTACAACACTAGGTATTGTGCTCTCATGGAAAGGAAGCTGC  431

seq1  CCCAGTTCTTGCCAAAACCCAGGTTAGAATCAATGATGAGAGGAAGAGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTCTTGCCAAAACCCAGGTTAGAATCAATGATGAGAGGAAGAGAT  481

seq1  AGGAGTCATAGTCACTCAAGCTAACTGTAGAACCTACATCTGTGAAGGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTCATAGTCACTCAAGCTAACTGTAGAACCTACATCTGTGAAGGAA  531

seq1  GAGGGGAGAAAGGACAAGACTGTGGAAGCTTGTACAAGGACAGGGCAGTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAGAAAGGACAAGACTGTGGAAGCTTGTACAAGGACAGGGCAGTC  581

seq1  AGAAGAGGCTTCACAGAGAAACTAAACAGCTAAGATTCAAAAGCTGAGAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGCTTCACAGAGAAACTAAACAGCTAAGATTCAAAAGCTGAGAG  631

seq1  GAGGCATGCCTAAGTGAAGACTGGGTCAGGTGGGGATCAGTCAAAGGGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATGCCTAAGTGAAGACTGGGTCAGGTGGGGATCAGTCAAAGGGAA  681

seq1  ACTTTCTAAAATCCTGAAAAATGTTGTATAAGCCACTGAAAATAAAGCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTAAAATCCTGAAAAATGTTGTATAAGCCACTGAAAATAAAGCAT  731

seq1  TGTTCTAAGGACAAGACTACCCTATGGAATGGTTTGGAAGACTTATTGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTAAGGACAAGACTACCCTATGGAATGGTTTGGAAGACTTATTGTG  781

seq1  AAGAAATGAAGGCATCTGCATTGTGAAGAAGTCCCTGACTATGGTCTTGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGAAGGCATCTGCATTGTGAAGAAGTCCCTGACTATGGTCTTGG  831

seq1  GATGGAGGGGAGATTTCTTGGAGATGGTAACCTGGCTAATGATAATTTGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGGGGAGATTTCTTGGAGATGGTAACCTGGCTAATGATAATTTGC  881

seq1  AAAAGCCCAGACGATGAAATGATGAAGAGGTAGGCGACAGCAACAGGGGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCCAGACGATGAAATGATGAAGAGGTAGGCGACAGCAACAGGGGT  931

seq1  AAGTCAGGTGGACTCAGGCAGAAGCCACAGAGCATGTCCAGGGTGACCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGGTGGACTCAGGCAGAAGCCACAGAGCATGTCCAGGGTGACCTC  981

seq1  TAGGTTCTCAGGAAGGCAGGAGAGTCTAAGCTCCAGGCTTCGAGCACAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTCTCAGGAAGGCAGGAGAGTCTAAGCTCCAGGCTTCGAGCACAAT  1031

seq1  AGACACTCTGACACAGGGCGTCTATCTGAGCTGGGCTGGGCTCACTTTGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTCTGACACAGGGCGTCTATCTGAGCTGGGCTGGGCTCACTTTGA  1081

seq1  ACTTTTCTTTCATTGGCCCTCTTGTTCTTACTCTAGTTTTTGAGCGTCTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCTTTCATTGGCCCTCTTGTTCTTACTCTAGTTTTTGAGCGTCTT  1131

seq1  TTGAATTC  1157
      ||||||||
seq2  TTGAATTC  1139

seq1: chr16_28385697_28386863
seq2: B6Ng01-051F06.g_67_1214

seq1  GAATTCAATGAACAGCACAGGTTGTCAGTCCACAAGATCAATGGACGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGAACAGCACAGGTTGTCAGTCCACAAGATCAATGGACGAGG  50

seq1  CGAAGCATCCAAGAGTCTTTTCACGCTGTAGAGCTTTTACAATTATATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGCATCCAAGAGTCTTTTCACGCTGTAGAGCTTTTACAATTATATCT  100

seq1  CCCACAAATCTTCCACTCTATGCTGCAGCCATATTGAAATTATTTCCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAAATCTTCCACTCTATGCTGCAGCCATATTGAAATTATTTCCTGT  150

seq1  TAGGCTTACTCATTAATGCAGTGTGCCTATTCCAGACACTGAGCAACTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTACTCATTAATGCAGTGTGCCTATTCCAGACACTGAGCAACTTA  200

seq1  GGACAGAGTGGTGAAAAAGAAAGGTGTGACCCTTGTTATTGTGACAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAGTGGTGAAAAAGAAAGGTGTGACCCTTGTTATTGTGACAGTTA  250

seq1  GTTTGAAATATCATAAAAATATTATAAATTAATTCCATCTGTGTTCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAATATCATAAAAATATTATAAATTAATTCCATCTGTGTTCTGTG  300

seq1  TGTCCATCTTTAGAAACCAGAAAGAAAGTTGATGTGTAAAAATGTAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATCTTTAGAAACCAGAAAGAAAGTTGATGTGTAAAAATGTAGATT  350

seq1  TCCCAGGATCATAAAGGCAGCCAACAAATGAGCTGATTTGAAATCTAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGATCATAAAGGCAGCCAACAAATGAGCTGATTTGAAATCTAAAT  400

seq1  CCCAGGGCTCCAGTGAGACTGTTATTCTTAAATAAGAGACACGTTAAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGCTCCAGTGAGACTGTTATTCTTAAATAAGAGACACGTTAAGCA  450

seq1  ATTAGAATCCTAATAGTTATAAAAATAATGAGGAAAACAGACAATAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAATCCTAATAGTTATAAAAATAATGAGGAAAACAGACAATAGTAG  500

seq1  CAATATTAGAAGTGTGAAATACTCCTGAAATACTCTACCTATCCAAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTAGAAGTGTGAAATACTCCTGAAATACTCTACCTATCCAAATAT  550

seq1  AATTTATTTCCTATACAATTGCATAGAGAAAGTACAAAACATCTGACTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTTCCTATACAATTGCATAGAGAAAGTACAAAACATCTGACTTG  600

seq1  AGCAAACTAGTTTACACTTTCTACAACTAGACTGTGAGCCTCATTAACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACTAGTTTACACTTTCTACAACTAGACTGTGAGCCTCATTAACAC  650

seq1  GTTACCATGCAAAAAATGTCTGCCTCACTCTGAAACTATAATGAGTGCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCATGCAAAAAATGTCTGCCTCACTCTGAAACTATAATGAGTGCCA  700

seq1  CAGAAATAAATACAACGTGTTAAATTCTTTTAGAAATGGTGGTATTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATAAATACAACGTGTTAAATTCTTTTAGAAATGGTGGTATTAAGA  750

seq1  ATGATTTTAAAACGTAAGACTGATTACTTCCTTTTATCATTCTCTAGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTAAAACGTAAGACTGATTACTTCCTTTTATCATTCTCTAGCTA  800

seq1  AAAGCTTTGCCTTGACGCCTCTCTACTGTAAAAGGTGACTGGAATGTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTTGCCTTGACGCCTCTCTACTGTAAAAGGTGACTGGAATGTTTC  850

seq1  CAAACATTCTCAAACCACCTGAAATTATCAGTAACTTTCCCTGACTCTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATTCTCAAACCACCTGAAATTATCAGTAACTTTCCCTGACTCTAT  900

seq1  TTCCCACAACAGCGACATGACCCTCCCCCATGCCCCCCAATGTCTGAAAC  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTCCCACAACAGCGACATGACCCTCCCCCATG-CCCCCAATGTCTGAAAC  949

seq1  ATGACTCAGCACCTCTTCCACACAATCTCTTTCCAAACCAGTCAACTCAT  1000
      ||||||||||| ||| ||||||| ||||||||||||||||||||||||| 
seq2  ATGACTCAGCA-CTC-TCCACAC-ATCTCTTTCCAAACCAGTCAACTCA-  995

seq1  TTTTCTCCAACATGGCAGACGC-TTTCTCCACCAAGTGATTTCCTGCTTC  1049
      |||||| ||||||||||||||| |||||||||| ||||| ||||||||| 
seq2  TTTTCT-CAACATGGCAGACGCTTTTCTCCACC-AGTGA-TTCCTGCTT-  1041

seq1  CTTATCTGAAACTCAATTTTTCTAATCTTAGATTATGTGTCCTATTCCTA  1099
      |||||||||||||||| |||||||||| |||||  ||| || |||  |||
seq2  CTTATCTGAAACTCAA-TTTTCTAATC-TAGATATTGTTTCTTAT--CTA  1087

seq1  GTCTTCAAGATTCAATTTAAAACTAACCTTGTCTGAGTCCATGGCTTT-G  1148
      |  ||| ||||||||||   |||||    |||||||   ||||||||| |
seq2  GGTTTC-AGATTCAATT--GAACTA---CTGTCTGA--TCATGGCTTTGG  1129

seq1  AGGGATCTCTGATCTCTAA  1167
      |||||   |||||||||||
seq2  AGGGAATCCTGATCTCTAA  1148