BAC Information

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BAC

Clone NameB6Ng01-051H13
Chromosome16 (Build37)
Map Location 32,077,114 - 32,109,631
singlet/doubletdoublet
Overlap genePak2, Pigx, 1500031L02Rik
Upstream geneAI480653, Centb2, Ppp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5
Downstream geneLrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051H13.bB6Ng01-051H13.g
ACCDH875103DH875104
length5151,130
definitionDH875103|Mus musculus domesticus DNA, BAC clone: B6Ng01-051H13, 5' end.DH875104|Mus musculus domesticus DNA, BAC clone: B6Ng01-051H13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,109,117 - 32,109,631)(32,077,114 - 32,078,256)
sequence
gaattcttggctttggttgaaatttccttctaagccaataggcatataac
caagttatatttggctgcaattaacaaggtcatggacaatgaggaattag
caatcaaatatgctaatgtaagaattctcaccctaaaaactcaaagtttc
ctaagtcaggtgtccacgaaataaggagcattcattttacctgaagaaca
ctcctcctgtcttgaacatgtactatcaatggagaccattacagaatact
tgaaattcaccaaaaacaaaacaacagcaacaacaacccctagaaaatct
agagaaaatggatacatcctaagatatacataacaaatgcttctattaga
cctacctgctggcaaggctttgaagcattttctcgattgatgattaatgc
aggagggcccctcccagtgtgagtgggaccagctctgggcaggtgtcctg
ggctgtataaaaaaggaagctgaagcctggtagtggtggaaacagcggtg
gtggtggtggtggtg
gaattctctttttaaaaacatgtctgcttgcccaacacaatggtaatctc
actggctaggattctgacgcagatcttaagtccagaagtttgaaacaaac
ctgggtatcatagaaagaggctgtctccaaagaaaaacaaacaaatacct
gcttttggaaacaaatgagatattctgcaggcacaggcttgcaatcccag
ctactagggaggttgagaagaaaaccccagttcaaggcttacctggtagg
gaagagattcaataccagcctgggaaacagtgagactgtctgcacagaga
agagagggctgggcttgtaactcagtgctgcaaagaacacttgcctagca
tcacagggaggtctgcggttcaatccggtacaaggggttaaaaaggagaa
agaaacagcagaaactaacttcaaggtactttttcattccctgacattcc
tccctagtgtcaagacaactcactaacctaagaacaacccacagtaccaa
aggatggcagtacttgatactaatccatttcccccatagcctggcagagg
gaaaggtaataatgtactagtgaaaacaagaagaaaacatttttaatttt
gggcaacctcttttaccaaaacccaaaagttacattttctatctatctaa
gcaacaatataaaattcagtttccctgatgtaaatgtacaatagtgttcc
tggctaattaatctctagaaagacctaaaaagagaggctaccaaatatgt
tggctaacacgtgtaatcccagcacacaaaggctgagacaggaagagtgt
cacaacagcctgagctggaatgaggccctgtctaggaaaggcagagggat
gggtataaaagtatacgaaaaaggcttcctttcacacacacacacacaca
cccaactgaagaactggggtagagacaagcaagaatgttctacaaatgcc
acagagcttctggcaaagtgacgtgccctaacctgtttaaaatactactc
actgctttcatcccaacctatttatctactatctttggatagcctcaacc
aaaaaaaaaaaataaaaaatctctgagcaaattctttgtgtattaatttc
atatctgctacttatagagcgaagagtcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32109117_32109631
seq2: B6Ng01-051H13.b_40_554 (reverse)

seq1  CACCACCACCACCACCACCGCTGTTTCCACCACTACCAGGCTTCAGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCACCACCACCACCGCTGTTTCCACCACTACCAGGCTTCAGCTTC  50

seq1  CTTTTTTATACAGCCCAGGACACCTGCCCAGAGCTGGTCCCACTCACACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTATACAGCCCAGGACACCTGCCCAGAGCTGGTCCCACTCACACT  100

seq1  GGGAGGGGCCCTCCTGCATTAATCATCAATCGAGAAAATGCTTCAAAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGGCCCTCCTGCATTAATCATCAATCGAGAAAATGCTTCAAAGCC  150

seq1  TTGCCAGCAGGTAGGTCTAATAGAAGCATTTGTTATGTATATCTTAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGCAGGTAGGTCTAATAGAAGCATTTGTTATGTATATCTTAGGAT  200

seq1  GTATCCATTTTCTCTAGATTTTCTAGGGGTTGTTGTTGCTGTTGTTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCATTTTCTCTAGATTTTCTAGGGGTTGTTGTTGCTGTTGTTTTGT  250

seq1  TTTTGGTGAATTTCAAGTATTCTGTAATGGTCTCCATTGATAGTACATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTGAATTTCAAGTATTCTGTAATGGTCTCCATTGATAGTACATGT  300

seq1  TCAAGACAGGAGGAGTGTTCTTCAGGTAAAATGAATGCTCCTTATTTCGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACAGGAGGAGTGTTCTTCAGGTAAAATGAATGCTCCTTATTTCGT  350

seq1  GGACACCTGACTTAGGAAACTTTGAGTTTTTAGGGTGAGAATTCTTACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCTGACTTAGGAAACTTTGAGTTTTTAGGGTGAGAATTCTTACAT  400

seq1  TAGCATATTTGATTGCTAATTCCTCATTGTCCATGACCTTGTTAATTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATATTTGATTGCTAATTCCTCATTGTCCATGACCTTGTTAATTGCA  450

seq1  GCCAAATATAACTTGGTTATATGCCTATTGGCTTAGAAGGAAATTTCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATATAACTTGGTTATATGCCTATTGGCTTAGAAGGAAATTTCAAC  500

seq1  CAAAGCCAAGAATTC  515
      |||||||||||||||
seq2  CAAAGCCAAGAATTC  515

seq1: chr16_32077114_32078256
seq2: B6Ng01-051H13.g_68_1197

seq1  GAATTCTCTTTTTAAAAACATGTCTGCTTGCCCAACACAATGGTAATCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTTTAAAAACATGTCTGCTTGCCCAACACAATGGTAATCTC  50

seq1  ACTGGCTAGGATTCTGACGCAGATCTTAAGTCCAGAAGTTTGAAACAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTAGGATTCTGACGCAGATCTTAAGTCCAGAAGTTTGAAACAAAC  100

seq1  CTGGGTATCATAGAAAGAGGCTGTCTCCAAAGAAAAACAAACAAATACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTATCATAGAAAGAGGCTGTCTCCAAAGAAAAACAAACAAATACCT  150

seq1  GCTTTTGGAAACAAATGAGATATTCTGCAGGCACAGGCTTGCAATCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGGAAACAAATGAGATATTCTGCAGGCACAGGCTTGCAATCCCAG  200

seq1  CTACTAGGGAGGTTGAGAAGAAAACCCCAGTTCAAGGCTTACCTGGTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGGGAGGTTGAGAAGAAAACCCCAGTTCAAGGCTTACCTGGTAGG  250

seq1  GAAGAGATTCAATACCAGCCTGGGAAACAGTGAGACTGTCTGCACAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGATTCAATACCAGCCTGGGAAACAGTGAGACTGTCTGCACAGAGA  300

seq1  AGAGAGGGCTGGGCTTGTAACTCAGTGCTGCAAAGAACACTTGCCTAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGGCTGGGCTTGTAACTCAGTGCTGCAAAGAACACTTGCCTAGCA  350

seq1  TCACAGGGAGGTCTGCGGTTCAATCCGGTACAAGGGGTTAAAAAGGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGGAGGTCTGCGGTTCAATCCGGTACAAGGGGTTAAAAAGGAGAA  400

seq1  AGAAACAGCAGAAACTAACTTCAAGGTACTTTTTCATTCCCTGACATTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAGCAGAAACTAACTTCAAGGTACTTTTTCATTCCCTGACATTCC  450

seq1  TCCCTAGTGTCAAGACAACTCACTAACCTAAGAACAACCCACAGTACCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGTGTCAAGACAACTCACTAACCTAAGAACAACCCACAGTACCAA  500

seq1  AGGATGGCAGTACTTGATACTAATCCATTTCCCCCATAGCCTGGCAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGGCAGTACTTGATACTAATCCATTTCCCCCATAGCCTGGCAGAGG  550

seq1  GAAAGGTAATAATGTACTAGTGAAAACAAGAAGAAAACATTTTTAATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTAATAATGTACTAGTGAAAACAAGAAGAAAACATTTTTAATTTT  600

seq1  GGGCAACCTCTTTTACCAAAACCCAAAAGTTACATTTTCTATCTATCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAACCTCTTTTACCAAAACCCAAAAGTTACATTTTCTATCTATCTAA  650

seq1  GCAACAATATAAAATTCAGTTTCCCTGATGTAAATGTACAATAGTGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAATATAAAATTCAGTTTCCCTGATGTAAATGTACAATAGTGTTCC  700

seq1  TGGCTAATTAATCTCTAGAAAGACCTAAAAAGAGAGGCTACCAAATATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAATTAATCTCTAGAAAGACCTAAAAAGAGAGGCTACCAAATATGT  750

seq1  TGGCTAACACGTGTAATCCCAGCACAC-AAGGCTGAGACAGGAAGAGTGT  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGGCTAACACGTGTAATCCCAGCACACAAAGGCTGAGACAGGAAGAGTGT  800

seq1  CACAACAGCCTGAGCTGGAATGAGGCCCTGTCTAGGAAAGGCAGA-GGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CACAACAGCCTGAGCTGGAATGAGGCCCTGTCTAGGAAAGGCAGAGGGAT  850

seq1  GGGTATAAAAGTATACGAAAAAGGCTTCC-TTCACACACACACACACACA  897
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGGTATAAAAGTATACGAAAAAGGCTTCCTTTCACACACACACACACACA  900

seq1  CCCCAACTGAAGAACTGGGGTAGAGACAAGCAAGAATGTTCTACAAATGC  947
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CCCAACTGAAGAACTGGGGTAGAGACAAGCAAGAATGTTCTACAAATGC  949

seq1  CACAGAGCTTCTGGCAAAGTTGACGTGCCCTAACCTGTTTTAAAAATTAC  997
      ||||||||||||||||||| ||||||||||||||||||||   ||| |||
seq2  CACAGAGCTTCTGGCAAAG-TGACGTGCCCTAACCTGTTT---AAAATAC  995

seq1  TACTCACTGCCTTCATCCCAACCTAATTTTATTCATACTATTCTTTTGGA  1047
      |||||||||| ||||||||||||||  |||||   ||||||   ||||||
seq2  TACTCACTGCTTTCATCCCAACCTA--TTTAT--CTACTAT--CTTTGGA  1039

seq1  TAG-CTCTACCAAAAAAAAAAAAAAAAAAATCCCCAGAGCAAATTC-TTG  1095
      ||| ||| ||||||||||||||| ||||||| | | |||||||||| |||
seq2  TAGCCTCAACCAAAAAAAAAAAATAAAAAAT-CTCTGAGCAAATTCTTTG  1088

seq1  TGTATTTATTTCAATATCCTGCCTACTTTATAAGAGCGGAAGAGTCGA  1143
      |||||| ||||| |||| ||| |||| |||| ||||| ||||||||||
seq2  TGTATTAATTTC-ATAT-CTG-CTAC-TTAT-AGAGC-GAAGAGTCGA  1130