BAC Information

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BAC

Clone NameB6Ng01-051M14
Chromosome16 (Build37)
Map Location 50,616,871 - 50,731,010
singlet/doubletdoublet
Overlap geneLOC672778, 5330426P16Rik
Upstream geneIft57, LOC667796, LOC100043767, Cd47, EG433024, LOC100043769, LOC628951, EG224180, EG667802, LOC100043404, Bbx, LOC100043414, Ccdc54
Downstream geneEG639820, LOC627543
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051M14.bB6Ng01-051M14.g
ACCDH875325DH875326
length1,106820
definitionDH875325|Mus musculus domesticus DNA, BAC clone: B6Ng01-051M14, 5' end.DH875326|Mus musculus domesticus DNA, BAC clone: B6Ng01-051M14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,616,871 - 50,617,991)(50,730,191 - 50,731,010)
sequence
gaattcaagactaccatacattcgatcatatgctgagcagaacagctaaa
tgaaaaataagatcacatgagggtgaaagaaagaaactgggtcattcata
cattcctgatggcgatacaaattggcatagccactccaggaaattgctta
gcattacttacagaactgagcacgggatgtggtattacacatttatggat
tgttctcttgagctattttatagataaacgagaacttacatttgaagata
aaactccataaaatatacatacgtggtaggaactgatgacagaagttgca
ttacttagttcacctaaagtcaacatctggcctctacacactgtgtgcac
atatctttggacccagaaataccagacatgcctccctactatacacacta
catacacgtatgtaagattgatagtgaaattttgtgttttactccaataa
atgtaaacaaagccttttacataagttagggcttaatcaccacaaactct
tttttattagatattttctttatttacatttcaaatgttatcccctttcc
taatttctcctctgaaaatcccttatcccctccccctgctccccaaccca
cccactcctgcttcctggctctggcattctcctatacaggggaatagaac
cttcacaggaccaacagcctctcctcccattgatgaccgactaggccatc
ctctgctacatatgcagccagagccatgagtcccatcacttcctccaaca
aggccatacctcctctaacaaggccacacttccaaatagtgacacttcct
gggccaatcatgttcaaaccaccacaggcatatttttaattcagtgaggg
atttctattcagagtgagcaatgagcctcaagcttcacgtctactgttct
actgtattcgtattagcattgcactaaaaacagaagattgcttgtcttta
gcacttctacttaacattatatttcaatcccattatcgtggggaaactac
aagaaagaagaaaagcacaaggggttattttaatagcaacacgataggca
ggggatactagtaccattacaaaaaaaatcactatgaaacattacatctt
atcaaa
gaattctcagtattccaccttccccaacatccggtggttgtatagtgtta
atttacaaaaacctctgttaactgatggcagaatcatgccattattaacc
actaatatatcctctttagtaaagggctcttcagctgtgtctattgattg
ccagtcacacttgacttcaaacttataaattctgactgtgctccaccacc
aaatgcatttttctcctctgcagtttgtattttaactctctcactgttag
attattataaatgtgtagttccccccccccccggtaaattgagtaccttg
gctaagctataaataatcatttcctacccacaaggtcacaagaatgttca
cctatagcatcctcttatgtgtgagtgtttgatgtactacctacaattaa
tttgagggaatctcgtgtaagagtctttttaatttgattacccaattgac
ctaaatcttccttttaaagtggaaacttcttctctcacaattctacgcta
tcaccttgatcacaaatcaaaagaaacagatttctagaggctgggatttg
tagaaaaggaacatggaataccacaccaagtagcgtaaacagttttgcta
agggttgatctcataggtgaaggcagagaatttcaagagaaacacagata
atctggaaagaatggaatggaaatgctagaactgaggaaaataactggag
ccatcggaggttatcaagagagttggtacacagggcatacttgactaaac
ttagaatttttctgaagttaatgtgtattgaaaaaatgttgttgttgttg
ttttggtggtggtggtggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_50616871_50617991
seq2: B6Ng01-051M14.b_48_1153

seq1  GAATTCAAGACTACCATACATTCGATCATATGCTGAGCAGAACAGCTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGACTACCATACATTCGATCATATGCTGAGCAGAACAGCTAAA  50

seq1  TGAAAAATAAGATCACATGAGGGTGAAAGAAAGAAACTGGGTCATTCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATAAGATCACATGAGGGTGAAAGAAAGAAACTGGGTCATTCATA  100

seq1  CATTCCTGATGGCGATACAAATTGGCATAGCCACTCCAGGAAATTGCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTGATGGCGATACAAATTGGCATAGCCACTCCAGGAAATTGCTTA  150

seq1  GCATTACTTACAGAACTGAGCACGGGATGTGGTATTACACATTTATGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTACTTACAGAACTGAGCACGGGATGTGGTATTACACATTTATGGAT  200

seq1  TGTTCTCTTGAGCTATTTTATAGATAAACGAGAACTTACATTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCTTGAGCTATTTTATAGATAAACGAGAACTTACATTTGAAGATA  250

seq1  AAACTCCATAAAATATACATACGTGGTAGGAACTGATGACAGAAGTTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCATAAAATATACATACGTGGTAGGAACTGATGACAGAAGTTGCA  300

seq1  TTACTTAGTTCACCTAAAGTCAACATCTGGCCTCTACACACTGTGTGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTAGTTCACCTAAAGTCAACATCTGGCCTCTACACACTGTGTGCAC  350

seq1  ATATCTTTGGACCCAGAAATACCAGACATGCCTCCCTACTATACACACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTTGGACCCAGAAATACCAGACATGCCTCCCTACTATACACACTA  400

seq1  CATACACGTATGTAAGATTGATAGTGAAATTTTGTGTTTTACTCCAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACGTATGTAAGATTGATAGTGAAATTTTGTGTTTTACTCCAATAA  450

seq1  ATGTAAACAAAGCCTTTTACATAAGTTAGGGCTTAATCACCACAAACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAACAAAGCCTTTTACATAAGTTAGGGCTTAATCACCACAAACTCT  500

seq1  TTTTTATTAGATATTTTCTTTATTTACATTTCAAATGTTATCCCCTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTAGATATTTTCTTTATTTACATTTCAAATGTTATCCCCTTTCC  550

seq1  TAATTTCTCCTCTGAAAATCCCTTATCCCCTCCCCCTGCTCCCCAACCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCTCCTCTGAAAATCCCTTATCCCCTCCCCCTGCTCCCCAACCCA  600

seq1  CCCACTCCTGCTTCCTGGCTCTGGCATTCTCCTATACAGGGGAATAGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCTGCTTCCTGGCTCTGGCATTCTCCTATACAGGGGAATAGAAC  650

seq1  CTTCACAGGACCAACAGCCTCTCCTCCCATTGATGACCGACTAGGCCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAGGACCAACAGCCTCTCCTCCCATTGATGACCGACTAGGCCATC  700

seq1  CTCTGCTACATATGCAGCCAGAGCCATGAGTCCCATCACTTCCTCCAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTACATATGCAGCCAGAGCCATGAGTCCCATCACTTCCTCCAACA  750

seq1  AGGCCATACCTCCTCTAACAAGGCCACACTTCCAAATAGTGACACTTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATACCTCCTCTAACAAGGCCACACTTCCAAATAGTGACACTTCCT  800

seq1  GGGCCAATCATGTTCAAACCACCACAGGCATATTTTTAATTCAGTGAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAATCATGTTCAAACCACCACAGGCATATTTTTAATTCAGTGAGGG  850

seq1  ATTTCTATTCAGAGTGAGCAATGAGCCTCAAGCTTCACGTCTACTGTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTATTCAGAGTGAGCAATGAGCCTCAAGCTTCACGTCTACTGTTCT  900

seq1  ACTGTATTCGTATTAGCATTGCACTAAAAACAGGAAGATTGCTTGTCTTT  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTGTATTCGTATTAGCATTGCACTAAAAACA-GAAGATTGCTTGTCTTT  949

seq1  AGCACTTCTACTTAACATTATATTTCAAATCCCATTATCGT-GGGAAACT  999
      |||||||||||||||||||||||||| |||||||||||||| ||||||||
seq2  AGCACTTCTACTTAACATTATATTTC-AATCCCATTATCGTGGGGAAACT  998

seq1  ACAAGAAAGAAAGAAAAAGCACAAGGTGTTATTTTTAATAGCAACACGAT  1049
      |||||||||||   |||||||||||| |||| ||||||||||||||||||
seq2  ACAAGAAAGAA--GAAAAGCACAAGGGGTTA-TTTTAATAGCAACACGAT  1045

seq1  AGGCAGGGGATACTAGTTACCAATTAACAAAAAAAATATCAACCTATGAA  1099
      |||||||||||||||| |||||  | |||||||||  ||||  ||||| |
seq2  AGGCAGGGGATACTAG-TACCA--TTACAAAAAAA--ATCA--CTATG-A  1087

seq1  AACATTTAACATCTTTATCAAA  1121
      ||||||  ||||| ||||||||
seq2  AACATT--ACATC-TTATCAAA  1106

seq1: chr16_50730191_50731010
seq2: B6Ng01-051M14.g_65_884 (reverse)

seq1  CACCACCACCACCACCAAAACAACAACAACAACATTTTTTCAATACACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCACCACCACCAAAACAACAACAACAACATTTTTTCAATACACAT  50

seq1  TAACTTCAGAAAAATTCTAAGTTTAGTCAAGTATGCCCTGTGTACCAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCAGAAAAATTCTAAGTTTAGTCAAGTATGCCCTGTGTACCAACT  100

seq1  CTCTTGATAACCTCCGATGGCTCCAGTTATTTTCCTCAGTTCTAGCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGATAACCTCCGATGGCTCCAGTTATTTTCCTCAGTTCTAGCATTT  150

seq1  CCATTCCATTCTTTCCAGATTATCTGTGTTTCTCTTGAAATTCTCTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCATTCTTTCCAGATTATCTGTGTTTCTCTTGAAATTCTCTGCCT  200

seq1  TCACCTATGAGATCAACCCTTAGCAAAACTGTTTACGCTACTTGGTGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTATGAGATCAACCCTTAGCAAAACTGTTTACGCTACTTGGTGTGG  250

seq1  TATTCCATGTTCCTTTTCTACAAATCCCAGCCTCTAGAAATCTGTTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCATGTTCCTTTTCTACAAATCCCAGCCTCTAGAAATCTGTTTCTT  300

seq1  TTGATTTGTGATCAAGGTGATAGCGTAGAATTGTGAGAGAAGAAGTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTGTGATCAAGGTGATAGCGTAGAATTGTGAGAGAAGAAGTTTCC  350

seq1  ACTTTAAAAGGAAGATTTAGGTCAATTGGGTAATCAAATTAAAAAGACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAAAGGAAGATTTAGGTCAATTGGGTAATCAAATTAAAAAGACTC  400

seq1  TTACACGAGATTCCCTCAAATTAATTGTAGGTAGTACATCAAACACTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACGAGATTCCCTCAAATTAATTGTAGGTAGTACATCAAACACTCAC  450

seq1  ACATAAGAGGATGCTATAGGTGAACATTCTTGTGACCTTGTGGGTAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGAGGATGCTATAGGTGAACATTCTTGTGACCTTGTGGGTAGGAA  500

seq1  ATGATTATTTATAGCTTAGCCAAGGTACTCAATTTACCGGGGGGGGGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTATTTATAGCTTAGCCAAGGTACTCAATTTACCGGGGGGGGGGGG  550

seq1  AACTACACATTTATAATAATCTAACAGTGAGAGAGTTAAAATACAAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACACATTTATAATAATCTAACAGTGAGAGAGTTAAAATACAAACTG  600

seq1  CAGAGGAGAAAAATGCATTTGGTGGTGGAGCACAGTCAGAATTTATAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAGAAAAATGCATTTGGTGGTGGAGCACAGTCAGAATTTATAAGT  650

seq1  TTGAAGTCAAGTGTGACTGGCAATCAATAGACACAGCTGAAGAGCCCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTCAAGTGTGACTGGCAATCAATAGACACAGCTGAAGAGCCCTTT  700

seq1  ACTAAAGAGGATATATTAGTGGTTAATAATGGCATGATTCTGCCATCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAGAGGATATATTAGTGGTTAATAATGGCATGATTCTGCCATCAGT  750

seq1  TAACAGAGGTTTTTGTAAATTAACACTATACAACCACCGGATGTTGGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGAGGTTTTTGTAAATTAACACTATACAACCACCGGATGTTGGGGA  800

seq1  AGGTGGAATACTGAGAATTC  820
      ||||||||||||||||||||
seq2  AGGTGGAATACTGAGAATTC  820