BAC Information

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BAC

Clone NameB6Ng01-053G21
Chromosome16 (Build37)
Map Location 25,586,674 - 25,587,374
singlet/doubletsinglet
Overlap genenone
Upstream geneLpp, 5430420C16Rik
Downstream geneTrp63, LOC100043571, Leprel1, Cldn1, Cldn16, LOC100043057, Il1rap
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053G21.bB6Ng01-053G21.g
ACCDH876477DH876478
length7841,200
definitionDH876477|Mus musculus domesticus DNA, BAC clone: B6Ng01-053G21, 5' end.DH876478|Mus musculus domesticus DNA, BAC clone: B6Ng01-053G21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcattagagtgccataagagtctcagaaacccagtggacaagc
acctcctgaccagaggtttgcagattttaccttgcatcaaaaccagcaga
aaggcttcaagaaactcgtttcaggccctgccctcaacaggggtttttgt
caatatagcctgccaatttgtacttctcttgtgttctttttattaattta
ttcatttctttttattcatatatttgtttacatttcaagtgatatcctcc
ttcctagttacccctccaccaaccctgccatcccatctctgctcttcccc
atcccctttgcctctgcaagggtgctcctccacctattcacccactcctg
cctcatccttctagcatccccctacagtggggcatcaagtgtccctcccc
tcccattaatgtcagataaggatgtcctgtgctacatatgtatctagagt
cctggctccctccatgtataccttttggttggtggtttagtgactgggag
ctctgggtgttccagttaatttggttcacaggttggctgtgaatatctgc
atctgtatttggtcaggtgctgatagaccctcttgggggaatggccatat
caggctcctgtcagccagcacttcttggcatcagcaatagtgtgagagtg
tggtgtctgcagatgggatggatctctagatggggcggtctctggatgga
ctttcccttcagtctctgttccatttttttgtccttgtctttccttaaag
ttgctgctgctgcccaagaagcactcttttgaaa
gaattccagaaaaacacaaccaagcaggtgaaggaattgatcaaaaccaa
tcaggatctaaaagtggaaatagaaacaataaagaaatcacaaaggaaaa
caatcctgaagatggaaaacctatcaaagagatcaggcgtcataaatgta
agcattaccaacagaattcaagagctagcagagagaagaatatcaggtgc
agaagatgccacagaaaacattgacacaatggtcaaagaaaatgcaaaat
gcaaaaagttcctaaccccaaacaaccaggaaatccaggacacaatgaga
tgaccaaacctaaggataacaggtatagaagagagtgaagattcccaatt
taaagggccagtaaatatcttcaacaaaattatagaagaaaacttcccaa
gcctaaagaaagagatgcccataaacatacaagaggcctacagaattcca
aatagattgaaccagaaaagaacgtcttcccatcatgtaattgtcaaaac
accaaatgtacatattgaaactaacagaagttatggaccaaaaggattta
tcagatatctatagaacatttcatcctaaaacaaaagaatataccttttt
ctcagaacctcatggtaccttctcaaaatttaccatatagttggtcacaa
gacaggtacaagaagactgaaataatcccatgcatccaccacggactatg
gctggtcttgaacaccaactaaaacaacagaaagcccatatatacatggg
aagctgagcaatgccctactcagtgataacttggtcaaggaagaaataaa
gaaagaaattaaagactttttagcattaatgaaattgaaggcacaacgta
ctgaaacttatgggacacattgaaagaatgctaggagtgcctccaaaatg
caactggagagagcatccactagcagcttacagcacacctgaaaaaatgg
agcgaatataccagagtagtagtggcggaaataatcaactcatggctgaa
tcaccagtaaaacaaaagacttatcaaggatcaacaatcggagctggttc
tttgagaaatccacaagtagatgacacttatccagacatgcctcgaagat
tagaacatgtttcatattacatatctgattgtagatagtcagacacacct
tcgataccaggaattaaacagtcaaaccatatagatatacacagacacct

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_25586674_25587374
seq2: B6Ng01-053G21.b_44_746

seq1  GAATTCATCATTAGAGTGCCATAAGAGTCTCAGAAACCCAGTGGACAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATTAGAGTGCCATAAGAGTCTCAGAAACCCAGTGGACAAGC  50

seq1  ACCTCCTGACCAGAGGTTTGCAGATTTTACCTTGCATCAAAACCAGCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTGACCAGAGGTTTGCAGATTTTACCTTGCATCAAAACCAGCAGA  100

seq1  AAGGCTTCAAGAAACTCGTTTCAGGCCCTGCCCTCAACAGGGGTTTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTCAAGAAACTCGTTTCAGGCCCTGCCCTCAACAGGGGTTTTTGT  150

seq1  CAATATAGCCTGCCAATTTGTACTTCTCTTGTGTTCTTTTTATTAATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATAGCCTGCCAATTTGTACTTCTCTTGTGTTCTTTTTATTAATTTA  200

seq1  TTCATTTCTTTTTATTCATATATTTGTTTACATTTCAAGTGATATCCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCTTTTTATTCATATATTTGTTTACATTTCAAGTGATATCCTCC  250

seq1  TTCCTAGTTACCCCTCCACCAACCCTGCCATCCCATCTCTGCTCTTCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGTTACCCCTCCACCAACCCTGCCATCCCATCTCTGCTCTTCCCC  300

seq1  ATCCCCTTTGCCTCTGCAAGGGTGCTCCTCCACCTATTCACCCACTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTTTGCCTCTGCAAGGGTGCTCCTCCACCTATTCACCCACTCCTG  350

seq1  CCTCATCCTTCTAGCATCCCCCTACAGTGGGGCATCAAGTGTCCCTCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCCTTCTAGCATCCCCCTACAGTGGGGCATCAAGTGTCCCTCCCC  400

seq1  TCCCATTAATGTCAGATAAGGATGTCCTGTGCTACATATGTATCTAGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTAATGTCAGATAAGGATGTCCTGTGCTACATATGTATCTAGAGT  450

seq1  CCTGGCTCCCTCCATGTATACCTTTTGGTTGGTGGTTTAGTGACTGGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTCCCTCCATGTATACCTTTTGGTTGGTGGTTTAGTGACTGGGAG  500

seq1  CTCTGGGTGTTCCAGTTAA-TTGGTTCACAGGTTGGCTGTGAATATCTGC  549
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTCTGGGTGTTCCAGTTAATTTGGTTCACAGGTTGGCTGTGAATATCTGC  550

seq1  ATCTGTA-TTGGTCAGGTGCTGATAGACCCTCTTGGGGGAATGGCCATAT  598
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTATTTGGTCAGGTGCTGATAGACCCTCTTGGGGGAATGGCCATAT  600

seq1  CAGGCTCCTGTCAGCCAGCACTTCTTGGCATCAGCAATAGTGTGAGAGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCCTGTCAGCCAGCACTTCTTGGCATCAGCAATAGTGTGAGAGTG  650

seq1  TGGTGTCTGCAGATGGGATGGATCTCTAGATGGGGCGGTCTCTGGATGGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTCTGCAGATGGGATGGATCTCTAGATGGGGCGGTCTCTGGATGGA  700

seq1  CTT  701
      |||
seq2  CTT  703