BAC Information

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BAC

Clone NameB6Ng01-053K18
Chromosome16 (Build37)
Map Location 68,162,059 - 68,162,975
singlet/doubletsinglet
Overlap genenone
Upstream geneCadm2, 9330155M09Rik
Downstream geneEG626609
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053K18.bB6Ng01-053K18.g
ACCDH876655DH876656
length1,042915
definitionDH876655|Mus musculus domesticus DNA, BAC clone: B6Ng01-053K18, 5' end.DH876656|Mus musculus domesticus DNA, BAC clone: B6Ng01-053K18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaatagttgaactgcaaagagcagagaaatcttaaagaaatgt
tcaatttcctttgccatcagtgatatacaaatcaaaactactttgaaaat
ctatcttacaggtaccaggatgtttaagatcaacaacataattaacagct
catgctgtcatggatgtagtgcacttgtaacacatccccattgctgcagg
gagtgcaaactactacaaccactaagaaaatcactatggttgttcttcag
aaaattaagactcaatctaccttaagatccatctataccactcttgtaca
tataaccaaaggatgcccagcctaccataaagaaatttgctcaattatgt
tcataacagccagaaactggaaacaacctggatgtccctcaacaagaata
gataaagaaattgatatatattttcacaatggagtattacttagctgtta
gaaaaaaaaaatatcctttaaagttgcagacaaatagatggaactggaaa
aaaaaatcatcctgagagagctaacctagactcagaaagataaaaatagc
atatactcagttatatgcatatatcagatgttaagtaacagatagctatg
gaactatccacaaaaccaaggaagctaagcaaaaaggagggccctatgga
ggacagatagacttacgtggaaggggtaataaaacaggttttgtgaactc
tgagtaagtgtggatggaaatagaaggaatccggtgtggagggagggata
aaggaaagaatactgaaatagatgatttaaattggtagtaatttattgtg
gaaacctagtgtagtagacacttacagcaactaagagggtgactttagta
agggcttctagtaatggagaatatggatcctacaccagccatctactgta
aactagcaagtttctactggtcatactgagacaccagttcagcaaaaacc
ttctacaatacccttcttgctacagtcttgttggctccataactctgcaa
tttgactctgaacctgtatctcttggtgccataaaacccctt
gaattcataaatgaaagttaattcttgtgatggaaaactgaggatgatct
ggaagaaaagacaaatattaaataactaccaaacaaatatctgaggattg
gatactcagtacaataaatgtacatttatgttaactgaattacaagtcca
tcattacagaattgctaaatatttcctcaaattttgttataatattgtaa
aatgcaaaaaacaatgtttcatatgccatttctgaaaactctcatttctc
ataagttctaaaatgttattttatgatttatttaaattttcatttaaaag
tttatttatttaacgttttattcatttagacttttatattaatgatattt
tatgtcttatgtggaattttattttatgaattatgagatgaaatatcatg
ttcttacccatgtgtgttcttgctttccttttttaatcttgaggttgatt
cattctcttttattctgatattttcccaacattgattcagtgatgagtaa
tttgatggtgagtcagggaccttcatcgtggttcagagttatctttatca
gagcacatctttctccaagatctcttccatgaacagtaggactctaactt
ccagttattcaaaaagacaggaaaggaagaatgggaacttcctgtttttc
ttctctagatttctgcatgacaaacaaatgtcaggcactgaggttttgtc
tgccttcgcctatctattttctactgacccagaaatgcaaatctgttttt
ccacttttgactaaatgcctacacacccattgacttttttgtattagtgt
ttattatgttaatacattattagattgtacattttatacatgtatgccaa
acattattgtcaagttgtcccattacattcattttcctctccacttctac
aacatcttctagatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_68162059_68162975
seq2: B6Ng01-053K18.g_70_984

seq1  GAATTCATAAATGAAAGTTAATTCTTGTGATGGAAAACTGAGGATGATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAATGAAAGTTAATTCTTGTGATGGAAAACTGAGGATGATCT  50

seq1  GGAAGAAAAGACAAATATTAAATAACTACCAAACAAATATCTGAGGATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAAAGACAAATATTAAATAACTACCAAACAAATATCTGAGGATTG  100

seq1  GATACTCAGTACAATAAATGTACATTTATGTTAACTGAATTACAAGTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCAGTACAATAAATGTACATTTATGTTAACTGAATTACAAGTCCA  150

seq1  TCATTACAGAATTGCTAAATATTTCCTCAAATTTTGTTATAATATTGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACAGAATTGCTAAATATTTCCTCAAATTTTGTTATAATATTGTAA  200

seq1  AATGCAAAAAACAATGTTTCATATGCCATTTCTGAAAACTCTCATTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAAAAACAATGTTTCATATGCCATTTCTGAAAACTCTCATTTCTC  250

seq1  ATAAGTTCTAAAATGTTATTTTATGATTTATTTAAATTTTCATTTAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTTCTAAAATGTTATTTTATGATTTATTTAAATTTTCATTTAAAAG  300

seq1  TTTATTTATTTAACGTTTTATTCATTTAGACTTTTATATTAATGATATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTAACGTTTTATTCATTTAGACTTTTATATTAATGATATTT  350

seq1  TATGTCTTATGTGGAATTTTATTTTATGAATTATGAGATGAAATATCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTATGTGGAATTTTATTTTATGAATTATGAGATGAAATATCATG  400

seq1  TTCTTACCCATGTGTGTTCTTGCTTTCCTTTTTTAATCTTGAGGTTGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACCCATGTGTGTTCTTGCTTTCCTTTTTTAATCTTGAGGTTGATT  450

seq1  CATTCTCTTTTATTCTGATATTTTCCCAACATTGATTCAGTGATGAGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTTTTATTCTGATATTTTCCCAACATTGATTCAGTGATGAGTAA  500

seq1  TTTGATGGTGAGTCAGGGACCTTCATCGTGGTTCAGAGTTATCTTTATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGGTGAGTCAGGGACCTTCATCGTGGTTCAGAGTTATCTTTATCA  550

seq1  GAGCACATCTTTCTCCAAGATCTCTTCCATGAACAGTAGGACTCTAACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACATCTTTCTCCAAGATCTCTTCCATGAACAGTAGGACTCTAACTT  600

seq1  CCAGTTATTCAAAAAGACAGGAAAGGAAGAATGGGAACTTCCTGTTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTATTCAAAAAGACAGGAAAGGAAGAATGGGAACTTCCTGTTTTTC  650

seq1  TTCTCTAGATTTCTGCATGACAAACAAATGTCAGGCACTGAGGTTTTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAGATTTCTGCATGACAAACAAATGTCAGGCACTGAGGTTTTGTC  700

seq1  TGCCTTCGCCTATCTATTTTCTACTGACCCAGAAATGCAAATCTGTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCGCCTATCTATTTTCTACTGACCCAGAAATGCAAATCTGTTTTT  750

seq1  CCAC-TTTGACTAAATGCCTACACACCCATTGAC-TTTTTGTATTAGTGT  798
      |||| ||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCACTTTTGACTAAATGCCTACACACCCATTGACTTTTTTGTATTAGTGT  800

seq1  TTATTATG-TAATACATTATTAGATTGTACATTTTATACATGTATGCCAA  847
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATGTTAATACATTATTAGATTGTACATTTTATACATGTATGCCAA  850

seq1  ACATTATTGTCAAGTTGTCCCATTACATTCTATTTTCCTCTCCAACTTCT  897
      |||||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  ACATTATTGTCAAGTTGTCCCATTACATTC-ATTTTCCTCTCC-ACTTCT  898

seq1  ACTAACATTCTTCTTAGATC  917
      || |||| ||||| ||||||
seq2  AC-AACA-TCTTC-TAGATC  915