BAC Information

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BAC

Clone NameB6Ng01-053L10
Chromosome16 (Build37)
Map Location 79,598,173 - 79,636,900
singlet/doubletdoublet
Overlap genenone
Upstream gene4930570E03Rik, Chodl, Prss7
Downstream geneEG383172, 1700066C05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053L10.bB6Ng01-053L10.g
ACCDH876682DH876683
length1,1031,107
definitionDH876682|Mus musculus domesticus DNA, BAC clone: B6Ng01-053L10, 5' end.DH876683|Mus musculus domesticus DNA, BAC clone: B6Ng01-053L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,598,173 - 79,599,276)(79,635,784 - 79,636,900)
sequence
gaattctcaactgaggaatactgaatggctgagaagcacctgaaaaattg
ttctacatccttaatcatcacagactttttttttttttttctgaagcaaa
aggccaagctggatttcaaagctctagtagaagacatcttgtcattcctt
aggtgacctgatggaagaaagacgtgtctggatcattttgagggaaggta
gagatagatagtggagaggtatatctgatcactgtactggctgcatttgt
gtgtcaagttgacacaacttggagtcatcaaagagaaaggagtctccctt
gaggaaatgcctccatgagattgaactgtaaggcactttctcaattagtg
atcaaggtggggaaggcccagtcctttgtgggtatgatatctctgggatg
ttagttctggtttttggaaaaaaaaaacaaaaacaaaaaacaaaaaacaa
acaaacaaaaaacaaaacaaaacaaaacaagttgagcaagtcaggggaag
caatccagtaagcagcatacctccctggcctctgcatcagctccttcatt
caagttccttccctgtgtgagttcctaccatgacttcctttggtgatgaa
cagcaatgtggagatgtaatctgattaaaccctttactgcccaacttgat
tcttggtcatattttgtgcaggaatacaaaccctgaccaagacaatcaca
ttttattgtatacatgtaggacagttttaagaataaatgaaaaggttaaa
aatagcaaggaagggggctggagagatggctcaccagttaagaacaggga
ttgctcttccagaggtcctgagttcaattcccagaaaccacatggtgact
cagagccatctgtaatgggatctgatcctgtcttttttgtgtgtctggta
ataactacagtgtacctcatatatattaataatagtgagtagtaagtaag
taaataaataaataaataaataaataaattaattttataaaataaaaaga
tataatttattttattcttggagttatatatatattacaaataacctatt
tatttaccggtttataaatttccttttccctaaatatttcagtctctcga
aac
gaattccagataatctgaagctctctcctggcctattctgagggcacaag
gaatacagatggtacacacatctatatggaagcaaaaccttatttcacat
tcaataaaaagaaaatctaaaacaaaagccaaacattcttaatcatacat
atatgcaataagatatatgttttataatgttagaaagtagttatgtatgc
aacctaacaagtaaaattaacatttattaagttaattgattttatgcagt
gactataaagatgtttataacatgttttacatgcaatcattaaattttat
atacttaaaatgcatttcataaagctcaattcaaaactgtataaaacaat
gattatttaaaaaatctatttaattaacaatgatgaaaccaaggtctgaa
ataatgaaaatccaatacagatgaataaaatacaatagtaaataaaaatt
cactacttgtaatatgaatacatgatgctatgaggatttttccaagttgt
tcaattgcattcacataagttttattttaataaaatactgtaattttatt
aatttattaaaatgtaatatggaaaaagaagtgtaatttgccctgatata
tttcaaagtaaaaatctacattgcaaaacaaacaaacaaacaaacaaaca
aaaccacataatattctggaataagaaaaatctggatctagctaaattaa
ccaaaactaagttgaattgtgatatttaatatttcctggtctgaaaattc
acatcaactttgtaaaagggaaagtcagtattacatggaggaaatcaaag
tttaacaagcagtccaataatcctagagctctgtgatgacctcaaccttt
gcagtgtagcatagctacattgttggcaagtgtagcatagctacattttt
catagcaacatagtcaccacaaaatgcacagtagcattagaaggaacaat
atttaaggatgagaaacagggaaccatgaacatccaagcaatgaacctat
ggatttacactaaagagaaaggatcaatgaacaatgtaacagcaggtgtt
aactcccaagattggatggtcagacattagatgcaggaaatgggaaggag
tgagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_79598173_79599276
seq2: B6Ng01-053L10.b_46_1148

seq1  GAATTCTCAACTGAGGAATACTGAATGGCTGAGAAGCACCTGAAAAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAACTGAGGAATACTGAATGGCTGAGAAGCACCTGAAAAATTG  50

seq1  TTCTACATCCTTAATCATCACAGACTTTTTTTTTTTTTTTCTGAAGCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACATCCTTAATCATCACAGACTTTTTTTTTTTTTTTCTGAAGCAAA  100

seq1  AGGCCAAGCTGGATTTCAAAGCTCTAGTAGAAGACATCTTGTCATTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAAGCTGGATTTCAAAGCTCTAGTAGAAGACATCTTGTCATTCCTT  150

seq1  AGGTGACCTGATGGAAGAAAGACGTGTCTGGATCATTTTGAGGGAAGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACCTGATGGAAGAAAGACGTGTCTGGATCATTTTGAGGGAAGGTA  200

seq1  GAGATAGATAGTGGAGAGGTATATCTGATCACTGTACTGGCTGCATTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGATAGTGGAGAGGTATATCTGATCACTGTACTGGCTGCATTTGT  250

seq1  GTGTCAAGTTGACACAACTTGGAGTCATCAAAGAGAAAGGAGTCTCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAAGTTGACACAACTTGGAGTCATCAAAGAGAAAGGAGTCTCCCTT  300

seq1  GAGGAAATGCCTCCATGAGATTGAACTGTAAGGCACTTTCTCAATTAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAATGCCTCCATGAGATTGAACTGTAAGGCACTTTCTCAATTAGTG  350

seq1  ATCAAGGTGGGGAAGGCCCAGTCCTTTGTGGGTATGATATCTCTGGGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGTGGGGAAGGCCCAGTCCTTTGTGGGTATGATATCTCTGGGATG  400

seq1  TTAGTTCTGGTTTTTGGAAAAAAAAAACAAAAACAAAAAACAAAAAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCTGGTTTTTGGAAAAAAAAAACAAAAACAAAAAACAAAAAACAA  450

seq1  ACAAACAAAAAACAAAACAAAACAAAACAAGTTGAGCAAGTCAGGGGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAAAAACAAAACAAAACAAAACAAGTTGAGCAAGTCAGGGGAAG  500

seq1  CAATCCAGTAAGCAGCATACCTCCCTGGCCTCTGCATCAGCTCCTTCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCAGTAAGCAGCATACCTCCCTGGCCTCTGCATCAGCTCCTTCATT  550

seq1  CAAGTTCCTTCCCTGTGTGAGTTCCTACCATGACTTCCTTTGGTGATGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCCTTCCCTGTGTGAGTTCCTACCATGACTTCCTTTGGTGATGAA  600

seq1  CAGCAATGTGGAGATGTAATCTGATTAAACCCTTTACTGCCCAACTTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATGTGGAGATGTAATCTGATTAAACCCTTTACTGCCCAACTTGAT  650

seq1  TCTTGGTCATATTTTGTGCAGGAATACAAACCCTGACCAAGACAATCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTCATATTTTGTGCAGGAATACAAACCCTGACCAAGACAATCACA  700

seq1  TTTTATTGTATACATGTAGGACAGTTTTAAGAATAAATGAAAAGGTTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGTATACATGTAGGACAGTTTTAAGAATAAATGAAAAGGTTAAA  750

seq1  AATAGCAAGGAAGGGGGCTGGAGAGATGGCTCACCAGTTAAGAACAGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCAAGGAAGGGGGCTGGAGAGATGGCTCACCAGTTAAGAACAGGGA  800

seq1  TTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGAAACCACATGGTGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGAAACCACATGGTGACT  850

seq1  CAGAGCCATCTGTAATGGGATCTGATCCTGTC-TTTTTGTGTGTCTGGTA  899
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAGAGCCATCTGTAATGGGATCTGATCCTGTCTTTTTTGTGTGTCTGGTA  900

seq1  ATAACTACAGTGTA-CTCATATATATTAAATAAATAAGTGAGTAAGTAAG  948
      |||||||||||||| |||||||||||| |||||   ||||||| ||||||
seq2  ATAACTACAGTGTACCTCATATATATT-AATAA--TAGTGAGT-AGTAAG  946

seq1  TAAGTAAATAAATAAATAAATAAATAAATAAATAAATTTTATAAAATAAA  998
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TAAGTAAATAAATAAATAAATAAATAAATAAATTAATTTTATAAAATAAA  996

seq1  AAGATATAAATTTATTTTA-TCTTGGAGTTATAATATATATACAAAAATA  1047
      ||||||| ||||||||||| |||||||||||| ||||||||  | |||||
seq2  AAGATAT-AATTTATTTTATTCTTGGAGTTAT-ATATATAT-TACAAATA  1043

seq1  AACTA-TTATTTACGGTTTTATAAAATTTCTTTT-CCTAAATATTTCAGT  1095
      | ||| |||||||| | |||||||| || ||||| |||||||||||||||
seq2  ACCTATTTATTTACCGGTTTATAAATTTCCTTTTCCCTAAATATTTCAGT  1093

seq1  CTC-AGAAAC  1104
      |||  |||||
seq2  CTCTCGAAAC  1103

seq1: chr16_79635784_79636900
seq2: B6Ng01-053L10.g_68_1174 (reverse)

seq1  TGACTCAACTTCCTTCCATTTTCCTGCATCTAATTTGTCTTGACTCATCC  50
      |||||||   |||||||  ||||||||||||||  |||| |||| |||||
seq2  TGACTCA--CTCCTTCCCATTTCCTGCATCTAA--TGTC-TGAC-CATCC  44

seq1  AATC-TGAGAGTTAACACCCTGCTGTTTACATTTGTTCATTGATCCTTTC  99
      |||| || ||||||||| ||||||| ||||| ||||||||||||||||||
seq2  AATCTTGGGAGTTAACA-CCTGCTG-TTACA-TTGTTCATTGATCCTTTC  91

seq1  TCTTTAGTGTAAATCCATAGGTTCATTTGCTTGGATGTTCATGGTTCCCT  149
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCTTTAGTGTAAATCCATAGGTTCA-TTGCTTGGATGTTCATGGTTCCCT  140

seq1  GTTTCTTCATCCTTTAATATTGTTCC-TCTAATGCTACTGTTGCATTTTG  198
      ||||| |||||||| ||||||||||| ||||||||||||| |||||||||
seq2  GTTTC-TCATCCTTAAATATTGTTCCTTCTAATGCTACTG-TGCATTTTG  188

seq1  TGGTGACTATGTTGCTATGAAAAATGTAGCTATGCTACACTTG-CAACAA  247
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGGTGACTATGTTGCTATGAAAAATGTAGCTATGCTACACTTGCCAACAA  238

seq1  TGTAGCTATGCTACACTTGCAAAGGTTGAGGTCATCACAGAGCTCTAGGA  297
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGTAGCTATGCTACAC-TGCAAAGGTTGAGGTCATCACAGAGCTCTAGGA  287

seq1  TTATTGGACTGCTTGTTAAACTTTGATTTCCTCCATGTAATACTGACTTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGACTGCTTGTTAAACTTTGATTTCCTCCATGTAATACTGACTTT  337

seq1  CCCTTTTACAAAGTTGATGTGAATTTTCAGACCAGGAAATATTAAATATC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTACAAAGTTGATGTGAATTTTCAGACCAGGAAATATTAAATATC  387

seq1  ACAATTCAACTTAGTTTTGGTTAATTTAGCTAGATCCAGATTTTTCTTAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCAACTTAGTTTTGGTTAATTTAGCTAGATCCAGATTTTTCTTAT  437

seq1  TCCAGAATATTATGTGGTTTTGTTTGTTTGTTTGTTTGTTTGTTTTGCAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAATATTATGTGGTTTTGTTTGTTTGTTTGTTTGTTTGTTTTGCAA  487

seq1  TGTAGATTTTTACTTTGAAATATATCAGGGCAAATTACACTTCTTTTTCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATTTTTACTTTGAAATATATCAGGGCAAATTACACTTCTTTTTCC  537

seq1  ATATTACATTTTAATAAATTAATAAAATTACAGTATTTTATTAAAATAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACATTTTAATAAATTAATAAAATTACAGTATTTTATTAAAATAAA  587

seq1  ACTTATGTGAATGCAATTGAACAACTTGGAAAAATCCTCATAGCATCATG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATGTGAATGCAATTGAACAACTTGGAAAAATCCTCATAGCATCATG  637

seq1  TATTCATATTACAAGTAGTGAATTTTTATTTACTATTGTATTTTATTCAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATATTACAAGTAGTGAATTTTTATTTACTATTGTATTTTATTCAT  687

seq1  CTGTATTGGATTTTCATTATTTCAGACCTTGGTTTCATCATTGTTAATTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTGGATTTTCATTATTTCAGACCTTGGTTTCATCATTGTTAATTA  737

seq1  AATAGATTTTTTAAATAATCATTGTTTTATACAGTTTTGAATTGAGCTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATTTTTTAAATAATCATTGTTTTATACAGTTTTGAATTGAGCTTT  787

seq1  ATGAAATGCATTTTAAGTATATAAAATTTAATGATTGCATGTAAAACATG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATGCATTTTAAGTATATAAAATTTAATGATTGCATGTAAAACATG  837

seq1  TTATAAACATCTTTATAGTCACTGCATAAAATCAATTAACTTAATAAATG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAACATCTTTATAGTCACTGCATAAAATCAATTAACTTAATAAATG  887

seq1  TTAATTTTACTTGTTAGGTTGCATACATAACTACTTTCTAACATTATAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTACTTGTTAGGTTGCATACATAACTACTTTCTAACATTATAAA  937

seq1  ACATATATCTTATTGCATATATGTATGATTAAGAATGTTTGGCTTTTGTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATCTTATTGCATATATGTATGATTAAGAATGTTTGGCTTTTGTT  987

seq1  TTAGATTTTCTTTTTATTGAATGTGAAATAAGGTTTTGCTTCCATATAGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTTTCTTTTTATTGAATGTGAAATAAGGTTTTGCTTCCATATAGA  1037

seq1  TGTGTGTACCATCTGTATTCCTTGTGCCCTCAGAATAGGCCAGGAGAGAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTACCATCTGTATTCCTTGTGCCCTCAGAATAGGCCAGGAGAGAG  1087

seq1  CTTCAGATTATCTGGAATTC  1117
      ||||||||||||||||||||
seq2  CTTCAGATTATCTGGAATTC  1107