BAC Information

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BAC

Clone NameB6Ng01-053L22
Chromosome16 (Build37)
Map Location 71,444,464 - 71,445,560
singlet/doubletsinglet
Overlap genenone
Upstream geneGbe1, D16Ertd519e, LOC100039231
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053L22.bB6Ng01-053L22.g
ACCDH876701DH876702
length1,1711,088
definitionDH876701|Mus musculus domesticus DNA, BAC clone: B6Ng01-053L22, 5' end.DH876702|Mus musculus domesticus DNA, BAC clone: B6Ng01-053L22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgctgatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgcttacagtcagctaatggatggatcatagggctccca
tgaggagctagagaaagtagccaaggagctaagggatctgtaaccctata
gtggaacacattatgagcttacagtacccggagctcttgactctagctgc
attatatcaaagatgcctagtcggccatcacttgcaaaaagccaattgac
ttgcaaactttatatgcccagtcagggaatacaaggccaaaagggggatt
gggggtcaggggaattgtggt
gaattcagtattgtctacatatagacataaatgttgaaggacaccacagt
cagaatgtttttaattggcttttccttaaaggtcatgaagagaataaagc
ccaaataagatttccaagtgttgtaagaagatcaccatgataaaacacca
acaaagtctaggacagtatatatgcacagaatatactgagctcacgatgc
acttcctatataatagattgaatttcagtttgagggcccaggtatgtttt
tcatgtaactaccctgggaacttaataaaaacaaggcacagacaattaag
caaagaggatataagagtatatcaaaggaaatttatagttaattttaaga
taacccttaaatatgaaattgtttatagctctgaatatttaattatcttg
aaattgatactaacttaaaaggttgatttataaaagccttgcaacttcca
gggactaagtgaaatagtcacctttctgtctgaaatccccgtgctttgta
cttataaagtggaaagtgctaaaagagatctaaatatatctactagcctg
ctctacaacactatctcactttgggccattcatttagttctaaatgtgtg
taataagtgtgaattaccatatatcatatataacaagaatttatgatttt
aaaattcatacttgcaagcatatatacaccaacttcctttttttacattg
accttcatatttcagattatgtattcatgaggccaaaaagaaattaaaag
aataaaatctaagattttggttaatagctattctctttttatgttatcaa
actgatctggaagtcaacaacaagttggtcatcactgttagtgtttcaga
taatcaaagggtagaaatgatagatcactgataatgttaaccaaacccta
ctttctttcaataaattcacaacagagttactcacctactattgaagaaa
gatacatggtctcatatatttatataaggaaagctagacattttttctgt
gtcattttatttctaaatctctttccattggtcttgtgatctgacatcaa
acactttgtttatctggaaccttgaactttcatctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_71444464_71445560
seq2: B6Ng01-053L22.g_68_1155

seq1  GAATTCAGTATTGTCTACATATAGACATAAATGTTGAAGGACACCACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTATTGTCTACATATAGACATAAATGTTGAAGGACACCACAGT  50

seq1  CAGAATGTTTTTAATTGGCTTTTCCTTAAAGGTCATGAAGAGAATAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGTTTTTAATTGGCTTTTCCTTAAAGGTCATGAAGAGAATAAAGC  100

seq1  CCAAATAAGATTTCCAAGTGTTGTAAGAAGATCACCATGATAAAACACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAAGATTTCCAAGTGTTGTAAGAAGATCACCATGATAAAACACCA  150

seq1  ACAAAGTCTAGGACAGTATATATGCACAGAATATACTGAGCTCACGATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTCTAGGACAGTATATATGCACAGAATATACTGAGCTCACGATGC  200

seq1  ACTTCCTATATAATAGATTGAATTTCAGTTTGAGGGCCCAGGTATGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTATATAATAGATTGAATTTCAGTTTGAGGGCCCAGGTATGTTTT  250

seq1  TCATGTAACTACCCTGGGAACTTAATAAAAACAAGGCACAGACAATTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAACTACCCTGGGAACTTAATAAAAACAAGGCACAGACAATTAAG  300

seq1  CAAAGAGGATATAAGAGTATATCAAAGGAAATTTATAGTTAATTTTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGGATATAAGAGTATATCAAAGGAAATTTATAGTTAATTTTAAGA  350

seq1  TAACCCTTAAATATGAAATTGTTTATAGCTCTGAATATTTAATTATCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCTTAAATATGAAATTGTTTATAGCTCTGAATATTTAATTATCTTG  400

seq1  AAATTGATACTAACTTAAAAGGTTGATTTATAAAAGCCTTGCAACTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGATACTAACTTAAAAGGTTGATTTATAAAAGCCTTGCAACTTCCA  450

seq1  GGGACTAAGTGAAATAGTCACCTTTCTGTCTGAAATCCCCGTGCTTTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTAAGTGAAATAGTCACCTTTCTGTCTGAAATCCCCGTGCTTTGTA  500

seq1  CTTATAAAGTGGAAAGTGCTAAAAGAGATCTAAATATATCTACTAGCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAAGTGGAAAGTGCTAAAAGAGATCTAAATATATCTACTAGCCTG  550

seq1  CTCTACAACACTATCTCACTTTGGGCCATTCATTTAGTTCTAAATGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACAACACTATCTCACTTTGGGCCATTCATTTAGTTCTAAATGTGTG  600

seq1  TAATAAGTGTGAATTACCATATATCATATATAACAAGAATTTATGATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGTGTGAATTACCATATATCATATATAACAAGAATTTATGATTTT  650

seq1  AAAATTCATACTTGCAAGCATATATACACCAACTTCCTTTTTTTACATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCATACTTGCAAGCATATATACACCAACTTCCTTTTTTTACATTG  700

seq1  ACCTTCATA-TTCAGATTATGTATTCATGAGGCCAAAAAGAAAATTAAAA  749
      ||||||||| |||||||||||||||||||||||||||||| |||||||||
seq2  ACCTTCATATTTCAGATTATGTATTCATGAGGCCAAAAAG-AAATTAAAA  749

seq1  GAATAAAATCTAAGATTTTGGTTAATAGCTATTCTCTTTTTATGTTATCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAATCTAAGATTTTGGTTAATAGCTATTCTCTTTTTATGTTATCA  799

seq1  AACTGATCTGGAAGTCAACAACAAGTTGGTCATCACTGTTAGTGTTTCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATCTGGAAGTCAACAACAAGTTGGTCATCACTGTTAGTGTTTCAG  849

seq1  ATAATCAAA-GGTAGAAATGATAGATCACTGATAATGTTAACCAAACCCT  898
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAAAGGGTAGAAATGATAGATCACTGATAATGTTAACCAAACCCT  899

seq1  ACTTTCTTTCAATAAATTCACAACAGAGTTACTCACCTACTATTGAAGAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTTCAATAAATTCACAACAGAGTTACTCACCTACTATTGAAGAA  949

seq1  AGAATACATGGTCTCCATAATATTTATATAAGGAAAGCTAGACATTTTTT  998
      || ||||||||||| ||| |||||||||||||||||||||||||||||||
seq2  AG-ATACATGGTCT-CAT-ATATTTATATAAGGAAAGCTAGACATTTTTT  996

seq1  CTGTGTCATTTTATTTCTAAATCTCCTTCCCATTGGTCTTGTGAATCTGA  1048
      |||||||||||||||||||||||| ||| |||||||||||||| ||||||
seq2  CTGTGTCATTTTATTTCTAAATCT-CTTTCCATTGGTCTTGTG-ATCTGA  1044

seq1  CATCAAACACTTTGTTTTATCTGGGAACACTTTGAACTTTCATTCTTTC  1097
      |||||||||||||| |||||||||    || ||||||||||| ||||||
seq2  CATCAAACACTTTG-TTTATCTGG---AACCTTGAACTTTCA-TCTTTC  1088