BAC Information

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BAC

Clone NameB6Ng01-054H18
Chromosome16 (Build37)
Map Location 81,903,834 - 81,904,953
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039724, Ncam2, LOC621470, LOC435484
Downstream genePgk1-ps1, EG665260
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054H18.bB6Ng01-054H18.g
ACCDH877215DH877216
length1,2331,098
definitionDH877215|Mus musculus domesticus DNA, BAC clone: B6Ng01-054H18, 5' end.DH877216|Mus musculus domesticus DNA, BAC clone: B6Ng01-054H18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgttttttcttgtaccgtgtgggtttcagagattaaactcaagt
ggtcaggtttaataataataataataataaagaactaaaaagggtggact
ccagaaaatcagataaccccattaaaaaatggggctcagagctaaacaaa
gaattctcacctgaggaatagcgaatggctgagaagtacctgaaaaaata
ttctgcatccttaatcatcaggaaaatgcaaatcaaaacagccctgagat
tccatctcacagtagtcagaatggctaagataaaaaattcaggtgacagc
agatgctggcgaggatgtgaagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatcctgcaatatctctcctggac
atatatccagaagatgttccaaccggtaagaaagacacatgcttcagtag
gtttatagcagccttatttataatagccagaagctggaatgaacccagat
gcccctcaacaaaggaatggatacagaaaatgtggtacatttccacaatg
gagtactactcagttattaaaaagaatgaatttatgaaattcctagttaa
atggattgacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcacatgatatgtactcactgataaatggatattagcccagaaat
gtagaatacccaagatataagatataatttgtgtaacacatgaaactcaa
gaagatcggtgaccaaagtgtggacactttgctcattcttagaatttgga
acaaaacacccatggtaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatctagagactgccatacctgggatccatcccataatc
agcctccaaaggctaacaccattgcatacatagcagatttgctgaaagga
ccagatatagctgttcttgtagactatgctggggctaggaacacagaagt
ggatgctcacagtgctatgatagattctagggctcatgaagagctaagaa
agttccaaggagctagcatctgcaccttagtggaacaacaaattgaacta
cgtccttggatcctgctcttacgctagtcaaatggcttaggacctagaat
agcatgtcgcacatatagtctcactacacagga
gaattctattttccctaagacttgcaacaatgtttcaaaaatattttata
ttttcttcttaatttctcccattgtgttttccttgggcagacttctctat
ttactttctttattatttttctgtgtaagataattaatatcacacctttg
tttttttataaattattgagaatattttctcatttcaaggtttctaatag
actagatttatatatggaatcatttcataaccaatcttttaaaattctat
tttatcaatgttgtttaacttcttatcactacatacatctaaaatattta
ttgtggtttttttttttaattttcatgctttgatattaagactcatgtcc
tagggaattaatatgttggaatttgtgtcttagaagcatcacaaaaggac
tgaaagcttaataatggatccaaaaattctctttcatctttctcatcaag
acagagtaatgctagaaaatacctcttcatggacttgaaatagaccaccc
tcgaacactatgcttcccaacactttgatctttgattctcagtctttaga
ctgtgataaataattcccttttgtctgtatcattcccacaatacagtaaa
attttagaacacaatgatacactaagattattatttctatcccatacaga
tgtaaatacttctgattgacttatcaatatcaatgtccagttctacattc
tggttttctagctcatgctgagggaatgcaatcccccccaccccttgata
tgagtgtgctttaattttatatattatgtgggattatagttacagtgatt
tcactcaagcagtgacaacaagaccttaaaaacttggctttctatccacc
cattgatgaccatgacataagagtgtcccaacaagacagagagcatgacc
ttatcttaagtgattacacgtatcccttgtctacattattgaaacaaaac
ctatagaacactttgtttaatttcccttcaaggcaagtaaactagtttca
tcttgctacattttgccagatatttgtgacaatttcttttactatacatg
aaatattaacattgtcctgtcactgcttattaccaccctgaataacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_81903834_81904953
seq2: B6Ng01-054H18.g_66_1163

seq1  GAATTCTATTTTCCCTAAGACTTGCAACAATGTTTCAAAAATATTTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTTCCCTAAGACTTGCAACAATGTTTCAAAAATATTTTATA  50

seq1  TTTTCTTCTTAATTTCTCCCATTGTGTTTTCCTTGGGCAGACTTCTCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCTTAATTTCTCCCATTGTGTTTTCCTTGGGCAGACTTCTCTAT  100

seq1  TTACTTTCTTTATTATTTTTCTGTGTAAGATAATTAATATCACACCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTCTTTATTATTTTTCTGTGTAAGATAATTAATATCACACCTTTG  150

seq1  TTTTTTTATAAATTATTGAGAATATTTTCTCATTTCAAGGTTTCTAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATAAATTATTGAGAATATTTTCTCATTTCAAGGTTTCTAATAG  200

seq1  ACTAGATTTATATATGGAATCATTTCATAACCAATCTTTTAAAATTCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGATTTATATATGGAATCATTTCATAACCAATCTTTTAAAATTCTAT  250

seq1  TTTATCAATGTTGTTTAACTTCTTATCACTACATACATCTAAAATATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAATGTTGTTTAACTTCTTATCACTACATACATCTAAAATATTTA  300

seq1  TTGTGGTTTTTTTTTTTAATTTTCATGCTTTGATATTAAGACTCATGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTTTTTTTTTTTAATTTTCATGCTTTGATATTAAGACTCATGTCC  350

seq1  TAGGGAATTAATATGTTGGAATTTGTGTCTTAGAAGCATCACAAAAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAATTAATATGTTGGAATTTGTGTCTTAGAAGCATCACAAAAGGAC  400

seq1  TGAAAGCTTAATAATGGATCCAAAAATTCTCTTTCATCTTTCTCATCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCTTAATAATGGATCCAAAAATTCTCTTTCATCTTTCTCATCAAG  450

seq1  ACAGAGTAATGCTAGAAAATACCTCTTCATGGACTTGAAATAGACCACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTAATGCTAGAAAATACCTCTTCATGGACTTGAAATAGACCACCC  500

seq1  TCGAACACTATGCTTCCCAACACTTTGATCTTTGATTCTCAGTCTTTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACACTATGCTTCCCAACACTTTGATCTTTGATTCTCAGTCTTTAGA  550

seq1  CTGTGATAAATAATTCCCTTTTGTCTGTATCATTCCCACAATACAGTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATAAATAATTCCCTTTTGTCTGTATCATTCCCACAATACAGTAAA  600

seq1  ATTTTAGAACACAATGATACACTAAGATTATTATTTCTATCCCATACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGAACACAATGATACACTAAGATTATTATTTCTATCCCATACAGA  650

seq1  TGTAAATACTTCTGATTGACTTATCAATATCAATGTCCAGTTCTACATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATACTTCTGATTGACTTATCAATATCAATGTCCAGTTCTACATTC  700

seq1  TGGTTTTCTAGCTCATGCTGAGGGAATGCAATCCCCCCCACCCCTTGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTCTAGCTCATGCTGAGGGAATGCAATCCCCCCCACCCCTTGATA  750

seq1  TGAGTGTGCTTTAATTTTATATATTATGTGGGATTATAGTTACAGTGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTGCTTTAATTTTATATATTATGTGGGATTATAGTTACAGTGATT  800

seq1  TCACTCAAGCAGTGACAACAAGACCTTAAAAACTTGGCTTTCTATCCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCAAGCAGTGACAACAAGACCTTAAAAACTTGGCTTTCTATCCACC  850

seq1  CATTGATGACCATGACATAAGAGTGTCCCAACAAGACAGAGAGCATGACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATGACCATGACATAAGAGTGTCCCAACAAGACAGAGAGCATGACC  900

seq1  TTATCTTAAGTGATTACAACGTATCCCTTGTCTACATTATTGAAACAAAA  950
      ||||||||||||||||| |||||||||||||||||||||||||||| |||
seq2  TTATCTTAAGTGATTAC-ACGTATCCCTTGTCTACATTATTGAAAC-AAA  948

seq1  ACCTAATAAGAACACTTTGTTTAATTTCCCTTCAAGGCAAGTAAACTTAG  1000
      |||||   |||||||||||||||||||||||||||||||||||||| |||
seq2  ACCTA--TAGAACACTTTGTTTAATTTCCCTTCAAGGCAAGTAAAC-TAG  995

seq1  TTTCCATCTTGCCTTACAATTTTTGCCAAGATA-TTGTGACAAAATTTCT  1049
      ||| ||||||||  ||||  ||||||| ||||| |||||||  |||||||
seq2  TTT-CATCTTGC--TACA--TTTTGCC-AGATATTTGTGAC--AATTTCT  1037

seq1  TTTACTATTACATTGAAAATAATTAACATTGTCCCTGTCACTGGCTTATT  1099
      ||||||| |||| |||||   ||||||||||| ||||||||| ||||| |
seq2  TTTACTA-TACA-TGAAA--TATTAACATTGT-CCTGTCACT-GCTTA-T  1080

seq1  TACCAACCCTGAAAATAACAG  1120
      |||| ||||||  ||||||||
seq2  TACC-ACCCTG--AATAACAG  1098