BAC Information

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BAC

Clone NameB6Ng01-056E19
Chromosome16 (Build37)
Map Location 47,591,246 - 47,591,981
singlet/doubletsinglet
Overlap geneLOC628776
Upstream geneLOC628757
Downstream geneEG667741, EG639644, EG637273, Dppa4, Dppa2, EG433023, Morc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056E19.bB6Ng01-056E19.g
ACCDH878504DH878505
length9601,264
definitionDH878504|Mus musculus domesticus DNA, BAC clone: B6Ng01-056E19, 5' end.DH878505|Mus musculus domesticus DNA, BAC clone: B6Ng01-056E19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctgtagtccaccttcttgagttctttatatatattggatattagtcccc
tatctgatttaggataggtaaagatcctttcctaatctgttggtggcctt
tttgtcttattgtcggtgtcttttgcctaaaagaagctttgcaattttat
gaggtcccatttgttgattctcgatcttacagcacaagccattactgttc
tattcaggaacttttcccctgtgccaatatcttcgaggcctttccccact
ttctcctctttaagtttcagtgtctctgccttgatccacttagatttgac
cttagtacaggagataggaatggatcaatagcattcttctacatgataac
caccagttgtgccagcacaatttgttgaaaatgtctgcaaaacacatgaa
actcaagaagaacaaagaccaaaatgtggacactttgccccttcttagaa
ttgggaacaaaacacccatggaaggagttacagatatttgtgaccctggt
ctggccgggttttctgcttccctaatgctgtctcaggtccagcacaattg
gattggaacagaagttgtgttccactcactggtggtccaaagatcacatg
gagagtcctctagggaccttggggagtgtccgccgactccttgcccaagg
tgacccggtgttggtgctgaccagaagatgaaagatattttttttccttt
tccatttttattagctatttagctaatttacatttccaatgctataccaa
aagtcccccatacccacccacccccactcccctacccacccactccccct
ttttggctctggcgttcccctgtacttgaaagatattttatcatatgttt
acttctggctgtagttattcatacaaaactgtttcattgctaaactagat
attatatgat
gaattcaaggcctgtattagtcagggttttactgctgtgaatggacacca
tgaccaaggcaagtattataaaaaaacaacatttaattggggctggctta
caggttcagaggttcagtccattatcatcatggtgggaacatggcagtat
ccaggcaggcatggcgcaggaggagctgagagttctatgtcttcatccaa
aggctgctagttgaagactgacttccaggcaactagggagaggatcttat
acccacacccagagtgacacacccattccaaccaggtcacacctatttca
acaaggccataccttcagacagcgccactccctggtccaaggatatacaa
actgtcacaagactcatacgaaaaacatgataaaagcaatctacagaaaa
ctagtagctaatatcaaagtaagtggagagaagctggaagcaatcccaat
aaaatcagggactagacaaggctgcccactatctccctacttattcaata
tagtactcgaaagcctagccagatcaattagacaacaaaaggaggtcaag
gggatacaaattggaatggaaggagtcaaaatatcactatttgcagatga
tatgattgtatatataagtgatcctaaaaattccatcagagaactcctaa
acctcataaatagcttcagtgaagtagctggatataaaagtaactcaaac
aaatcaatggcctttctctacacaaagaataaataggctgagaaagaaat
tagggaaaacaacaccctccacattagtcacaaataatatataatacctt
ggtgtgaatctaactaaggaagtgaaagatctttatgataagaattttag
gtctctgaaaaaagaaattcaaagaagatctcagaagatggaaagatcta
tgctcatgggtttgcaggattatatagtcaaaatggctatcctgctgaaa
acaaactacagattcatgcaatccccgtcaaaattccaactgaatctcac
tgagtagaatgggtaactggcaattcatctgaataacaaaaacctagata
gcaaaatatttctccaacatatagatctctgaaagaatcacattgcttga
cctcagcctgtatacgagccactgtgattataaaactgccatggtaactg
gtgcctggtacgacagtagaccaattgatatgacctgagacctgatgacc
acacctattaccattgtatcttgtgcacaggactcataccatctctggtg
aaatgaatcgacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_47591246_47591981
seq2: B6Ng01-056E19.b_278_1006

seq1  GCACAAGCCATTACTGTTCTATTCAGGAACTTTTCCCCTGTGCCAATATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAGCCATTACTGTTCTATTCAGGAACTTTTCCCCTGTGCCAATATC  50

seq1  TTCGAGGCCTTTCCCCACTTTCTCCTCTTTAAGTTTCAGTGTCTCTGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAGGCCTTTCCCCACTTTCTCCTCTTTAAGTTTCAGTGTCTCTGCCT  100

seq1  TGATCCACTTAGATTTGACCTTAGTACAGGAGATAGGAATGGATCAATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCACTTAGATTTGACCTTAGTACAGGAGATAGGAATGGATCAATAG  150

seq1  CATTCTTCTACATGATAACCACCAGTTGTGCCAGCACAATTTGTTGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTCTACATGATAACCACCAGTTGTGCCAGCACAATTTGTTGAAAA  200

seq1  TGTCTGCAAAACACATGAAACTCAAGAAGAACAAAGACCAAAATGTGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCAAAACACATGAAACTCAAGAAGAACAAAGACCAAAATGTGGAC  250

seq1  ACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTAC  300

seq1  AGATATTTGTGACCCTGGTCTGGCCGGGTTTTCTGCTTCCCTAATGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTGTGACCCTGGTCTGGCCGGGTTTTCTGCTTCCCTAATGCTGT  350

seq1  CTCAGGTCCAGCACAATTGGATTGGAACAGAAGTTGTGTTCCACTCACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTCCAGCACAATTGGATTGGAACAGAAGTTGTGTTCCACTCACTG  400

seq1  GTGGTCCAAAGATCACATGGAGAGTCCTCTAGGGACCTTGGGGAGTGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCCAAAGATCACATGGAGAGTCCTCTAGGGACCTTGGGGAGTGTCC  450

seq1  GCCGACTCCTTGCCCAAGGTGACCCGGTGTTGGTGCTGACCAGAAGATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGACTCCTTGCCCAAGGTGACCCGGTGTTGGTGCTGACCAGAAGATGA  500

seq1  AAGATATTTTTTTTCCTTTTCCATTTTTATTAGCTATTTAGCTAATTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTTTTTTTCCTTTTCCATTTTTATTAGCTATTTAGCTAATTTAC  550

seq1  ATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCCACTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCCACTCCC  600

seq1  CTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTAC-TGAAA  649
      |||||||||||||||||||||||||| ||||||||||||||||| |||||
seq2  CTACCCACCCACTCCCCCTTTTTGGCTCTGGCGTTCCCCTGTACTTGAAA  650

seq1  GATATTTTTATCATATGTTTACTTCTTGGGCTGTAGTTATTTCATACAAA  699
      |||| |||||||||||||||||||||  ||||||||||| ||||||| ||
seq2  GATA-TTTTATCATATGTTTACTTCT--GGCTGTAGTTA-TTCATAC-AA  695

seq1  AACTGTTTCAATTGCTAAACTTAGTATATTATATGAT  736
      ||||||||| |||||||||| ||| ||||||||||||
seq2  AACTGTTTC-ATTGCTAAAC-TAG-ATATTATATGAT  729