BAC Information

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BAC

Clone NameB6Ng01-056E22
Chromosome16 (Build37)
Map Location 75,561,536 - 75,701,928
singlet/doubletdoublet
Overlap geneD930038D03Rik, Rbm11
Upstream geneLOC665042
Downstream geneStch, LOC546667, Samsn1, 4930578N18Rik, LOC100039457, Nrip1, LOC100039316
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056E22.bB6Ng01-056E22.g
ACCDH878508DH878509
length1,0451,134
definitionDH878508|Mus musculus domesticus DNA, BAC clone: B6Ng01-056E22, 5' end.DH878509|Mus musculus domesticus DNA, BAC clone: B6Ng01-056E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,561,536 - 75,562,595)(75,700,774 - 75,701,928)
sequence
gaattcccaggtggggaggcaggagtggggggggagcaccctcatagaag
caggagaagggaggatgggataggtagtttctggaggagaaaccaggaaa
ggggtatatttgaaatgtaaataaataaaatatccaataaaaaaagtccc
atcaaatttttaaattgagcatgactttttcatgaaattaataaaacatt
ttcatcaaataataatccggaaagcatagctgtttcaatttaacaggcta
tactaacacattgcaacagtgtttgcaattatagaatttctcttttctag
ttctatatccctaaaatactgatgcaatgtcaactatgtctatggagaca
agtgttgttaaaatgcacttatgtcacttcccttccccagtttttcatat
tttctttcgttggttcaatcttctcttagtcacagtggaatttggtcatg
cgcttatccgctaccgtgcttaagagggccccattccacactcagaagcc
atgaataaccccatgtgtgggacacagaagtggccagtgttgtcaaatct
gtgtatatgtggtattgtaagtgctaaatcttgtgatcaaactcatattc
tagaagtattctaggatacttgagttagatgtgttttttctagataatag
aaaattgttctttatggttaaaataatgaactaaaattgttgaaaacaac
accaaacaggttttcacccatgactagttgttgtatatgctagtaacctt
agtataattaagtagtatcaatttaaattaattctgtcagtaactctttt
taagtcaatagcaaaaattctgatatcaaatcttgcccacagattaagta
accaaagataaattaatttcccatatcaatttggaccctgtataactgta
attcagaatatattgtatgaaaaaaatctagttcacaaagaaaaaaaaca
atgaaatactttttctatacctgaaaaatgatgaagacacctggctgatg
tttcctccatttggataaaatcaagggcccgatggctccaatacc
gaattcctggacctccatgtttgatcacaaaatgcaagatgggaaggaga
gtactgttggcacaatcccttcattacatggctagaaagacggctagtgg
agacacagtggatgtttttctaagacacggaatatgaacatgactaaggt
tctaggtcattgcttcagggatatcacactgaatgtaaatgggattttta
actacatttaatggtgtactttagatcaatgaaatttatgtctggcttct
attctaaggtagctaaagaaaccttatatataagtatcccttcgtaagta
tctatcgctttacccaccagccatctatcttctacctcagtctttgacaa
aatattttatgactcatttttataaacctttatgttctaaagagccccaa
actcaaattctcagaaatacttgccttgagaaatgtattctatttctaga
acaaagattatctctcctttttaccttccatatttgtaatttgacaaaaa
gttatgtaatattcttacaaatttaccatatttcatttttcatggtggca
tagatgtatcagcacattttcaagaataatgtcttactttaggtctgtta
cagtagaagacttctggatggcaaagctctccaaatgcaagagaagcatg
gtacttattttgaaagatgaaaaccaaaacagtagcaaatgcaactacat
cagcatgatattttgtgcacaattcactgtaaattaaacataaaagcatt
aaaatttacattctttatgttttagatctgcccttccatatgccatacaa
tcgttgattgacatagccttcaaaataaatggaggaaatgagttcgttga
ttccttaagcaaatgcatagagctagaaaaaattatcctgagtgaggtaa
cccaattgcaaagaacacacatggtatgcactcactgataagcccaaaag
ctccaaatatcagatacattcacagaccacatgaagctcaagagaagaaa
gatcaagtgtggtactttgttcttcttagaagagaactaatactccagag
cagtatggaataagtgttaagcgagacttaagaaagccttccaagactgt
cccacctgggatcatccattactggctcaactca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_75561536_75562595
seq2: B6Ng01-056E22.b_43_1087

seq1  GAATTCCCAGGTGGGGAGGCAGGAGTGGGGGGGGAGCACCCTCATAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGGTGGGGAGGCAGGAGTGGGGGGGGAGCACCCTCATAGAAG  50

seq1  CAGGAGAAGGGAGGATGGGATAGGTAGTTTCTGGAGGAGAAACCAGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAAGGGAGGATGGGATAGGTAGTTTCTGGAGGAGAAACCAGGAAA  100

seq1  GGGGTATATTTGAAATGTAAATAAATAAAATATCCAATAAAAAAAGTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTATATTTGAAATGTAAATAAATAAAATATCCAATAAAAAAAGTCCC  150

seq1  ATCAAATTTTTAAATTGAGCATGACTTTTTCATGAAATTAATAAAACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATTTTTAAATTGAGCATGACTTTTTCATGAAATTAATAAAACATT  200

seq1  TTCATCAAATAATAATCCGGAAAGCATAGCTGTTTCAATTTAACAGGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAAATAATAATCCGGAAAGCATAGCTGTTTCAATTTAACAGGCTA  250

seq1  TACTAACACATTGCAACAGTGTTTGCAATTATAGAATTTCTCTTTTCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAACACATTGCAACAGTGTTTGCAATTATAGAATTTCTCTTTTCTAG  300

seq1  TTCTATATCCCTAAAATACTGATGCAATGTCAACTATGTCTATGGAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATCCCTAAAATACTGATGCAATGTCAACTATGTCTATGGAGACA  350

seq1  AGTGTTGTTAAAATGCACTTATGTCACTTCCCTTCCCCAGTTTTTCATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGTTAAAATGCACTTATGTCACTTCCCTTCCCCAGTTTTTCATAT  400

seq1  TTTCTTTCGTTGGTTCAATCTTCTCTTAGTCACAGTGGAATTTGGTCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCGTTGGTTCAATCTTCTCTTAGTCACAGTGGAATTTGGTCATG  450

seq1  CGCTTATCCGCTACCGTGCTTAAGAGGGCCCCATTCCACACTCAGAAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTATCCGCTACCGTGCTTAAGAGGGCCCCATTCCACACTCAGAAGCC  500

seq1  ATGAATAACCCCATGTGTGGGACACAGAAGTGGCCAGTGTTGTCAAATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAACCCCATGTGTGGGACACAGAAGTGGCCAGTGTTGTCAAATCT  550

seq1  GTGTATATGTGGTATTGTAAGTGCTAAATCTTGTGATCAAACTCATATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATATGTGGTATTGTAAGTGCTAAATCTTGTGATCAAACTCATATTC  600

seq1  TAGAAGTATTCTAGGATACTTGAGTTAGATGTG-TTTTTCTAGATAATAG  649
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TAGAAGTATTCTAGGATACTTGAGTTAGATGTGTTTTTTCTAGATAATAG  650

seq1  AAAATTGTTCTTTATGGTTAAAATAATGAACTAAAATTGTTG-AAACAAC  698
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAAATTGTTCTTTATGGTTAAAATAATGAACTAAAATTGTTGAAAACAAC  700

seq1  ACCAAACAGG-TTTCACCCATGACTAGTTGTTGTATATGCTAGTAACCTT  747
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACAGGTTTTCACCCATGACTAGTTGTTGTATATGCTAGTAACCTT  750

seq1  AGTAT-ATTAAGTAGTATCAATTTAAATTAATTCTTGTCAGTAACTC-TT  795
      ||||| |||||||||||||||||||||||||||| |||||||||||| ||
seq2  AGTATAATTAAGTAGTATCAATTTAAATTAATTC-TGTCAGTAACTCTTT  799

seq1  TTAAGTCAATAGCAAAAATTCTGATATCAAAATCTTGCCCACAGATTAAG  845
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTAAGTCAATAGCAAAAATTCTGATATC-AAATCTTGCCCACAGATTAAG  848

seq1  TAGCCAAAAGATAAATTAATTTCCCATATCATTTTGGACCCTGTATAACT  895
      || || ||||||||||||||||||||||||| ||||||||||||||||||
seq2  TAACC-AAAGATAAATTAATTTCCCATATCAATTTGGACCCTGTATAACT  897

seq1  GTAA-TCAGAATATATTGTATGAAAAAAAATCTAGTTTCAACAAAAGAAA  944
      |||| ||||||||||||||||| ||||||||||||||    || ||  ||
seq2  GTAATTCAGAATATATTGTATG-AAAAAAATCTAGTT----CACAAAGAA  942

seq1  AAAAAACAATGAAAATACTTTTTTCATATACCTGAAAAAATTGATGTAGG  994
      ||||||||||| |||||||||||   |||||||||||||  ||||| | |
seq2  AAAAAACAATG-AAATACTTTTT--CTATACCTGAAAAA--TGATG-AAG  986

seq1  ACAACCTGGCTGATGTTTTCCTCCATTTGGATAAAAATCAATGTGCCCCG  1044
      || |||||||||||| |||||||||||||||| ||||||||   | ||||
seq2  AC-ACCTGGCTGATG-TTTCCTCCATTTGGAT-AAAATCAA--GGGCCCG  1031

seq1  ATGGCTCTCCAATACC  1060
      ||||  ||||||||||
seq2  ATGG--CTCCAATACC  1045

seq1: chr16_75700774_75701928
seq2: B6Ng01-056E22.g_67_1200 (reverse)

seq1  TGAGTTTGATGCCAGTATATGGGATGAATCCCCAGGTGGGACAGTCTCTG  50
      |||| |||| ||||||| || ||||||   ||||||||||||||||| ||
seq2  TGAG-TTGA-GCCAGTA-AT-GGATGA--TCCCAGGTGGGACAGTCT-TG  43

seq1  GATGGCCTTTCCTTTAGTCTCTGCTCTACACTTTATCTCCATACTTGCTT  100
      || |||  || ||| |||||| |||  |||| |||| ||||||| ||| |
seq2  GAAGGC--TTTCTTAAGTCTC-GCTTAACAC-TTAT-TCCATAC-TGC-T  86

seq1  CTGTGAGTATTTTGTTCTCCTTCTAAGAAGGACCAAAGTACCCACACTTT  150
      ||| ||||| || ||||| |||||||||| || ||||||| |||||| ||
seq2  CTG-GAGTA-TTAGTTCT-CTTCTAAGAA-GAACAAAGTA-CCACAC-TT  130

seq1  GGTCTTTCTTCTTCTTGAGCTTCATGTGGTCTGTGAATTGTATCTTGATT  200
      | ||||||||| ||||||||||||||||||||||||| |||||| ||| |
seq2  GATCTTTCTTC-TCTTGAGCTTCATGTGGTCTGTGAA-TGTATC-TGA-T  176

seq1  ATTTGGAGCTTTTGGGCTTATCAGTGAGTGCATACCATGTGTGTTCTTTT  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATTTGGAGCTTTTGGGCTTATCAGTGAGTGCATACCATGTGTGTTC-TTT  225

seq1  GCAATTGGGTTACCTCACTCAGGATAATTTTTTCTAGCTCTATGCATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTGGGTTACCTCACTCAGGATAATTTTTTCTAGCTCTATGCATTTG  275

seq1  CCTAAGGAATCAACGAACTCATTTCCTCCATTTATTTTGAAGGCTATGTC  350
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGAATCAACGAACTCATTTCCTCCATTTATTTTGAAGGCTATGTC  325

seq1  AATCAACGATTGTATGGCATATGGAA-GGCAGATCTAAAAACATAAAGAA  399
      |||||||||||||||||||||||||| ||||||||| |||||||||||||
seq2  AATCAACGATTGTATGGCATATGGAAGGGCAGATCT-AAAACATAAAGAA  374

seq1  TGTAAA-TTTAATGC-TTTATGTTTAATTTACAGTGAATTGTGCACAAAA  447
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  TGTAAATTTTAATGCTTTTATGTTTAATTTACAGTGAATTGTGCACAAAA  424

seq1  TATCATGCTGATGTAGTTGCATTTGCTACTGTTT--GGTTTCATCTTTCA  495
      ||||||||||||||||||||||||||||||||||  | ||||||||||||
seq2  TATCATGCTGATGTAGTTGCATTTGCTACTGTTTTGGTTTTCATCTTTCA  474

seq1  AAATAAGTACCATGCTTCTCTTGCATTTGGAGAGCTTTGCCATCCAGAAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGTACCATGCTTCTCTTGCATTTGGAGAGCTTTGCCATCCAGAAG  524

seq1  TCTTCTACTGTAACAGACCTAAAGTAAGACATTATTCTTGAAAATGTGCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTACTGTAACAGACCTAAAGTAAGACATTATTCTTGAAAATGTGCT  574

seq1  GATACATCTATGCCACCATGAAAAATGAAATATGGTAAATTTGTAAGAAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATCTATGCCACCATGAAAAATGAAATATGGTAAATTTGTAAGAAT  624

seq1  ATTACATAACTTTTTGTCAAATTACAAATATGGAAGGTAAAAAGGAGAGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATAACTTTTTGTCAAATTACAAATATGGAAGGTAAAAAGGAGAGA  674

seq1  TAATCTTTGTTCTAGAAATAGAATACATTTCTCAAGGCAAGTATTTCTGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTTGTTCTAGAAATAGAATACATTTCTCAAGGCAAGTATTTCTGA  724

seq1  GAATTTGAGTTTGGGGCTCTTTAGAACATAAAGGTTTATAAAAATGAGTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGAGTTTGGGGCTCTTTAGAACATAAAGGTTTATAAAAATGAGTC  774

seq1  ATAAAATATTTTGTCAAAGACTGAGGTAGAAGATAGATGGCTGGTGGGTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATATTTTGTCAAAGACTGAGGTAGAAGATAGATGGCTGGTGGGTA  824

seq1  AAGCGATAGATACTTACGAAGGGATACTTATATATAAGGTTTCTTTAGCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGATAGATACTTACGAAGGGATACTTATATATAAGGTTTCTTTAGCT  874

seq1  ACCTTAGAATAGAAGCCAGACATAAATTTCATTGATCTAAAGTACACCAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAGAATAGAAGCCAGACATAAATTTCATTGATCTAAAGTACACCAT  924

seq1  TAAATGTAGTTAAAAATCCCATTTACATTCAGTGTGATATCCCTGAAGCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTAGTTAAAAATCCCATTTACATTCAGTGTGATATCCCTGAAGCA  974

seq1  ATGACCTAGAACCTTAGTCATGTTCATATTCCGTGTCTTAGAAAAACATC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTAGAACCTTAGTCATGTTCATATTCCGTGTCTTAGAAAAACATC  1024

seq1  CACTGTGTCTCCACTAGCCGTCTTTCTAGCCATGTAATGAAGGGATTGTG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGTCTCCACTAGCCGTCTTTCTAGCCATGTAATGAAGGGATTGTG  1074

seq1  CCAACAGTACTCTCCTTCCCATCTTGCATTTTGTGATCAAACATGGAGGT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGTACTCTCCTTCCCATCTTGCATTTTGTGATCAAACATGGAGGT  1124

seq1  CCAGGAATTC  1155
      ||||||||||
seq2  CCAGGAATTC  1134