BAC Information

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BAC

Clone NameB6Ng01-056G07
Chromosome16 (Build37)
Map Location 60,914,850 - 61,015,743
singlet/doubletdoublet
Overlap genenone
Upstream geneEpha6, LOC100043804, EG668168, LOC668170
Downstream geneLOC100043524, LOC668183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056G07.bB6Ng01-056G07.g
ACCDH878563DH878564
length1,1441,106
definitionDH878563|Mus musculus domesticus DNA, BAC clone: B6Ng01-056G07, 5' end.DH878564|Mus musculus domesticus DNA, BAC clone: B6Ng01-056G07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,014,582 - 61,015,743)(60,914,850 - 60,915,959)
sequence
gaattcatgggtataaatttcaacatgaccaatgaataattcctaattat
cagaaagtataaaattattgaattaaccttctgctaatttgcttctatca
tgaataaaataactaatttattagttaaatgcaagttactttactgatat
gaaatatttgttatgaatcctcatttagtttaaaagatattgttttggag
gatcacttaattgcattgactgatgaagaatgccataactcccattgctg
cttacttcatgagccaggtatactttggtcatgaatatatatttaaaaaa
aaaaaactcttttacctcccctctctgttctatctctcacttttgcttat
tttaaattgaaattattttccaaataactacaaagaaaagttcattctgc
attaatgtgaaaagtttaagggacattttaagagagagtgatttctactt
tagttgtcattatggatattctatcttagaaactaaaatttaaaatgttc
ctcaatgtcacagtaaaagaattcacattaagtgaaagtggcagtgctag
gattgggaaagggtgtataaagaatggcactttggaatctcaatgggttg
catcgcatggacctgaactgaactgtgtgaactcatgttcatctgctgaa
attacatttccagcaccataagtgacagctctattagatacagtgctgat
caagaagtaactcagcaaaatgaggtcaattcttaagaatacatccagta
aaatctggagtcttttgagaagaacttagagcgatcatttgcaagggaca
tggaggccatatgagtaggagaagagaaagctgtatgtgaaggagaaagg
aatcacaagaaagaaccatattgcctcgtggacattacatcaatgaacaa
aagacctctgaatataacttacgtcctaaaggatgtattctactttacca
tggaagtatcactgctaaggaaggattatggatacatggacagttttgga
tatttatgcaatgacagggatctgtaatgcatatgtactacttcttaatt
aaatatttctatcagatgaagactagaaaataatgtaggggtaagagtga
ttgcatgatatttataaatccaattatataggttctttgaaaaa
gaattccaggtcagcctgatctatgtatcaatttccagtttaccaagggc
tatgtagtaacttcctctttttaaaaacaaagaagcacacaaacgagcaa
acaatcacaagcaaatgaacaacaactgaaattggatctctaatataatt
aaggcaggctgttgtaagctatcagatacgagatctgggaaaccagctct
atacacatttatctactgacccatctccctagacatatattaaggtagaa
ttaatacaataaggataattaatataaataaccaatgatatatccagaca
catgtcaaaatattgctacactgaaagacagtcccatgtctttttagggg
agtggagtgggcaacacttagcataaggtctgctgatgttaattgatttt
ttaacatacacctcctttgttcttgcacagtttgggagaggatgtcagat
cctttggaaatggagtaacaaatagctgtaattcctgaagacatttgtgc
cttttttgaatatttattggagttgaaggcacaagtttcagctgctaggt
tttatgataaaggtcatatggatgcattctttacacatgggcaagtttct
ttctgtaatggccatgtgtatgttcaaaaagttcatggccaatgttgcca
tagaaacaaggattgagtacatacttggtttcatcaacaggatactacac
ttataatgaactatttgattagaaccattgttgattagaaaaccactaaa
agcagagatcaccaatgatcaatcaatatggcaccattctggtcctggca
atgacagtcaattacagggaacattttcatttatcatcaagaagacagtt
ctatgatgtggatttactttctttgaacttaactgttttggcatgaagca
ttgcaggacagatacaatgtcttgcaatatgtaatcatggccttgagtaa
aatattgcttctgacgagggaacaaaatacattttatagccaatgagctg
agcaaccaactcaggcctaaaatttccattttgtggagaagtttggttga
aatagtacaaatgtatttatttaaataagatttacattttttcttgtttt
ttattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_61014582_61015743
seq2: B6Ng01-056G07.b_46_1189 (reverse)

seq1  TTTTTCAAAAGAACCTTATATAATTGATATTTCATTAAATATATGCATGG  50
      |||||| |||||||| ||||||||||  ||||   |||||||   ||| |
seq2  TTTTTC-AAAGAACC-TATATAATTG-GATTT--ATAAATAT---CAT-G  41

seq1  CAATCACTC-TACCCCTACATTTATTTTCTAGGTCTTTCATCTGATAGAA  99
      ||||||||| |||||||||| |||||||||| ||| ||||||||||||||
seq2  CAATCACTCTTACCCCTACA-TTATTTTCTA-GTC-TTCATCTGATAGAA  88

seq1  ATATTTACATTAAGAAGTAGTAACATATGCATGTACAGATCCCTTGTCAT  149
      ||||||| ||||||||||||| |||||||||| |||||||||| ||||| 
seq2  ATATTTA-ATTAAGAAGTAGT-ACATATGCAT-TACAGATCCC-TGTCA-  133

seq1  TTGCATAAATATCCAAAACTGTCCATGTATTCCATAATCCTTCCTTAGCA  199
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTGCATAAATATCCAAAACTGTCCATGTA-TCCATAATCCTTCCTTAGCA  182

seq1  GTGATACTTCCATGGTAAAGTAGAATACATTCTTTAGGACGTAAGTTATA  249
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTGATACTTCCATGGTAAAGTAGAATACATCCTTTAGGACGTAAGTTATA  232

seq1  TTCAGAGGTCTTTTGTTCATTGATGTAATGTCCACGAGGCAATATGGTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGGTCTTTTGTTCATTGATGTAATGTCCACGAGGCAATATGGTTC  282

seq1  TTTTCTTGTGATTCCTTTCTCCTTCACATACAGCTTTCTCTTCTCCTACT  349
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTCTTGTGATTCCTTTCTCCTTCACATACAGCTTTCTCTTCTCCTACT  331

seq1  CATATGGCCTCCATGTCCCTTGCAAATGATCGCTCTAAGTTCTTCTCAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGCCTCCATGTCCCTTGCAAATGATCGCTCTAAGTTCTTCTCAAA  381

seq1  AGACTCCAGATTTTACTGGATGTATTCTTAAGAATTGACCTCATTTTGCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCCAGATTTTACTGGATGTATTCTTAAGAATTGACCTCATTTTGCT  431

seq1  GAGTTACTTCTTGATCAGCACTGTATCTAATAGAGCTGTCACTTATGGTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTACTTCTTGATCAGCACTGTATCTAATAGAGCTGTCACTTATGGTG  481

seq1  CTGGAAATGTAATTTCAGCAGATGAACATGAGTTCACACAGTTCAGTTCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAATGTAATTTCAGCAGATGAACATGAGTTCACACAGTTCAGTTCA  531

seq1  GGTCCATGCGATGCAACCCATTGAGATTCCAAAGTGCCATTCTTTATACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCATGCGATGCAACCCATTGAGATTCCAAAGTGCCATTCTTTATACA  581

seq1  CCCTTTCCCAATCCTAGCACTGCCACTTTCACTTAATGTGAATTCTTTTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCCCAATCCTAGCACTGCCACTTTCACTTAATGTGAATTCTTTTA  631

seq1  CTGTGACATTGAGGAACATTTTAAATTTTAGTTTCTAAGATAGAATATCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACATTGAGGAACATTTTAAATTTTAGTTTCTAAGATAGAATATCC  681

seq1  ATAATGACAACTAAAGTAGAAATCACTCTCTCTTAAAATGTCCCTTAAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGACAACTAAAGTAGAAATCACTCTCTCTTAAAATGTCCCTTAAAC  731

seq1  TTTTCACATTAATGCAGAATGAACTTTTCTTTGTAGTTATTTGGAAAATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACATTAATGCAGAATGAACTTTTCTTTGTAGTTATTTGGAAAATA  781

seq1  ATTTCAATTTAAAATAAGCAAAAGTGAGAGATAGAACAGAGAGGGGAGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAATTTAAAATAAGCAAAAGTGAGAGATAGAACAGAGAGGGGAGGT  831

seq1  AAAAGAGTTTTTTTTTTTTAAATATATATTCATGACCAAAGTATACCTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGTTTTTTTTTTTTAAATATATATTCATGACCAAAGTATACCTGG  881

seq1  CTCATGAAGTAAGCAGCAATGGGAGTTATGGCATTCTTCATCAGTCAATG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAAGTAAGCAGCAATGGGAGTTATGGCATTCTTCATCAGTCAATG  931

seq1  CAATTAAGTGATCCTCCAAAACAATATCTTTTAAACTAAATGAGGATTCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAAGTGATCCTCCAAAACAATATCTTTTAAACTAAATGAGGATTCA  981

seq1  TAACAAATATTTCATATCAGTAAAGTAACTTGCATTTAACTAATAAATTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAATATTTCATATCAGTAAAGTAACTTGCATTTAACTAATAAATTA  1031

seq1  GTTATTTTATTCATGATAGAAGCAAATTAGCAGAAGGTTAATTCAATAAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTTATTCATGATAGAAGCAAATTAGCAGAAGGTTAATTCAATAAT  1081

seq1  TTTATACTTTCTGATAATTAGGAATTATTCATTGGTCATGTTGAAATTTA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACTTTCTGATAATTAGGAATTATTCATTGGTCATGTTGAAATTTA  1131

seq1  TACCCATGAATTC  1162
      |||||||||||||
seq2  TACCCATGAATTC  1144

seq1: chr16_60914850_60915959
seq2: B6Ng01-056G07.g_69_1174

seq1  GAATTCCAGGTCAGCCTGATCTATGTATCAATTTCCAGTTTACCAAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTCAGCCTGATCTATGTATCAATTTCCAGTTTACCAAGGGC  50

seq1  TATGTAGTAACTTCCTCTTTTTAAAAACAAAGAAGCACACAAACGAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGTAACTTCCTCTTTTTAAAAACAAAGAAGCACACAAACGAGCAA  100

seq1  ACAATCACAAGCAAATGAACAACAACTGAAATTGGATCTCTAATATAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCACAAGCAAATGAACAACAACTGAAATTGGATCTCTAATATAATT  150

seq1  AAGGCAGGCTGTTGTAAGCTATCAGATACGAGATCTGGGAAACCAGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGCTGTTGTAAGCTATCAGATACGAGATCTGGGAAACCAGCTCT  200

seq1  ATACACATTTATCTACTGACCCATCTCCCTAGACATATATTAAGGTAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACATTTATCTACTGACCCATCTCCCTAGACATATATTAAGGTAGAA  250

seq1  TTAATACAATAAGGATAATTAATATAAATAACCAATGATATATCCAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACAATAAGGATAATTAATATAAATAACCAATGATATATCCAGACA  300

seq1  CATGTCAAAATATTGCTACACTGAAAGACAGTCCCATGTCTTTTTAGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCAAAATATTGCTACACTGAAAGACAGTCCCATGTCTTTTTAGGGG  350

seq1  AGTGGAGTGGGCAACACTTAGCATAAGGTCTGCTGATGTTAATTGATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGTGGGCAACACTTAGCATAAGGTCTGCTGATGTTAATTGATTTT  400

seq1  TTAACATACACCTCCTTTGTTCTTGCACAGTTTGGGAGAGGATGTCAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATACACCTCCTTTGTTCTTGCACAGTTTGGGAGAGGATGTCAGAT  450

seq1  CCTTTGGAAATGGAGTAACAAATAGCTGTAATTCCTGAAGACATTTGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGAAATGGAGTAACAAATAGCTGTAATTCCTGAAGACATTTGTGC  500

seq1  CTTTTTTGAATATTTATTGGAGTTGAAGGCACAAGTTTCAGCTGCTAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTGAATATTTATTGGAGTTGAAGGCACAAGTTTCAGCTGCTAGGT  550

seq1  TTTATGATAAAGGTCATATGGATGCATTCTTTACACATGGGCAAGTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGATAAAGGTCATATGGATGCATTCTTTACACATGGGCAAGTTTCT  600

seq1  TTCTGTAATGGCCATGTGTATGTTCAAAAAGTTCATGGCCAATGTTGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAATGGCCATGTGTATGTTCAAAAAGTTCATGGCCAATGTTGCCA  650

seq1  TAGAAACAAGGATTGAGTACATACTTGG-TTCATCAACAGGATACTACAC  699
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAGAAACAAGGATTGAGTACATACTTGGTTTCATCAACAGGATACTACAC  700

seq1  TTATAATGAACTATTTGATTAGAACCATTGTTGATTAGAAAACCACTAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATGAACTATTTGATTAGAACCATTGTTGATTAGAAAACCACTAAA  750

seq1  AGCAGAGATCACCAATGATCAATCAATATGGCACCATTCTGGTCCTGGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGATCACCAATGATCAATCAATATGGCACCATTCTGGTCCTGGCA  800

seq1  ATGACAGTCAATTACAGGGAACATTTCCA-TTATCATCAAGAAGACAGTT  848
      |||||||||||||||||||||||||| || ||||||||||||||||||||
seq2  ATGACAGTCAATTACAGGGAACATTTTCATTTATCATCAAGAAGACAGTT  850

seq1  CTATGATGTGGATTTACTTTCTTTGAACTTAACTGTTTTGGCATGAAGCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGATGTGGATTTACTTTCTTTGAACTTAACTGTTTTGGCATGAAGCA  900

seq1  TTGCAGGACAGATACAATGTCTTGCATATTGTAATCATGGCCTTGAGTAA  948
      ||||||||||||||||||||||||||   |||||||||||||||||||||
seq2  TTGCAGGACAGATACAATGTCTTGCAATATGTAATCATGGCCTTGAGTAA  950

seq1  AATATTGCTTCTGACGAGGGAACAAAATACATTTTATAGCCAATGAGCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGCTTCTGACGAGGGAACAAAATACATTTTATAGCCAATGAGCTG  1000

seq1  AGGCAACCAACTCAGGCCTATAAATTTCATATTGTGGAGAAGTTTGTTTG  1048
      | |||||||||||||||||| || || ||| ||||||||||||||| |||
seq2  A-GCAACCAACTCAGGCCTAAAATTTCCATTTTGTGGAGAAGTTTGGTTG  1049

seq1  AGATAAGTACAAATGTATCTATTTAAATAAGATTTTACATTTTTTTCTTT  1098
      | || ||||||||||||| ||||||||||||| |||||| ||||||||| 
seq2  AAAT-AGTACAAATGTATTTATTTAAATAAGA-TTTACA-TTTTTTCTT-  1095

seq1  GTTTTTTTATTT  1110
        ||||||||||
seq2  -GTTTTTTATTT  1106