BAC Information

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BAC

Clone NameB6Ng01-056J21
Chromosome16 (Build37)
Map Location 28,466,837 - 28,579,380
singlet/doubletdoublet
Overlap geneFgf12
Upstream genenone
Downstream gene1600021P15Rik, EG666717, Hrasls, Atp13a5, Atp13a4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056J21.bB6Ng01-056J21.g
ACCDH878722DH878723
length6311,039
definitionDH878722|Mus musculus domesticus DNA, BAC clone: B6Ng01-056J21, 5' end.DH878723|Mus musculus domesticus DNA, BAC clone: B6Ng01-056J21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,578,750 - 28,579,380)(28,466,837 - 28,467,856)
sequence
gaattccctgcccacctggaaggtaaacatccgtgaaacacctgcccgtg
aagggttttctatgagttacaaagatcaatggttgggggaggggggcgga
gattcttttctgtagaggttagaattcgctatcgcagagtcacagttgaa
ggctgttcctaaggatgctcgctgtctacttccgtgggtacacgaggaga
aatggaagtcagcgctgtgggaagtgtgatgcgtttgtgttagtgattga
acttaacacacagtcaggtgtgaggacctgagagcaagtgctaggttagg
actcacaccttagaggattccatgctatgtgatttcttgggcgaaggtac
ttgacccgggcatcctgtataagtcaagagtgcagactgctgcttattgc
cagcgtcctaatccacatgaattcccatcaggctgataagcaggataccg
ccctcttgtcctggctcaatttaccggcgaggtagcttacgtgcttgaag
tttcaaaccctcctcttataatctccttctctgtctgccatttcctcacg
ctctcttcagaaacaagaatattgaatctttattttgttaattttaaata
tttttttattacgtatttcccctcagttaca
gaattcttcacactgctcatgagatgctccactgagcaccaggcagtgct
atttgcaaaacaccgggtcttacaagacagcatccttgactccggacttt
tgtcaccttgtactccaagacagaagccatctttaatgtatgccttctat
gttaaagcacctgatagttgcattaaaacttctcttaattagtttgccct
ttggacgttagcttcaagtagtcaattaaacaaaactatcaactccttat
ggaaatattcattaagcttcacattattttttaaagcaactaggggaaaa
tatagtaaagaaatgaatttgcttagcacacacacatataactaaatgtt
ggggagataaaacagtaaatgcttatgtttttctctacatgtctcacttc
atatatttagagcctgctaaattatttgtggacaattatacatgtataat
gacgttggataacagaccatacttctggccctttaccagtctcctttcct
tgacatttaaaaattgtgtgtaaaacaagaacagcatgacacaatgactc
tggaggtgcaatagtggcacccagctaccaacaggtctctaattagtctt
aaggcctgttccataagagggaaacccagccaactccccagaactagtga
acgcatgaatcttagagaaggatcaacaaccacgactttactaagacatc
ataattcatatgtgtatttttccttatacccagatgtaagaaaactcctc
actccccatcaaggaaaattatctttgcaacaagtatggaccattacaga
aagccataccaatcaagatgcaaagttgtggagctcagccccagctgatg
catctatccagcaattcctgcacacaaggctcaacatcacttctgaagag
ggcagaaagcttgcaagagccaggggatcaggagtttgctgtgagactgt
gtctcagaggaacacccatgaaataccatcagcataactgcttaaacatt
agctgagcaggatgacattaatatacatgctacatggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_28578750_28579380
seq2: B6Ng01-056J21.b_48_678 (reverse)

seq1  TGTAACTGA-GGGAAATACGTAATAAAAAAAATATTAAAAATTAAAAAAA  49
      ||||||||| |||||||||||||| ||||||||||| |||||||| ||||
seq2  TGTAACTGAGGGGAAATACGTAAT-AAAAAAATATTTAAAATTAACAAAA  49

seq1  AAAAGCTTCAATGTTCTTGTTTCTGAAGAGAGCCTGAGGGAAAGGCAGAC  99
       |||| |||||| |||||||||||||||||||| ||||| || |||||||
seq2  TAAAGATTCAATATTCTTGTTTCTGAAGAGAGCGTGAGGAAATGGCAGAC  99

seq1  AGAGAAGGAGATTATATGAGGAGGGTTTGAAACTTCATGCACGAAAGCTA  149
      |||||||||||||||| |||||||||||||||||||| ||||| ||||||
seq2  AGAGAAGGAGATTATAAGAGGAGGGTTTGAAACTTCAAGCACGTAAGCTA  149

seq1  CCTCGCCGGTAAACTGAGCCAGGACAAGAGGGCGGTATCCTGCTTCTCAG  199
      ||||||||||||| ||||||||||||||||||||||||||||||| ||||
seq2  CCTCGCCGGTAAATTGAGCCAGGACAAGAGGGCGGTATCCTGCTTATCAG  199

seq1  CCTGATGGGAATTCATGTGGATTAGGACGCTGGCAATAAGCAGCAGTCTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGGGAATTCATGTGGATTAGGACGCTGGCAATAAGCAGCAGTCTG  249

seq1  CACTCTTGACTTATACAGGATGCCCGGGTCAAGTACCTTCGCCCAAGAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTGACTTATACAGGATGCCCGGGTCAAGTACCTTCGCCCAAGAAA  299

seq1  TCACATAGCATGGAATCCTCTAAGGTGTGAGTCCTAACCTAGCACTTGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATAGCATGGAATCCTCTAAGGTGTGAGTCCTAACCTAGCACTTGCT  349

seq1  CTCAGGTCCTCACACCTGACTGTGTGTTAAGTTCAATCACTAACACAAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTCCTCACACCTGACTGTGTGTTAAGTTCAATCACTAACACAAAC  399

seq1  GCATCACACTTCCCACAGCGCTGACTTCCATTTCTCCTCGTGTACCCACG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCACACTTCCCACAGCGCTGACTTCCATTTCTCCTCGTGTACCCACG  449

seq1  GAAGTAGACAGCGAGCATCCTTAGGAACAGCCTTCAACTGTGACTCTGCG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGACAGCGAGCATCCTTAGGAACAGCCTTCAACTGTGACTCTGCG  499

seq1  ATAGCGAATTCTAACCTCTACAGAAAAGAATCTCCGCCCCCCTCCCCCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCGAATTCTAACCTCTACAGAAAAGAATCTCCGCCCCCCTCCCCCAA  549

seq1  CCATTGATCTTTGTAACTCATAGAAAACCCTTCACGGGCAGGTGTTTCAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGATCTTTGTAACTCATAGAAAACCCTTCACGGGCAGGTGTTTCAC  599

seq1  GGATGTTTACCTTCCAGGTGGGCAGGGAATTC  631
      ||||||||||||||||||||||||||||||||
seq2  GGATGTTTACCTTCCAGGTGGGCAGGGAATTC  631

seq1: chr16_28466837_28467856
seq2: B6Ng01-056J21.g_69_1084

seq1  GAATTCTTCACACTGCTCATGAGATGCTCCACTGAGCACCAGGCAGTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACACTGCTCATGAGATGCTCCACTGAGCACCAGGCAGTGCT  50

seq1  ATTTGCAAAACACCGGGTCTTACAAGACAGCATCCTTGACTCCGGACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAAAACACCGGGTCTTACAAGACAGCATCCTTGACTCCGGACTTT  100

seq1  TGTCACCTTGTACTCCAAGACAGAAGCCATCTTTAATGTATGCCTTCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCTTGTACTCCAAGACAGAAGCCATCTTTAATGTATGCCTTCTAT  150

seq1  GTTAAAGCACCTGATAGTTGCATTAAAACTTCTCTTAATTAGTTTGCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGCACCTGATAGTTGCATTAAAACTTCTCTTAATTAGTTTGCCCT  200

seq1  TTGGACGTTAGCTTCAAGTAGTCAATTAAACAAAACTATCAACTCCTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACGTTAGCTTCAAGTAGTCAATTAAACAAAACTATCAACTCCTTAT  250

seq1  GGAAATATTCATTAAGCTTCACATTATTTTTTAAAGCAACTAGGGGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATATTCATTAAGCTTCACATTATTTTTTAAAGCAACTAGGGGAAAA  300

seq1  TATAGTAAAGAAATGAATTTGCTTAGCACACACACATATAACTAAATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTAAAGAAATGAATTTGCTTAGCACACACACATATAACTAAATGTT  350

seq1  GGGGAGATAAAACAGTAAATGCTTATGTTTTTCTCTACATGTCTCACTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGATAAAACAGTAAATGCTTATGTTTTTCTCTACATGTCTCACTTC  400

seq1  ATATATTTAGAGCCTGCTAAATTATTTGTGGACAATTATACATGTATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTAGAGCCTGCTAAATTATTTGTGGACAATTATACATGTATAAT  450

seq1  GACGTTGGATAACAGACCATACTTCTGGCCCTTTACCAGTCTCCTTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTTGGATAACAGACCATACTTCTGGCCCTTTACCAGTCTCCTTTCCT  500

seq1  TGACATTTAAAAATTGTGTGTAAAACAAGAACAGCATGACACAATGACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTTAAAAATTGTGTGTAAAACAAGAACAGCATGACACAATGACTC  550

seq1  TGGAGGTGCAATAGTGGCACCCAGCTACCAACAGGTCTCTAATTAGTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTGCAATAGTGGCACCCAGCTACCAACAGGTCTCTAATTAGTCTT  600

seq1  AAGGCCTGTTCCATAAGAGGGAAACCCAGCCAACTCCCCAGAACTAGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTGTTCCATAAGAGGGAAACCCAGCCAACTCCCCAGAACTAGTGA  650

seq1  ACGCATGAATCTTAGAGAAGGATCAACAACCACGACTTTACTAAGACATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCATGAATCTTAGAGAAGGATCAACAACCACGACTTTACTAAGACATC  700

seq1  ATAATTCATATGTGTATTTTTCCTTATACCCAGATGTAAGAAAACTCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCATATGTGTATTTTTCCTTATACCCAGATGTAAGAAAACTCCTC  750

seq1  ACTCCCCATCAAGGAAAATTATCTTTGCAACAAGTATGGACCATTACAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCATCAAGGAAAATTATCTTTGCAACAAGTATGGACCATTACAGA  800

seq1  AAGCCATACCAATCAAGATGCAAAGTTGTGGAGCTCAGCCCCAGCTGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATACCAATCAAGATGCAAAGTTGTGGAGCTCAGCCCCAGCTGATG  850

seq1  CATCTATCCAGCAATTCCTGCACACAAGGCTCAACATCACTTCTGAAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATCCAGCAATTCCTGCACACAAGGCTCAACATCACTTCTGAAGAG  900

seq1  GGCAGAAAGCTTGCAAGAGCCAGGGGATCAGGGAGTTTGCTGTGAGACTG  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGCAGAAAGCTTGCAAGAGCCAGGGGATCA-GGAGTTTGCTGTGAGACTG  949

seq1  TGTCTTCAGGAGGAACACCCATGAAATACCATCAGCATAACTGCTTAAAC  1000
      |||| ||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGTC-TCA-GAGGAACACCCATGAAATACCATCAGCATAACTGCTTAAAC  997

seq1  ATTAGCTGAGCCAGGATGAC  1020
      |||||||||| |||||||||
seq2  ATTAGCTGAG-CAGGATGAC  1016