BAC Information

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BAC

Clone NameB6Ng01-057D19
Chromosome16 (Build37)
Map Location 58,147,940 - 58,148,966
singlet/doubletsinglet
Overlap geneLOC100043477
Upstream geneTomm70a, Nit2, Tbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480, LOC629342
Downstream geneDcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057D19.bB6Ng01-057D19.g
ACCDH879166DH879167
length9331,023
definitionDH879166|Mus musculus domesticus DNA, BAC clone: B6Ng01-057D19, 5' end.DH879167|Mus musculus domesticus DNA, BAC clone: B6Ng01-057D19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaaaacttttatcctgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggatttttgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
attgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttttcaaagaaccaactcctcgtttggttaattctttga
atagttctttttgtttccacttggttgatttcacccctgagtttgattat
tttcttgccgtctactcatctggggtgaatttgctttcatttttttctaa
gggctttcagacgtgttgtaagctgtaatttgg
gaattcatcaccaggttaatccattagttcgtgattgattcaattgcttc
ttaatgattagacctatcaaatctgttttctgaaggaacattgcatatcc
aaagcagaacaggtaagaaggtgatatgattctatttgcttaacaataga
gtgttgctataggcacgaaagaacgtaacacaacttaagagggtctacct
ttcactaagacaaaatgatcttaattggctacgtactggtggaggttcag
gatattgcgattacataggtgaggaaattacagtgatggggtctctggaa
agagggcatgatatgactggtgagtcctagaaagcacacactggcagtgt
ctgggtctcagaatgataccccacagtgggcacgtggctttcgagagaag
cgacaggacatgggctccttgtttagagcaaagtaaccatgtgcacagtg
catagccttgactcaggggttgtgaggctccagggtcctccaggagcaaa
gattctaagtctctgcagttttaatagaggccgtttggttgccttccact
tactttttcctttcaggagacatccttcttggttccaaggactttgtaat
ggaagagttggcgcagtggcggcagaggattttgtttcccttctctgtgc
gttctgagtttcccggatccagagtagctttgtcaccttcactggaccct
gaatgctccttcggatgctccagtggtagaacaagtgtgtattcactgtt
tcaatcttttctgtgagggggagtaggcatttttgttttctgggaagaca
tcttgctcttctgtccagccagcgatcatttctatatcacttaggaaaag
agaaagcatgtgagtcaagtctttactttttagaaagaatttaaagttta
agggaaacaccaagagaaataaagtcatagatcttaattactagagagag
gcaacagactatctttatacagcaagctgggggacagacatttcaaaacg
tattcttttaacaaaacaaaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58147940_58148966
seq2: B6Ng01-057D19.g_68_1090 (reverse)

seq1  GATTTTGTTTTGTTTAAAGAATGCGTTTTGAAATGTCTGT-CCCCAGCTT  49
      |||||||||||||| ||||||| ||||||||||||||||| |||||||||
seq2  GATTTTGTTTTGTTAAAAGAATACGTTTTGAAATGTCTGTCCCCCAGCTT  50

seq1  GCTGTATTAAAGTAGTCTGTTGCCTCTCTTCTAGTAATTAAGATCTTATG  99
      ||||||| ||  |||||||||||||||| |||||||||||||||| ||||
seq2  GCTGTATAAAGATAGTCTGTTGCCTCTC-TCTAGTAATTAAGATC-TATG  98

seq1  ACTTTTATTTCTTCTTGGTGTTTCCCTTAAAACTTTAAATTCTTTCTAAA  149
      || |||||||| |||||||||||||||| |||||||||||||||||||||
seq2  AC-TTTATTTC-TCTTGGTGTTTCCCTT-AAACTTTAAATTCTTTCTAAA  145

seq1  AAGTAAAGACTTGACTCACATGCTTTCTCTTTTCCTAAGTGATATAGAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAGACTTGACTCACATGCTTTCTCTTTTCCTAAGTGATATAGAAA  195

seq1  TGATCGCTGGCTGGACAGAAGAGCAAGATGTCTTCCAAGAAAAACAAAAT  249
      |||||||||||||||||||||||||||||||||||| ||||||  |||||
seq2  TGATCGCTGGCTGGACAGAAGAGCAAGATGTCTTCCCAGAAAACAAAAAT  245

seq1  GCCTACTCCCCCTCACAGAAAAGATTGAAACAGTGAATACACACTTGTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACTCCCCCTCACAGAAAAGATTGAAACAGTGAATACACACTTGTTC  295

seq1  TACCACTGGAGCATCCGAAGGAGCATTCAGGGTCCAGTGAAGGTGACAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACTGGAGCATCCGAAGGAGCATTCAGGGTCCAGTGAAGGTGACAAA  345

seq1  GCTACTCTGGATCCGGGAAACTCAGAACGCACAGAGAAGGGAAACAAAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTCTGGATCCGGGAAACTCAGAACGCACAGAGAAGGGAAACAAAAT  395

seq1  CCTCTGCCGCCACTGCGCCAACTCTTCCATTACAAAGTCCTTGGAACCAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCGCCACTGCGCCAACTCTTCCATTACAAAGTCCTTGGAACCAA  445

seq1  GAAGGATGTCTCCTGAAAGGAAAAAGTAAGTGGAAGGCAACCAAACGGCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATGTCTCCTGAAAGGAAAAAGTAAGTGGAAGGCAACCAAACGGCC  495

seq1  TCTATTAAAACTGCAGAGACTTAGAATCTTTGCTCCTGGAGGACCCTGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTAAAACTGCAGAGACTTAGAATCTTTGCTCCTGGAGGACCCTGGA  545

seq1  GCCTCACAACCCCTGAGTCAAGGCTATGCACTGTGCACATGGTTACTTTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACAACCCCTGAGTCAAGGCTATGCACTGTGCACATGGTTACTTTG  595

seq1  CTCTAAACAAGGAGCCCATGTCCTGTCGCTTCTCTCGAAAGCCACGTGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAACAAGGAGCCCATGTCCTGTCGCTTCTCTCGAAAGCCACGTGCC  645

seq1  CACTGTGGGGTATCATTCTGAGACCCAGACACTGCCAGTGTGTGCTTTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGGGGTATCATTCTGAGACCCAGACACTGCCAGTGTGTGCTTTCT  695

seq1  AGGACTCACCAGTCATATCATGCCCTCTTTCCAGAGACCCCATCACTGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCACCAGTCATATCATGCCCTCTTTCCAGAGACCCCATCACTGTA  745

seq1  ATTTCCTCACCTATGTAATCGCAATATCCTGAACCTCCACCAGTACGTAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTCACCTATGTAATCGCAATATCCTGAACCTCCACCAGTACGTAG  795

seq1  CCAATTAAGATCATTTTGTCTTAGTGAAAGGTAGACCCTCTTAAGTTGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTAAGATCATTTTGTCTTAGTGAAAGGTAGACCCTCTTAAGTTGTG  845

seq1  TTACGTTCTTTCGTGCCTATAGCAACACTCTATTGTTAAGCAAATAGAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGTTCTTTCGTGCCTATAGCAACACTCTATTGTTAAGCAAATAGAAT  895

seq1  CATATCACCTTCTTACCTGTTCTGCTTTGGATATGCAATGTTCCTTCAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCACCTTCTTACCTGTTCTGCTTTGGATATGCAATGTTCCTTCAGA  945

seq1  AAACAGATTTGATAGGTCTAATCATTAAGAAGCAATTGAATCAATCACGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATTTGATAGGTCTAATCATTAAGAAGCAATTGAATCAATCACGA  995

seq1  ACTAATGGATTAACCTGGTGATGAATTC  1027
      ||||||||||||||||||||||||||||
seq2  ACTAATGGATTAACCTGGTGATGAATTC  1023