BAC Information

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BAC

Clone NameB6Ng01-057E23
Chromosome16 (Build37)
Map Location 21,978,805 - 22,115,527
singlet/doubletdoublet
Overlap geneLiph, Senp2, EG239760, Igf2bp2
Upstream geneLOC625123, LOC676915, 2310042E22Rik, Ephb3, 6430590I03Rik, Vps8, 2510009E07Rik, Ehhadh, LOC100043489, LOC546659, Map3k13, LOC624037, Tmem41a
Downstream geneEG545152, EG666421, Sfrs10, LOC100043507, Etv5, Dgkg, LOC671242, LOC666459, Crygs, Tbccd1, Dnajb11, Ahsg, Fetub, Hrg, Kng2, LOC624311, LOC666486, LOC666489, Kng1, LOC666493, Eif4a2, Rfc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057E23.bB6Ng01-057E23.g
ACCDH879218DH879219
length931688
definitionDH879218|Mus musculus domesticus DNA, BAC clone: B6Ng01-057E23, 5' end.DH879219|Mus musculus domesticus DNA, BAC clone: B6Ng01-057E23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,114,590 - 22,115,527)(21,978,805 - 21,979,491)
sequence
gaattcattccacagatgcttctgcctctggtcagcagagaggtgtggag
caggtgcccatgggtgaaatggatagcaggtgggggagacaaggtatgac
caagaaggggctgagtaagaaggtctgtaccagaaaattgaaaaagctca
aaggaggcagataaaggtcgtgaagagaggccaggagttgagttagtgtg
agtaggcacttagaagtttgacaaaagttaggaggataatcaagatggct
ccctggtcctgagctggggatggtgggaaaaagattctgctgctgtttga
ttacatgtaatgggggtattggtctttagaagacaggattttaaattgag
gtgctggagacaatggctgtgccctgctagatttggactagacagctgcc
tgagttttcttgacaccatggctcagtgagctccccagaacagtttattt
tgggagatgataattaattttttttaaacaagggatatgtgaattgactt
ttctccagagatagttttgtactgtcttttctatatcttacccagtgtca
ttgattttcctaacacaaggcctgatacctagagacagtagaagatagaa
ataggggttagacttggagagagggagagagttcctgaggaagctggctg
tctccaccagtcacagctggcactagggatgccatgttagcccaggagct
caaatgttggaaaggtagtccctccactgacagtgttcagtttggtgaga
aacctctgagcagcacggtgaagcggaaagtgtccctttttctcgtggcc
ttgggtatttttggtgatgtgactaatagtcacacagcataatgcttaag
tgctttcctctcacgagctcaccctacactttctcaggggaatgagagaa
ctataccctgtcccttctattgaaaggaagc
gaattcaaaactaatctgggcttcagagctacatcttgtctcaagaagat
aaaacaagacaaaactggatcattgatggcttagtaggtaaaggctcctg
acaccaagcctgacaccctgcgttcaatcccaggacctacagggtgtaag
gagagacccgactcctgtaaattgtcctctaactttcatatgcttagtgt
gccacaccccacacatatatacacatacaaaacatatagaacaaaaattt
aaaaaataaaaatattctatattttaattaaaattatttaatgtctaatt
ataaaaagataaaatagtactcaaaaattaaaaataaacaaaacaaaacc
agccaggtatggtagatcacacttgtagccccagcacttaggagtctgag
gcaggaggattggcataaacttaaggccagtctgagtttagtgagtttct
aggtcagcctgggctacagagtaaaaccctgcttcaacacaacaaaacaa
acaaacaaaataattcatcttgtttaaccagcatatctaaaaattgttgt
gccaatacattcactaataaatgtgagatttgattctctttcttttttcc
tctttctgaaccttcgtcttcaaaagccagtgcttatgttgcacctaaac
agcctatctcagtctgcactggcttcaagtgtccagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_22114590_22115527
seq2: B6Ng01-057E23.b_47_976 (reverse)

seq1  CTTCCTTTTCAGTAAAGAAGGGACAGGGATATAAGATCTCTCATTCACCT  50
      ||||| |||||  | ||||||||||||| ||| || |||||||||| |||
seq2  CTTCC-TTTCA--ATAGAAGGGACAGGG-TAT-AGTTCTCTCATTCCCCT  45

seq1  GAGAAAGTGTAGGGCTGAGGCTCGTGAGAGGGAATGCACTTAAGCATTAT  100
      |||||||||||||| ||| |||||||||| |||| |||||||||||||||
seq2  GAGAAAGTGTAGGG-TGA-GCTCGTGAGA-GGAAAGCACTTAAGCATTAT  92

seq1  GCTGTGTGACCTATTAGTCACTATCACC-AAAATACCCAAGGCCACGAG-  148
      ||||||||| ||||||||||| |||||| |||||||||||||||||||| 
seq2  GCTGTGTGA-CTATTAGTCAC-ATCACCAAAAATACCCAAGGCCACGAGA  140

seq1  AAAAGGGACACTTTCCGCTTCACCGTGCTGCTCAGAGGTTTCTCACCAAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGACACTTTCCGCTTCACCGTGCTGCTCAGAGGTTTCTCACCAAA  190

seq1  CTGAACACTGTCAGTGGAGGGACTACCTTTCCAACATTTGAGCTCCTGGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACACTGTCAGTGGAGGGACTACCTTTCCAACATTTGAGCTCCTGGG  240

seq1  CTAACATGGCATCCCTAGTGCCAGCTGTGACTGGTGGAGACAGCCAGCTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATGGCATCCCTAGTGCCAGCTGTGACTGGTGGAGACAGCCAGCTT  290

seq1  CCTCAGGAACTCTCTCCCTCTCTCCAAGTCTAACCCCTATTTCTATCTTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGAACTCTCTCCCTCTCTCCAAGTCTAACCCCTATTTCTATCTTC  340

seq1  TACTGTCTCTAGGTATCAGGCCTTGTGTTAGGAAAATCAATGACACTGGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCTCTAGGTATCAGGCCTTGTGTTAGGAAAATCAATGACACTGGG  390

seq1  TAAGATATAGAAAAGACAGTACAAAACTATCTCTGGAGAAAAGTCAATTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATATAGAAAAGACAGTACAAAACTATCTCTGGAGAAAAGTCAATTC  440

seq1  ACATATCCCTTGTTTAAAAAAAATTAATTATCATCTCCCAAAATAAACTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCCCTTGTTTAAAAAAAATTAATTATCATCTCCCAAAATAAACTG  490

seq1  TTCTGGGGAGCTCACTGAGCCATGGTGTCAAGAAAACTCAGGCAGCTGTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGGAGCTCACTGAGCCATGGTGTCAAGAAAACTCAGGCAGCTGTC  540

seq1  TAGTCCAAATCTAGCAGGGCACAGCCATTGTCTCCAGCACCTCAATTTAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCAAATCTAGCAGGGCACAGCCATTGTCTCCAGCACCTCAATTTAA  590

seq1  AATCCTGTCTTCTAAAGACCAATACCCCCATTACATGTAATCAAACAGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGTCTTCTAAAGACCAATACCCCCATTACATGTAATCAAACAGCA  640

seq1  GCAGAATCTTTTTCCCACCATCCCCAGCTCAGGACCAGGGAGCCATCTTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATCTTTTTCCCACCATCCCCAGCTCAGGACCAGGGAGCCATCTTG  690

seq1  ATTATCCTCCTAACTTTTGTCAAACTTCTAAGTGCCTACTCACACTAACT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCTCCTAACTTTTGTCAAACTTCTAAGTGCCTACTCACACTAACT  740

seq1  CAACTCCTGGCCTCTCTTCACGACCTTTATCTGCCTCCTTTGAGCTTTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCTGGCCTCTCTTCACGACCTTTATCTGCCTCCTTTGAGCTTTTT  790

seq1  CAATTTTCTGGTACAGACCTTCTTACTCAGCCCCTTCTTGGTCATACCTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTCTGGTACAGACCTTCTTACTCAGCCCCTTCTTGGTCATACCTT  840

seq1  GTCTCCCCCACCTGCTATCCATTTCACCCATGGGCACCTGCTCCACACCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCCCCACCTGCTATCCATTTCACCCATGGGCACCTGCTCCACACCT  890

seq1  CTCTGCTGACCAGAGGCAGAAGCATCTGTGGAATGAATTC  938
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTGACCAGAGGCAGAAGCATCTGTGGAATGAATTC  930

seq1: chr16_21978805_21979491
seq2: B6Ng01-057E23.g_67_754

seq1  GAATTCAAAACTAATCTGGGCTTCAGAGCTACATCTTGTCTCAAGAAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAACTAATCTGGGCTTCAGAGCTACATCTTGTCTCAAGAAGAT  50

seq1  AAAACAAGACAAAACTGGATCATTGATGGCTTAGTAGGTAAAGGCTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAGACAAAACTGGATCATTGATGGCTTAGTAGGTAAAGGCTCCTG  100

seq1  ACACCAAGCCTGACACCCTGCGTTCAATCCCAGGACCTACAGGGTGTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAAGCCTGACACCCTGCGTTCAATCCCAGGACCTACAGGGTGTAAG  150

seq1  GAGAGACCCGACTCCTGTAAATTGTCCTCTAACTTTCATATGCTTAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACCCGACTCCTGTAAATTGTCCTCTAACTTTCATATGCTTAGTGT  200

seq1  GCCACACCCCACACATATATACACATACAAAACATATAGAACAAAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACCCCACACATATATACACATACAAAACATATAGAACAAAAATTT  250

seq1  AAAAAATAAAAATATTCTATATTTTAATTAAAATTATTTAATGTCTAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAAAAATATTCTATATTTTAATTAAAATTATTTAATGTCTAATT  300

seq1  ATAAAAAGATAAAATAGTACTCAAAAATTAAAAATAAACAAAACAAAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGATAAAATAGTACTCAAAAATTAAAAATAAACAAAACAAAACC  350

seq1  AGCCAGGTATGGTAGATCACACTTGTAGCCCCAGCACTTAGGAGTCTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGTATGGTAGATCACACTTGTAGCCCCAGCACTTAGGAGTCTGAG  400

seq1  GCAGGAGGATTGGCATAAACTTAAGGCCAGTCTGAGTTTAGTGAGTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGGATTGGCATAAACTTAAGGCCAGTCTGAGTTTAGTGAGTTTCT  450

seq1  AGGTCAGCCTGGGCTACAGAGTAAAACCCTGCTTCAACACAACAAAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGCCTGGGCTACAGAGTAAAACCCTGCTTCAACACAACAAAACAA  500

seq1  ACAAACAAAATAATTCATCTTGTTTAACCAGCATATCTAAAAATTGTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAAATAATTCATCTTGTTTAACCAGCATATCTAAAAATTGTTGT  550

seq1  GCCAATACATTCACTAATAAATGTGAGATTTGATTCTCTTTCTTTTTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATACATTCACTAATAAATGTGAGATTTGATTCTCTTTCTTTTTTCC  600

seq1  TCTTTCTGAACCTTCGTCTTCAAAAGCCAGTGCTTATGTTGCACCT-AAC  649
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCTTTCTGAACCTTCGTCTTCAAAAGCCAGTGCTTATGTTGCACCTAAAC  650

seq1  AGCCTATCTCAGTCTGCACTGGCTTCAAGTGTCCAGTG  687
      ||||||||||||||||||||||||||||||||||||||
seq2  AGCCTATCTCAGTCTGCACTGGCTTCAAGTGTCCAGTG  688