BAC Information

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BAC

Clone NameB6Ng01-058B21
Chromosome16 (Build37)
Map Location 15,184,868 - 15,185,832
singlet/doubletsinglet
Overlap genenone
Upstream geneNde1, Myh11, 0610037P05Rik, Abcc1, Gm1758, Snai2, Efcab1, LOC100042737
Downstream geneLOC665653, LOC385748, LOC100042743, LOC547302, EG632352, Ube2v2, LOC665682, Mcm4, Prkdc, 2410018G20Rik, Cebpd, 2310008H04Rik, LOC100043266, LOC224010
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058B21.bB6Ng01-058B21.g
ACCDH879783DH879784
length1,150964
definitionDH879783|Mus musculus domesticus DNA, BAC clone: B6Ng01-058B21, 5' end.DH879784|Mus musculus domesticus DNA, BAC clone: B6Ng01-058B21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatattgatcctgccagtccatgagcatgggagatcttttccatc
ttctgagatcttctttaatttctttcttcagagacttgaagtttttatca
tacagatctttcacttccttagttagagtcacgccgagatatttatatta
tttgttgactattgaggacggtgttgtttccctaatttctttttaagctg
tttattctttgtgtagagaaaggccattgacttgtttgagttaatttata
tcagctactttcccggagcctgtttcagcttgaagtctccgggtgaattt
taggtacttattatactatcaatatctggatatgagataatgtactactc

gaattctaaaacaagaaccaagccattcacttaactttgcattaagaagt
ttgaagacactttcccccagccacagtcatgtacaagagtaatataaagg
gctctcgagccatctgcacctatacaagtacaagagaaagtctctacaga
gtgtgtaggaaatcactgtgtaagacccaaaagttaacctgtaagcccca
cctgtccaaggaccaggtaacttcttggaatactgggagatgcagtcctt
ggaaaagaacaaagccatgtgggcaaatacagtggctcaattcatttatc
cttaagtagcccctacaacatgtcttgttgctattcagctggaaattcca
gagagtggtcctgaccaaagataatgctggtcagtatttaattaaccttg
cttcaaatttggatcaaaatgatggagcctgatattcccttgtgaatctc
agaattaacaagttctcagataccactgagctatttggcatatggagtag
gctctgcatcagagctatgagaccaacagaagcccatggcctgggaggct
gtagagagcatggcagcccttagtgtctcttcattcattcctgtattcat
ggtagagccaagagagaaaagataagaaagtcaacctgcacacagggtgg
gggagaaagccagatgggacagggggtattgggacagcagttctatctgc
tttctggaggtccagttaccaacaatcaatcatatcttaaatttttaaat
ggaaacttccaaaaacagggccagcccaaagtttagtgcttgccttgaaa
gttcaagacctgagctttgtcccttgaacctacactttaaaatcatctaa
gatactggtatgctcatattaatcccaagcttggattccctagccagcca
gcctagccaggttggtgaattccaggctgatcttgtatacccaagatgtt
ctttggcctccaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_15184868_15185832
seq2: B6Ng01-058B21.g_66_1029

seq1  GAATTCTAAAACAAGAACCAAGCCATTCACTTAACTTTGCATTAAGAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAACAAGAACCAAGCCATTCACTTAACTTTGCATTAAGAAGT  50

seq1  TTGAAGACACTTTCCCCCAGCCACAGTCATGTACAAGAGTAATATAAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGACACTTTCCCCCAGCCACAGTCATGTACAAGAGTAATATAAAGG  100

seq1  GCTCTCGAGCCATCTGCACCTATACAAGTACAAGAGAAAGTCTCTACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCGAGCCATCTGCACCTATACAAGTACAAGAGAAAGTCTCTACAGA  150

seq1  GTGTGTAGGAAATCACTGTGTAAGACCCAAAAGTTAACCTGTAAGCCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTAGGAAATCACTGTGTAAGACCCAAAAGTTAACCTGTAAGCCCCA  200

seq1  CCTGTCCAAGGACCAGGTAACTTCTTGGAATACTGGGAGATGCAGTCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCAAGGACCAGGTAACTTCTTGGAATACTGGGAGATGCAGTCCTT  250

seq1  GGAAAAGAACAAAGCCATGTGGGCAAATACAGTGGCTCAATTCATTTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGAACAAAGCCATGTGGGCAAATACAGTGGCTCAATTCATTTATC  300

seq1  CTTAAGTAGCCCCTACAACATGTCTTGTTGCTATTCAGCTGGAAATTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTAGCCCCTACAACATGTCTTGTTGCTATTCAGCTGGAAATTCCA  350

seq1  GAGAGTGGTCCTGACCAAAGATAATGCTGGTCAGTATTTAATTAACCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGGTCCTGACCAAAGATAATGCTGGTCAGTATTTAATTAACCTTG  400

seq1  CTTCAAATTTGGATCAAAATGATGGAGCCTGATATTCCCTTGTGAATCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAATTTGGATCAAAATGATGGAGCCTGATATTCCCTTGTGAATCTC  450

seq1  AGAATTAACAAGTTCTCAGATACCACTGAGCTATTTGGCATATGGAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAACAAGTTCTCAGATACCACTGAGCTATTTGGCATATGGAGTAG  500

seq1  GCTCTGCATCAGAGCTATGAGACCAACAGAAGCCCATGGCCTGGGAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCATCAGAGCTATGAGACCAACAGAAGCCCATGGCCTGGGAGGCT  550

seq1  GTAGAGAGCATGGCAGCCCTTAGTGTCTCTTCATTCATTCCTGTATTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGAGCATGGCAGCCCTTAGTGTCTCTTCATTCATTCCTGTATTCAT  600

seq1  GGTAGAGCCAAGAGAGAAAAGATAAGAAAGTCAACCTGCACACAGGGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGCCAAGAGAGAAAAGATAAGAAAGTCAACCTGCACACAGGGTGG  650

seq1  GGGAGAAAGCCAGATGGGACAGGGGGTATTGGGACAGCAGTTCTATCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAAGCCAGATGGGACAGGGGGTATTGGGACAGCAGTTCTATCTGC  700

seq1  TTTCTGGAGGTCCAGTTACCAACAATCAATCATATCTTAAATTTTTAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGAGGTCCAGTTACCAACAATCAATCATATCTTAAATTTTTAAAT  750

seq1  GGAAACTTCCAAAAACAGGGCCAGCCAAAAGTTTAGTGCTTGCCTTGAAA  800
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGAAACTTCCAAAAACAGGGCCAGCCCAAAGTTTAGTGCTTGCCTTGAAA  800

seq1  GTTCAAAGACCTGAGCTTTGTCCCTTGAACCTACACTTTAAAATCATCTA  850
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTC-AAGACCTGAGCTTTGTCCCTTGAACCTACACTTTAAAATCATCTA  849

seq1  AGATACTGGTATGCTCATA-TAATCCCAAAGCTTGGATTCCCTAGCCAGC  899
      ||||||||||||||||||| ||||||| ||||||||||||||||||||||
seq2  AGATACTGGTATGCTCATATTAATCCC-AAGCTTGGATTCCCTAGCCAGC  898

seq1  CAGCCTAGCCAGGTTGGTGAATTCCAGGCTGATCCTGTATACCCAAGATG  949
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAGCCTAGCCAGGTTGGTGAATTCCAGGCTGATCTTGTATACCCAAGATG  948

seq1  TTCTTTGGCCTCCAAA  965
      ||||||||||||||||
seq2  TTCTTTGGCCTCCAAA  964